RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 COA1Q9GZY4 146 aa10.43□□□□□ -0.74
GINS3-204ENST00000561952 POTEMA6NI47 508 aa10.42□□□□□ -0.74
GINS3-204ENST00000561952 F8W031 263 aaPredicted RBP10.42□□□□□ -0.74
GINS3-204ENST00000561952 ALDH1L1O75891 902 aa10.42□□□□□ -0.74
GINS3-204ENST00000561952 NBPF7P0C2Y1 421 aaPredicted RBP10.42□□□□□ -0.74
GINS3-204ENST00000561952 NBPF9Q3BBW0 867 aa10.42□□□□□ -0.74
GINS3-204ENST00000561952 PRAMEF18Q5VWM3 479 aa10.42□□□□□ -0.74
GINS3-204ENST00000561952 TTLL5Q6EMB2 1281 aa10.42□□□□□ -0.74
GINS3-204ENST00000561952 LDHAL6AQ6ZMR3 332 aa10.42□□□□□ -0.74
GINS3-204ENST00000561952 C2orf69Q8N8R5 385 aa10.42□□□□□ -0.74
GINS3-204ENST00000561952 SSH1Q8WYL5 1049 aa10.42□□□□□ -0.74
GINS3-204ENST00000561952 ZIC5Q96T25 663 aa10.42□□□□□ -0.74
GINS3-204ENST00000561952 GMLQ99445 158 aa10.42□□□□□ -0.74
GINS3-204ENST00000561952 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.42□□□□□ -0.74
GINS3-204ENST00000561952 CASP8AP2Q9UKL3 1982 aa10.42□□□□□ -0.74
GINS3-204ENST00000561952 ZNF609O15014 1411 aa10.41□□□□□ -0.74
GINS3-204ENST00000561952 ZNF157P51786 506 aaPredicted RBP10.41□□□□□ -0.74
GINS3-204ENST00000561952 TTLL12Q14166 644 aaPredicted RBP10.41□□□□□ -0.74
GINS3-204ENST00000561952 STRIP1Q5VSL9 837 aa10.41□□□□□ -0.74
GINS3-204ENST00000561952 OGFOD1Q8N543 542 aa10.41□□□□□ -0.74
GINS3-204ENST00000561952 CD209Q9NNX6 404 aa10.41□□□□□ -0.74
GINS3-204ENST00000561952 PRDM10Q9NQV6 1147 aa10.41□□□□□ -0.74
GINS3-204ENST00000561952 SMC4Q9NTJ3 1288 aa10.41□□□□□ -0.74
GINS3-204ENST00000561952 AKAP11Q9UKA4 1901 aa10.41□□□□□ -0.74
GINS3-204ENST00000561952 ECM29Q5VYK3 1845 aa10.4□□□□□ -0.74
GINS3-204ENST00000561952 MYO3BQ8WXR4 1341 aa10.4□□□□□ -0.74
GINS3-204ENST00000561952 PAPPA2Q9BXP8 1791 aa10.4□□□□□ -0.74
GINS3-204ENST00000561952 SLFN5Q08AF3 891 aa10.4□□□□□ -0.74
GINS3-204ENST00000561952 RGMBQ6NW40 437 aa10.4□□□□□ -0.74
GINS3-204ENST00000561952 MOB2Q70IA6 237 aa10.4□□□□□ -0.74
GINS3-204ENST00000561952 ZNF804AQ7Z570 1209 aa10.4□□□□□ -0.74
GINS3-204ENST00000561952 PHF12Q96QT6 1004 aa10.4□□□□□ -0.74
GINS3-204ENST00000561952 PUS3Q9BZE2 481 aaKnown RBP10.4□□□□□ -0.74
GINS3-204ENST00000561952 BICC1Q9H694 974 aaKnown RBP10.4□□□□□ -0.74
GINS3-204ENST00000561952 HDAC9Q9UKV0 1011 aa10.4□□□□□ -0.74
GINS3-204ENST00000561952 PCDHAC2Q9Y5I4 1007 aa10.4□□□□□ -0.74
GINS3-204ENST00000561952 PTPRCP08575 1304 aa10.39□□□□□ -0.75
GINS3-204ENST00000561952 WNT10BO00744 389 aa10.39□□□□□ -0.75
GINS3-204ENST00000561952 MAP2K2P36507 400 aa10.39□□□□□ -0.75
GINS3-204ENST00000561952 PRKG1Q13976 671 aa10.39□□□□□ -0.75
GINS3-204ENST00000561952 KLHDC4Q8TBB5 520 aa10.39□□□□□ -0.75
GINS3-204ENST00000561952 KAZALD1Q96I82 304 aa10.39□□□□□ -0.75
GINS3-204ENST00000561952 HHIPL1Q96JK4 782 aa10.39□□□□□ -0.75
GINS3-204ENST00000561952 MYH13Q9UKX3 1938 aa10.39□□□□□ -0.75
GINS3-204ENST00000561952 ARAP2Q8WZ64 1704 aa10.38□□□□□ -0.75
GINS3-204ENST00000561952 IRS2Q9Y4H2 1338 aa10.38□□□□□ -0.75
GINS3-204ENST00000561952 GYG1P46976 350 aa10.38□□□□□ -0.75
GINS3-204ENST00000561952 RBM5P52756 815 aaKnown RBP eCLIP10.38□□□□□ -0.75
GINS3-204ENST00000561952 BRPF1P55201 1214 aaPredicted RBP10.38□□□□□ -0.75
GINS3-204ENST00000561952 MKRN3Q13064 507 aaKnown RBP10.38□□□□□ -0.75
GINS3-204ENST00000561952 NOGQ13253 232 aa10.38□□□□□ -0.75
GINS3-204ENST00000561952 LRRC24Q50LG9 513 aa10.38□□□□□ -0.75
GINS3-204ENST00000561952 POTEGQ6S5H5 508 aa10.38□□□□□ -0.75
GINS3-204ENST00000561952 CERS5Q8N5B7 392 aa10.38□□□□□ -0.75
GINS3-204ENST00000561952 PCDH10Q9P2E7 1040 aa10.38□□□□□ -0.75
GINS3-204ENST00000561952 IQSEC3Q9UPP2 1182 aaPredicted RBP10.38□□□□□ -0.75
GINS3-204ENST00000561952 PITPNM2Q9BZ72 1349 aa10.37□□□□□ -0.75
GINS3-204ENST00000561952 CLRN2A0PK11 232 aa10.37□□□□□ -0.75
GINS3-204ENST00000561952 FAM155AB1AL88 458 aaPredicted RBP10.37□□□□□ -0.75
GINS3-204ENST00000561952 UBE2Q2LH0YL09 131 aa10.37□□□□□ -0.75
GINS3-204ENST00000561952 KIF23Q02241 960 aaPredicted RBP10.37□□□□□ -0.75
GINS3-204ENST00000561952 DLGAP5Q15398 846 aa10.37□□□□□ -0.75
GINS3-204ENST00000561952 METTL24Q5JXM2 366 aa10.37□□□□□ -0.75
GINS3-204ENST00000561952 ANKRD44Q8N8A2 993 aa10.37□□□□□ -0.75
GINS3-204ENST00000561952 VEZTQ9HBM0 779 aa10.37□□□□□ -0.75
GINS3-204ENST00000561952 FZD1Q9UP38 647 aa10.37□□□□□ -0.75
GINS3-204ENST00000561952 SLC10A3P09131 477 aa10.36□□□□□ -0.75
GINS3-204ENST00000561952 IL1R1P14778 569 aa10.36□□□□□ -0.75
GINS3-204ENST00000561952 CHAF1AQ13111 956 aaPredicted RBP10.36□□□□□ -0.75
GINS3-204ENST00000561952 CFAP100Q494V2 611 aa10.36□□□□□ -0.75
GINS3-204ENST00000561952 VPS37DQ86XT2 251 aa10.36□□□□□ -0.75
GINS3-204ENST00000561952 RASAL3Q86YV0 1011 aa10.36□□□□□ -0.75
GINS3-204ENST00000561952 APOBEC3FQ8IUX4 373 aaKnown RBP10.36□□□□□ -0.75
GINS3-204ENST00000561952 CCDC102AQ96A19 550 aa10.36□□□□□ -0.75
GINS3-204ENST00000561952 UTYO14607 1347 aa10.35□□□□□ -0.75
GINS3-204ENST00000561952 AOX1Q06278 1338 aa10.35□□□□□ -0.75
GINS3-204ENST00000561952 MROH5Q6ZUA9 1318 aa10.35□□□□□ -0.75
GINS3-204ENST00000561952 SPDYE4A6NLX3 237 aa10.35□□□□□ -0.75
GINS3-204ENST00000561952 CCER2I3L3R5 266 aa10.35□□□□□ -0.75
GINS3-204ENST00000561952 FRAT2O75474 233 aaPredicted RBP10.35□□□□□ -0.75
GINS3-204ENST00000561952 HIBADHP31937 336 aaKnown RBP10.35□□□□□ -0.75
GINS3-204ENST00000561952 NF2P35240 595 aa10.35□□□□□ -0.75
GINS3-204ENST00000561952 ALDH1L2Q3SY69 923 aa10.35□□□□□ -0.75
GINS3-204ENST00000561952 MFSD14BQ5SR56 506 aa10.35□□□□□ -0.75
GINS3-204ENST00000561952 C15orf52Q6ZUT6 534 aaKnown RBP10.35□□□□□ -0.75
GINS3-204ENST00000561952 USP44Q9H0E7 712 aa10.35□□□□□ -0.75
GINS3-204ENST00000561952 NOB1Q9ULX3 412 aaKnown RBP10.35□□□□□ -0.75
GINS3-204ENST00000561952 RIPOR2Q9Y4F9 1068 aa10.35□□□□□ -0.75
GINS3-204ENST00000561952 CA12O43570 354 aa10.34□□□□□ -0.75
GINS3-204ENST00000561952 TRPA1O75762 1119 aa10.34□□□□□ -0.75
GINS3-204ENST00000561952 UBE4AQ14139 1066 aa10.34□□□□□ -0.75
GINS3-204ENST00000561952 RABL6Q3YEC7 729 aaPredicted RBP10.34□□□□□ -0.75
GINS3-204ENST00000561952 ABHD8Q96I13 439 aa10.34□□□□□ -0.75
GINS3-204ENST00000561952 FAM84BQ96KN1 310 aaPredicted RBP10.34□□□□□ -0.75
GINS3-204ENST00000561952 SIL1Q9H173 461 aa10.34□□□□□ -0.75
GINS3-204ENST00000561952 TTF2Q9UNY4 1162 aaKnown RBP10.34□□□□□ -0.75
GINS3-204ENST00000561952 MYO1BO43795 1136 aa10.33□□□□□ -0.76
GINS3-204ENST00000561952 UBTFL1P0CB47 393 aaPredicted RBP10.33□□□□□ -0.76
GINS3-204ENST00000561952 C7P10643 843 aa10.33□□□□□ -0.76
GINS3-204ENST00000561952 FKBP1BP68106 108 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms