RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 PUM3Q15397 648 aaKnown RBP22.24■■□□□ 1.15
CMTM3-204ENST00000562357 DLGAP5Q15398 846 aa22.24■■□□□ 1.15
CMTM3-204ENST00000562357 NBPF9Q3BBW0 867 aa22.24■■□□□ 1.15
CMTM3-204ENST00000562357 LRRFIP2Q9Y608 721 aaKnown RBP22.24■■□□□ 1.15
CMTM3-204ENST00000562357 ZBED9Q6R2W3 1325 aa22.24■■□□□ 1.15
CMTM3-204ENST00000562357 F8W031 263 aaPredicted RBP22.23■■□□□ 1.15
CMTM3-204ENST00000562357 BCAR3O75815 825 aa22.23■■□□□ 1.15
CMTM3-204ENST00000562357 DLK2Q6UY11 383 aa22.23■■□□□ 1.15
CMTM3-204ENST00000562357 APOBEC3FQ8IUX4 373 aaKnown RBP22.23■■□□□ 1.15
CMTM3-204ENST00000562357 TDRD7Q8NHU6 1098 aaKnown RBP22.23■■□□□ 1.15
CMTM3-204ENST00000562357 FAM84BQ96KN1 310 aaPredicted RBP22.23■■□□□ 1.15
CMTM3-204ENST00000562357 MEIS3Q99687 375 aa22.23■■□□□ 1.15
CMTM3-204ENST00000562357 FBXO3Q9UK99 471 aa22.23■■□□□ 1.15
CMTM3-204ENST00000562357 JAG2Q9Y219 1238 aa22.23■■□□□ 1.15
CMTM3-204ENST00000562357 MYO1BO43795 1136 aa22.22■■□□□ 1.15
CMTM3-204ENST00000562357 TRIM27P14373 513 aa22.22■■□□□ 1.15
CMTM3-204ENST00000562357 NF2P35240 595 aa22.22■■□□□ 1.15
CMTM3-204ENST00000562357 MAP2K2P36507 400 aa22.22■■□□□ 1.15
CMTM3-204ENST00000562357 ZKSCAN2Q63HK3 967 aa22.22■■□□□ 1.15
CMTM3-204ENST00000562357 FAM205AQ6ZU69 1335 aa22.22■■□□□ 1.15
CMTM3-204ENST00000562357 SLC5A1P13866 664 aa22.21■■□□□ 1.15
CMTM3-204ENST00000562357 RFX5P48382 616 aaPredicted RBP22.21■■□□□ 1.15
CMTM3-204ENST00000562357 CTCFP49711 727 aaPredicted RBP22.21■■□□□ 1.15
CMTM3-204ENST00000562357 PTPN12Q05209 780 aaKnown RBP22.21■■□□□ 1.15
CMTM3-204ENST00000562357 MFSD14BQ5SR56 506 aa22.21■■□□□ 1.15
CMTM3-204ENST00000562357 CERS5Q8N5B7 392 aa22.21■■□□□ 1.15
CMTM3-204ENST00000562357 VGLL2Q8N8G2 317 aa22.21■■□□□ 1.15
CMTM3-204ENST00000562357 WBP1LQ9NX94 342 aa22.21■■□□□ 1.15
CMTM3-204ENST00000562357 CIAO1O76071 339 aa22.2■■□□□ 1.14
CMTM3-204ENST00000562357 RBM5P52756 815 aaKnown RBP eCLIP22.2■■□□□ 1.14
CMTM3-204ENST00000562357 FKBP1BP68106 108 aa22.2■■□□□ 1.14
CMTM3-204ENST00000562357 CLUAP1Q96AJ1 413 aa22.2■■□□□ 1.14
CMTM3-204ENST00000562357 SIL1Q9H173 461 aa22.2■■□□□ 1.14
CMTM3-204ENST00000562357 FOXN1O15353 648 aa22.19■■□□□ 1.14
CMTM3-204ENST00000562357 NOGQ13253 232 aa22.19■■□□□ 1.14
CMTM3-204ENST00000562357 RGMBQ6NW40 437 aa22.19■■□□□ 1.14
CMTM3-204ENST00000562357 FBXO33Q7Z6M2 555 aa22.19■■□□□ 1.14
CMTM3-204ENST00000562357 TBC1D22AQ8WUA7 517 aa22.19■■□□□ 1.14
CMTM3-204ENST00000562357 LPIN2Q92539 896 aa22.19■■□□□ 1.14
CMTM3-204ENST00000562357 CEP126Q9P2H0 1117 aa22.19■■□□□ 1.14
CMTM3-204ENST00000562357 ZNF646O15015 1829 aaPredicted RBP22.19■■□□□ 1.14
CMTM3-204ENST00000562357 PCNTO95613 3336 aa22.18■■□□□ 1.14
CMTM3-204ENST00000562357 CHAF1AQ13111 956 aaPredicted RBP22.18■■□□□ 1.14
CMTM3-204ENST00000562357 CFAP100Q494V2 611 aa22.18■■□□□ 1.14
CMTM3-204ENST00000562357 FTSJ3Q8IY81 847 aaKnown RBP22.18■■□□□ 1.14
CMTM3-204ENST00000562357 MTMR14Q8NCE2 650 aa22.18■■□□□ 1.14
CMTM3-204ENST00000562357 CCDC102AQ96A19 550 aa22.18■■□□□ 1.14
CMTM3-204ENST00000562357 AOC2O75106 756 aa22.17■■□□□ 1.14
CMTM3-204ENST00000562357 IL15P40933 162 aaPredicted RBP22.17■■□□□ 1.14
CMTM3-204ENST00000562357 ZNF157P51786 506 aaPredicted RBP22.17■■□□□ 1.14
CMTM3-204ENST00000562357 TTLL12Q14166 644 aaPredicted RBP22.17■■□□□ 1.14
CMTM3-204ENST00000562357 COL13A1Q5TAT6 717 aaPredicted RBP22.17■■□□□ 1.14
CMTM3-204ENST00000562357 TTF2Q9UNY4 1162 aaKnown RBP22.17■■□□□ 1.14
CMTM3-204ENST00000562357 SCAF8Q9UPN6 1271 aaKnown RBP22.17■■□□□ 1.14
CMTM3-204ENST00000562357 IQSEC3Q9UPP2 1182 aaPredicted RBP22.17■■□□□ 1.14
CMTM3-204ENST00000562357 POLR2AP24928 1970 aaKnown RBP22.17■■□□□ 1.14
CMTM3-204ENST00000562357 SRGAP3O43295 1099 aa22.16■■□□□ 1.14
CMTM3-204ENST00000562357 GNAI2P04899 355 aa22.16■■□□□ 1.14
CMTM3-204ENST00000562357 FGFR2P21802 821 aa22.16■■□□□ 1.14
CMTM3-204ENST00000562357 ZBED3Q96IU2 234 aaPredicted RBP22.16■■□□□ 1.14
CMTM3-204ENST00000562357 THSD7BQ9C0I4 1608 aa22.16■■□□□ 1.14
CMTM3-204ENST00000562357 SPDYE2BA6NHP3 402 aa22.15■■□□□ 1.14
CMTM3-204ENST00000562357 SPDYE6P0CI01 402 aa22.15■■□□□ 1.14
CMTM3-204ENST00000562357 BCAMP50895 628 aa22.15■■□□□ 1.14
CMTM3-204ENST00000562357 ATP2B3Q16720 1220 aa22.15■■□□□ 1.14
CMTM3-204ENST00000562357 ATG9AQ7Z3C6 839 aa22.15■■□□□ 1.14
CMTM3-204ENST00000562357 COPRSQ9NQ92 184 aa22.15■■□□□ 1.14
CMTM3-204ENST00000562357 SERPINA10Q9UK55 444 aa22.15■■□□□ 1.14
CMTM3-204ENST00000562357 COL1A1P02452 1464 aaPredicted RBP22.15■■□□□ 1.14
CMTM3-204ENST00000562357 CA12O43570 354 aa22.14■■□□□ 1.13
CMTM3-204ENST00000562357 TNS4Q8IZW8 715 aa22.14■■□□□ 1.13
CMTM3-204ENST00000562357 VEZTQ9HBM0 779 aa22.14■■□□□ 1.13
CMTM3-204ENST00000562357 PRDM10Q9NQV6 1147 aa22.14■■□□□ 1.13
CMTM3-204ENST00000562357 GNL3LQ9NVN8 582 aaKnown RBP22.14■■□□□ 1.13
CMTM3-204ENST00000562357 PA2G4Q9UQ80 394 aaKnown RBP22.14■■□□□ 1.13
CMTM3-204ENST00000562357 PPP2R3BQ9Y5P8 575 aa22.14■■□□□ 1.13
CMTM3-204ENST00000562357 PAPPA2Q9BXP8 1791 aa22.13■■□□□ 1.13
CMTM3-204ENST00000562357 MTX1Q13505 466 aa22.13■■□□□ 1.13
CMTM3-204ENST00000562357 PRAMEF18Q5VWM3 479 aa22.13■■□□□ 1.13
CMTM3-204ENST00000562357 TMEM57Q8N5G2 664 aa22.13■■□□□ 1.13
CMTM3-204ENST00000562357 MAST3O60307 1309 aa22.12■■□□□ 1.13
CMTM3-204ENST00000562357 CLRN2A0PK11 232 aa22.12■■□□□ 1.13
CMTM3-204ENST00000562357 TNFAIP1Q13829 316 aa22.12■■□□□ 1.13
CMTM3-204ENST00000562357 ARMC9Q7Z3E5 817 aa22.12■■□□□ 1.13
CMTM3-204ENST00000562357 DEFB129Q9H1M3 183 aa22.12■■□□□ 1.13
CMTM3-204ENST00000562357 TNNQ9UQP3 1299 aa22.12■■□□□ 1.13
CMTM3-204ENST00000562357 LBX1P52954 281 aa22.11■■□□□ 1.13
CMTM3-204ENST00000562357 DZIP1LQ8IYY4 767 aaKnown RBP22.11■■□□□ 1.13
CMTM3-204ENST00000562357 PRMT6Q96LA8 375 aaPredicted RBP22.11■■□□□ 1.13
CMTM3-204ENST00000562357 SUGT1Q9Y2Z0 365 aa22.11■■□□□ 1.13
CMTM3-204ENST00000562357 SLC10A3P09131 477 aa22.1■■□□□ 1.13
CMTM3-204ENST00000562357 CRKP46108 304 aa22.1■■□□□ 1.13
CMTM3-204ENST00000562357 ITPRIPQ8IWB1 547 aa22.1■■□□□ 1.13
CMTM3-204ENST00000562357 WDR66Q8TBY9 1149 aa22.1■■□□□ 1.13
CMTM3-204ENST00000562357 AKAP2Q9Y2D5 859 aa22.1■■□□□ 1.13
CMTM3-204ENST00000562357 HSPA8P11142 646 aaKnown RBP22.09■■□□□ 1.13
CMTM3-204ENST00000562357 HDLBPQ00341 1268 aaKnown RBP22.09■■□□□ 1.13
CMTM3-204ENST00000562357 SUPT20HL1Q3ZLR7 823 aa22.09■■□□□ 1.13
CMTM3-204ENST00000562357 TEKT1Q969V4 418 aa22.09■■□□□ 1.13
CMTM3-204ENST00000562357 PCDHAC2Q9Y5I4 1007 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms