RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 CIAO1O76071 339 aa29.73■■■□□ 2.35
CDR2-202ENST00000561630 PUM3Q15397 648 aaKnown RBP29.73■■■□□ 2.35
CDR2-202ENST00000561630 FGFR2P21802 821 aa29.72■■■□□ 2.35
CDR2-202ENST00000561630 JAG2Q9Y219 1238 aa29.72■■■□□ 2.35
CDR2-202ENST00000561630 TRPM7Q96QT4 1865 aa29.72■■■□□ 2.35
CDR2-202ENST00000561630 MTX1Q13505 466 aa29.71■■■□□ 2.35
CDR2-202ENST00000561630 CAVIN4Q5BKX8 364 aa29.71■■■□□ 2.35
CDR2-202ENST00000561630 VPS37DQ86XT2 251 aa29.71■■■□□ 2.35
CDR2-202ENST00000561630 TMEM57Q8N5G2 664 aa29.71■■■□□ 2.35
CDR2-202ENST00000561630 ZBED3Q96IU2 234 aaPredicted RBP29.71■■■□□ 2.35
CDR2-202ENST00000561630 SIL1Q9H173 461 aa29.71■■■□□ 2.35
CDR2-202ENST00000561630 HHIPL1Q96JK4 782 aa29.7■■■□□ 2.35
CDR2-202ENST00000561630 COPRSQ9NQ92 184 aa29.7■■■□□ 2.35
CDR2-202ENST00000561630 WDR33Q9C0J8 1336 aaKnown RBP29.7■■■□□ 2.34
CDR2-202ENST00000561630 IFIT1P09914 478 aaKnown RBP29.69■■■□□ 2.34
CDR2-202ENST00000561630 GNAI2P04899 355 aa29.68■■■□□ 2.34
CDR2-202ENST00000561630 HSPA1AP0DMV8 641 aaKnown RBP29.68■■■□□ 2.34
CDR2-202ENST00000561630 HSPA1BP0DMV9 641 aaKnown RBP29.68■■■□□ 2.34
CDR2-202ENST00000561630 LPIN2Q92539 896 aa29.68■■■□□ 2.34
CDR2-202ENST00000561630 CAPNS2Q96L46 248 aa29.68■■■□□ 2.34
CDR2-202ENST00000561630 PA2G4Q9UQ80 394 aaKnown RBP29.68■■■□□ 2.34
CDR2-202ENST00000561630 SRGAP3O43295 1099 aa29.67■■■□□ 2.34
CDR2-202ENST00000561630 IL15P40933 162 aaPredicted RBP29.67■■■□□ 2.34
CDR2-202ENST00000561630 ECE1P42892 770 aa29.67■■■□□ 2.34
CDR2-202ENST00000561630 MFSD14BQ5SR56 506 aa29.67■■■□□ 2.34
CDR2-202ENST00000561630 CYP4F22Q6NT55 531 aa29.67■■■□□ 2.34
CDR2-202ENST00000561630 PAXIP1Q6ZW49 1069 aaPredicted RBP29.67■■■□□ 2.34
CDR2-202ENST00000561630 MTMR14Q8NCE2 650 aa29.67■■■□□ 2.34
CDR2-202ENST00000561630 CDCA5Q96FF9 252 aa29.67■■■□□ 2.34
CDR2-202ENST00000561630 CEP126Q9P2H0 1117 aa29.67■■■□□ 2.34
CDR2-202ENST00000561630 F8W031 263 aaPredicted RBP29.66■■■□□ 2.34
CDR2-202ENST00000561630 BCAMP50895 628 aa29.66■■■□□ 2.34
CDR2-202ENST00000561630 DLGAP5Q15398 846 aa29.66■■■□□ 2.34
CDR2-202ENST00000561630 FTSJ3Q8IY81 847 aaKnown RBP29.66■■■□□ 2.34
CDR2-202ENST00000561630 GBA2Q9HCG7 927 aaPredicted RBP29.66■■■□□ 2.34
CDR2-202ENST00000561630 SLC5A1P13866 664 aa29.65■■■□□ 2.34
CDR2-202ENST00000561630 DZIP1LQ8IYY4 767 aaKnown RBP29.65■■■□□ 2.34
CDR2-202ENST00000561630 C2orf69Q8N8R5 385 aa29.65■■■□□ 2.34
CDR2-202ENST00000561630 SCAF8Q9UPN6 1271 aaKnown RBP29.64■■■□□ 2.34
CDR2-202ENST00000561630 IQSEC3Q9UPP2 1182 aaPredicted RBP29.64■■■□□ 2.34
CDR2-202ENST00000561630 FRAT2O75474 233 aaPredicted RBP29.63■■■□□ 2.33
CDR2-202ENST00000561630 HUNKP57058 714 aa29.63■■■□□ 2.33
CDR2-202ENST00000561630 POLR2AP24928 1970 aaKnown RBP29.63■■■□□ 2.33
CDR2-202ENST00000561630 RLBP1P12271 317 aa29.62■■■□□ 2.33
CDR2-202ENST00000561630 ATP2B3Q16720 1220 aa29.62■■■□□ 2.33
CDR2-202ENST00000561630 CFAP100Q494V2 611 aa29.62■■■□□ 2.33
CDR2-202ENST00000561630 SPDYE2BA6NHP3 402 aa29.61■■■□□ 2.33
CDR2-202ENST00000561630 SPDYE6P0CI01 402 aa29.61■■■□□ 2.33
CDR2-202ENST00000561630 GRM1Q13255 1194 aa29.61■■■□□ 2.33
CDR2-202ENST00000561630 TBC1D22AQ8WUA7 517 aa29.61■■■□□ 2.33
CDR2-202ENST00000561630 WBP1LQ9NX94 342 aa29.61■■■□□ 2.33
CDR2-202ENST00000561630 CHAF1AQ13111 956 aaPredicted RBP29.6■■■□□ 2.33
CDR2-202ENST00000561630 APOBEC3FQ8IUX4 373 aaKnown RBP29.6■■■□□ 2.33
CDR2-202ENST00000561630 TTF2Q9UNY4 1162 aaKnown RBP29.6■■■□□ 2.33
CDR2-202ENST00000561630 PCDHAC2Q9Y5I4 1007 aa29.6■■■□□ 2.33
CDR2-202ENST00000561630 ITPRIPQ8IWB1 547 aa29.59■■■□□ 2.33
CDR2-202ENST00000561630 PRMT6Q96LA8 375 aaPredicted RBP29.59■■■□□ 2.33
CDR2-202ENST00000561630 SERPINA10Q9UK55 444 aa29.59■■■□□ 2.33
CDR2-202ENST00000561630 MAP2K2P36507 400 aa29.58■■■□□ 2.33
CDR2-202ENST00000561630 FKBP1BP68106 108 aa29.58■■■□□ 2.33
CDR2-202ENST00000561630 MAP2K1Q02750 393 aaPredicted RBP29.58■■■□□ 2.33
CDR2-202ENST00000561630 PRAMEF18Q5VWM3 479 aa29.58■■■□□ 2.33
CDR2-202ENST00000561630 PNMA6EA0A0J9YXQ4 647 aa29.57■■■□□ 2.32
CDR2-202ENST00000561630 ZBTB7BO15156 539 aaPredicted RBP29.57■■■□□ 2.32
CDR2-202ENST00000561630 MYO1BO43795 1136 aa29.57■■■□□ 2.32
CDR2-202ENST00000561630 RBM5P52756 815 aaKnown RBP eCLIP29.57■■■□□ 2.32
CDR2-202ENST00000561630 AOC2O75106 756 aa29.56■■■□□ 2.32
CDR2-202ENST00000561630 GRIK5Q16478 980 aa29.56■■■□□ 2.32
CDR2-202ENST00000561630 RGMBQ6NW40 437 aa29.55■■■□□ 2.32
CDR2-202ENST00000561630 AIDAQ96BJ3 306 aa29.55■■■□□ 2.32
CDR2-202ENST00000561630 THSD7BQ9C0I4 1608 aa29.55■■■□□ 2.32
CDR2-202ENST00000561630 AOX1Q06278 1338 aa29.54■■■□□ 2.32
CDR2-202ENST00000561630 FOXN1O15353 648 aa29.54■■■□□ 2.32
CDR2-202ENST00000561630 TFCP2Q12800 502 aa29.54■■■□□ 2.32
CDR2-202ENST00000561630 DEFB129Q9H1M3 183 aa29.54■■■□□ 2.32
CDR2-202ENST00000561630 GNL3LQ9NVN8 582 aaKnown RBP29.54■■■□□ 2.32
CDR2-202ENST00000561630 SUGT1Q9Y2Z0 365 aa29.54■■■□□ 2.32
CDR2-202ENST00000561630 CLRN2A0PK11 232 aa29.53■■■□□ 2.32
CDR2-202ENST00000561630 CRKP46108 304 aa29.53■■■□□ 2.32
CDR2-202ENST00000561630 HDLBPQ00341 1268 aaKnown RBP29.53■■■□□ 2.32
CDR2-202ENST00000561630 WDR66Q8TBY9 1149 aa29.53■■■□□ 2.32
CDR2-202ENST00000561630 PANK1Q8TE04 598 aa29.53■■■□□ 2.32
CDR2-202ENST00000561630 AKAP2Q9Y2D5 859 aa29.53■■■□□ 2.32
CDR2-202ENST00000561630 NF2P35240 595 aa29.52■■■□□ 2.32
CDR2-202ENST00000561630 NOGQ13253 232 aa29.52■■■□□ 2.32
CDR2-202ENST00000561630 POLA2Q14181 598 aa29.52■■■□□ 2.32
CDR2-202ENST00000561630 CCDC102AQ96A19 550 aa29.52■■■□□ 2.32
CDR2-202ENST00000561630 COL1A1P02452 1464 aaPredicted RBP29.52■■■□□ 2.32
CDR2-202ENST00000561630 FAM155AB1AL88 458 aaPredicted RBP29.51■■■□□ 2.31
CDR2-202ENST00000561630 ZBTB22O15209 634 aa29.51■■■□□ 2.31
CDR2-202ENST00000561630 MS4A1P11836 297 aa29.51■■■□□ 2.31
CDR2-202ENST00000561630 ADORA1P30542 326 aa29.51■■■□□ 2.31
CDR2-202ENST00000561630 ZNF157P51786 506 aaPredicted RBP29.51■■■□□ 2.31
CDR2-202ENST00000561630 TIMM10P62072 90 aa29.51■■■□□ 2.31
CDR2-202ENST00000561630 ATP8B2P98198 1209 aa29.51■■■□□ 2.31
CDR2-202ENST00000561630 SSH3Q8TE77 659 aa29.51■■■□□ 2.31
CDR2-202ENST00000561630 MRIQ9BWK5 157 aa29.51■■■□□ 2.31
CDR2-202ENST00000561630 C1orf115Q9H7X2 142 aa29.51■■■□□ 2.31
CDR2-202ENST00000561630 RCAN3Q9UKA8 241 aa29.51■■■□□ 2.31
CDR2-202ENST00000561630 PPP2R3BQ9Y5P8 575 aa29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms