RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 DENND2AQ9ULE3 1009 aa20.08■□□□□ 0.81
USB1-206ENST00000562534 GMPSP49915 693 aaPredicted RBP20.07■□□□□ 0.8
USB1-206ENST00000562534 TBC1D22AQ8WUA7 517 aa20.07■□□□□ 0.8
USB1-206ENST00000562534 ZNF512BQ96KM6 892 aaPredicted RBP20.07■□□□□ 0.8
USB1-206ENST00000562534 DBNDD2Q9BQY9 259 aa20.07■□□□□ 0.8
USB1-206ENST00000562534 HACL1Q9UJ83 578 aa20.07■□□□□ 0.8
USB1-206ENST00000562534 IQSEC3Q9UPP2 1182 aaPredicted RBP20.07■□□□□ 0.8
USB1-206ENST00000562534 ZBTB12Q9Y330 459 aaPredicted RBP20.07■□□□□ 0.8
USB1-206ENST00000562534 TIAM2Q8IVF5 1701 aa20.07■□□□□ 0.8
USB1-206ENST00000562534 H7C1D1 291 aa20.06■□□□□ 0.8
USB1-206ENST00000562534 ZNF609O15014 1411 aa20.06■□□□□ 0.8
USB1-206ENST00000562534 SMC5Q8IY18 1101 aa20.06■□□□□ 0.8
USB1-206ENST00000562534 WDR66Q8TBY9 1149 aa20.06■□□□□ 0.8
USB1-206ENST00000562534 GPRC5DQ9NZD1 345 aa20.06■□□□□ 0.8
USB1-206ENST00000562534 CNOT7Q9UIV1 285 aaKnown RBP20.06■□□□□ 0.8
USB1-206ENST00000562534 DBNLQ9UJU6 430 aaKnown RBP20.06■□□□□ 0.8
USB1-206ENST00000562534 POTECB2RU33 542 aa20.05■□□□□ 0.8
USB1-206ENST00000562534 SCNN1DP51172 638 aa20.05■□□□□ 0.8
USB1-206ENST00000562534 TTC39AQ5SRH9 613 aa20.05■□□□□ 0.8
USB1-206ENST00000562534 ANKRD45Q5TZF3 282 aa20.05■□□□□ 0.8
USB1-206ENST00000562534 OGFOD1Q8N543 542 aa20.05■□□□□ 0.8
USB1-206ENST00000562534 GMLQ99445 158 aa20.05■□□□□ 0.8
USB1-206ENST00000562534 BCL11AQ9H165 835 aa20.05■□□□□ 0.8
USB1-206ENST00000562534 SMARCA5O60264 1052 aaPredicted RBP20.04■□□□□ 0.8
USB1-206ENST00000562534 USP17L8P0C7I0 530 aa20.04■□□□□ 0.8
USB1-206ENST00000562534 ARID4AP29374 1257 aaPredicted RBP20.04■□□□□ 0.8
USB1-206ENST00000562534 CHAF1AQ13111 956 aaPredicted RBP20.04■□□□□ 0.8
USB1-206ENST00000562534 MFSD14BQ5SR56 506 aa20.04■□□□□ 0.8
USB1-206ENST00000562534 ERICH6BQ5W0A0 696 aa20.04■□□□□ 0.8
USB1-206ENST00000562534 NMRK2Q9NPI5 230 aa20.04■□□□□ 0.8
USB1-206ENST00000562534 PNMA8AQ86V59 439 aaPredicted RBP20.03■□□□□ 0.8
USB1-206ENST00000562534 HDAC9Q9UKV0 1011 aa20.03■□□□□ 0.8
USB1-206ENST00000562534 SUGT1Q9Y2Z0 365 aa20.03■□□□□ 0.8
USB1-206ENST00000562534 PDS5AQ29RF7 1337 aaKnown RBP20.02■□□□□ 0.8
USB1-206ENST00000562534 EPHX2P34913 555 aa20.02■□□□□ 0.8
USB1-206ENST00000562534 EPS15P42566 896 aa20.02■□□□□ 0.8
USB1-206ENST00000562534 RASGRF1Q13972 1273 aa20.02■□□□□ 0.8
USB1-206ENST00000562534 MICALL2Q8IY33 904 aa20.02■□□□□ 0.8
USB1-206ENST00000562534 ZGPATQ8N5A5 531 aaKnown RBP20.02■□□□□ 0.8
USB1-206ENST00000562534 SPATA5Q8NB90 893 aa20.02■□□□□ 0.8
USB1-206ENST00000562534 MXD3Q9BW11 206 aa20.02■□□□□ 0.8
USB1-206ENST00000562534 TAF1DQ9H5J8 278 aaPredicted RBP20.02■□□□□ 0.8
USB1-206ENST00000562534 ADARB2Q9NS39 739 aaKnown RBP20.02■□□□□ 0.8
USB1-206ENST00000562534 TLR7Q9NYK1 1049 aaKnown RBP20.02■□□□□ 0.8
USB1-206ENST00000562534 JAG2Q9Y219 1238 aa20.02■□□□□ 0.8
USB1-206ENST00000562534 SCN9AQ15858 1988 aa20.01■□□□□ 0.79
USB1-206ENST00000562534 USP50Q70EL3 339 aaPredicted RBP20.01■□□□□ 0.79
USB1-206ENST00000562534 CERS5Q8N5B7 392 aa20.01■□□□□ 0.79
USB1-206ENST00000562534 HMG20BQ9P0W2 317 aa20.01■□□□□ 0.79
USB1-206ENST00000562534 WDR90Q96KV7 1748 aa20■□□□□ 0.79
USB1-206ENST00000562534 ZNF280AP59817 542 aaPredicted RBP20■□□□□ 0.79
USB1-206ENST00000562534 SPTY2D1Q68D10 685 aaPredicted RBP20■□□□□ 0.79
USB1-206ENST00000562534 KIAA0825Q8IV33 1275 aa20■□□□□ 0.79
USB1-206ENST00000562534 C16orf71Q8IYS4 520 aaPredicted RBP20■□□□□ 0.79
USB1-206ENST00000562534 GPATCH3Q96I76 525 aa20■□□□□ 0.79
USB1-206ENST00000562534 MRIQ9BWK5 157 aa20■□□□□ 0.79
USB1-206ENST00000562534 SALL1Q9NSC2 1324 aa20■□□□□ 0.79
USB1-206ENST00000562534 MCAMP43121 646 aa19.99■□□□□ 0.79
USB1-206ENST00000562534 B4GALNT3Q6L9W6 998 aa19.99■□□□□ 0.79
USB1-206ENST00000562534 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.99■□□□□ 0.79
USB1-206ENST00000562534 KIF3CO14782 793 aa19.98■□□□□ 0.79
USB1-206ENST00000562534 IGSF3O75054 1194 aa19.98■□□□□ 0.79
USB1-206ENST00000562534 ATP5JP18859 108 aa19.98■□□□□ 0.79
USB1-206ENST00000562534 NUCB1Q02818 461 aa19.98■□□□□ 0.79
USB1-206ENST00000562534 ECHDC1Q9NTX5 307 aa19.98■□□□□ 0.79
USB1-206ENST00000562534 ARAP2Q8WZ64 1704 aa19.97■□□□□ 0.79
USB1-206ENST00000562534 F8W031 263 aaPredicted RBP19.97■□□□□ 0.79
USB1-206ENST00000562534 LDHBP07195 334 aaKnown RBP19.97■□□□□ 0.79
USB1-206ENST00000562534 HDLBPQ00341 1268 aaKnown RBP19.97■□□□□ 0.79
USB1-206ENST00000562534 SCARF1Q14162 830 aa19.97■□□□□ 0.79
USB1-206ENST00000562534 CHD1LQ86WJ1 897 aa19.97■□□□□ 0.79
USB1-206ENST00000562534 MYOZ2Q9NPC6 264 aa19.97■□□□□ 0.79
USB1-206ENST00000562534 TTF2Q9UNY4 1162 aaKnown RBP19.97■□□□□ 0.79
USB1-206ENST00000562534 SCN4AP35499 1836 aa19.97■□□□□ 0.79
USB1-206ENST00000562534 PSME4Q14997 1843 aa19.97■□□□□ 0.79
USB1-206ENST00000562534 RBM26Q5T8P6 1007 aaKnown RBP19.96■□□□□ 0.79
USB1-206ENST00000562534 SAMD7Q7Z3H4 446 aa19.96■□□□□ 0.79
USB1-206ENST00000562534 SNRKQ9NRH2 765 aa19.96■□□□□ 0.79
USB1-206ENST00000562534 ABCF2Q9UG63 623 aa19.96■□□□□ 0.79
USB1-206ENST00000562534 MAST3O60307 1309 aa19.96■□□□□ 0.79
USB1-206ENST00000562534 SHTN1A0MZ66 631 aa19.95■□□□□ 0.78
USB1-206ENST00000562534 TOMM70O94826 608 aa19.95■□□□□ 0.78
USB1-206ENST00000562534 TBC1D10BQ4KMP7 808 aaPredicted RBP19.95■□□□□ 0.78
USB1-206ENST00000562534 EAPPQ56P03 285 aaPredicted RBP19.95■□□□□ 0.78
USB1-206ENST00000562534 ERICH6Q7L0X2 663 aa19.95■□□□□ 0.78
USB1-206ENST00000562534 ZC3H15Q8WU90 426 aaKnown RBP19.95■□□□□ 0.78
USB1-206ENST00000562534 CCDC136Q96JN2 1154 aa19.95■□□□□ 0.78
USB1-206ENST00000562534 SERPINA10Q9UK55 444 aa19.95■□□□□ 0.78
USB1-206ENST00000562534 CLEC11AQ9Y240 323 aa19.95■□□□□ 0.78
USB1-206ENST00000562534 TTC41PQ6P2S7 1318 aa19.95■□□□□ 0.78
USB1-206ENST00000562534 ERC2O15083 957 aa19.94■□□□□ 0.78
USB1-206ENST00000562534 CYP2E1P05181 493 aaPredicted RBP19.94■□□□□ 0.78
USB1-206ENST00000562534 ZAP70P43403 619 aa19.94■□□□□ 0.78
USB1-206ENST00000562534 TTF1Q15361 905 aaPredicted RBP19.94■□□□□ 0.78
USB1-206ENST00000562534 DLGAP5Q15398 846 aa19.94■□□□□ 0.78
USB1-206ENST00000562534 KIF4BQ2VIQ3 1234 aa19.94■□□□□ 0.78
USB1-206ENST00000562534 PI16Q6UXB8 463 aa19.94■□□□□ 0.78
USB1-206ENST00000562534 SLF2Q8IX21 1173 aa19.94■□□□□ 0.78
USB1-206ENST00000562534 MTMR14Q8NCE2 650 aa19.94■□□□□ 0.78
USB1-206ENST00000562534 LNPKQ9C0E8 428 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms