RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 C2orf69Q8N8R5 385 aa21.58■■□□□ 1.05
CDC42BPB-208ENST00000561271 HDAC9Q9UKV0 1011 aa21.58■■□□□ 1.05
CDC42BPB-208ENST00000561271 LAMB1P07942 1786 aa21.58■■□□□ 1.04
CDC42BPB-208ENST00000561271 F8W031 263 aaPredicted RBP21.57■■□□□ 1.04
CDC42BPB-208ENST00000561271 UBTFL1P0CB47 393 aaPredicted RBP21.57■■□□□ 1.04
CDC42BPB-208ENST00000561271 HNRNPUQ00839 825 aaKnown RBP eCLIP21.57■■□□□ 1.04
CDC42BPB-208ENST00000561271 TNS4Q8IZW8 715 aa21.57■■□□□ 1.04
CDC42BPB-208ENST00000561271 VGLL2Q8N8G2 317 aa21.56■■□□□ 1.04
CDC42BPB-208ENST00000561271 HSPA8P11142 646 aaKnown RBP21.55■■□□□ 1.04
CDC42BPB-208ENST00000561271 MAP2K2P36507 400 aa21.55■■□□□ 1.04
CDC42BPB-208ENST00000561271 RFX5P48382 616 aaPredicted RBP21.55■■□□□ 1.04
CDC42BPB-208ENST00000561271 LBX1P52954 281 aa21.55■■□□□ 1.04
CDC42BPB-208ENST00000561271 ZBED3Q96IU2 234 aaPredicted RBP21.55■■□□□ 1.04
CDC42BPB-208ENST00000561271 FAM84BQ96KN1 310 aaPredicted RBP21.55■■□□□ 1.04
CDC42BPB-208ENST00000561271 AK9Q5TCS8 1911 aa21.55■■□□□ 1.04
CDC42BPB-208ENST00000561271 HIBADHP31937 336 aaKnown RBP21.54■■□□□ 1.04
CDC42BPB-208ENST00000561271 MMP14P50281 582 aa21.54■■□□□ 1.04
CDC42BPB-208ENST00000561271 PRAMEF18Q5VWM3 479 aa21.54■■□□□ 1.04
CDC42BPB-208ENST00000561271 RGMBQ6NW40 437 aa21.54■■□□□ 1.04
CDC42BPB-208ENST00000561271 TDRD7Q8NHU6 1098 aaKnown RBP21.54■■□□□ 1.04
CDC42BPB-208ENST00000561271 ZIC5Q96T25 663 aa21.54■■□□□ 1.04
CDC42BPB-208ENST00000561271 MEIS3Q99687 375 aa21.54■■□□□ 1.04
CDC42BPB-208ENST00000561271 PCDHAC2Q9Y5I4 1007 aa21.54■■□□□ 1.04
CDC42BPB-208ENST00000561271 LRRFIP2Q9Y608 721 aaKnown RBP21.54■■□□□ 1.04
CDC42BPB-208ENST00000561271 FAM205AQ6ZU69 1335 aa21.54■■□□□ 1.04
CDC42BPB-208ENST00000561271 MYH2Q9UKX2 1941 aa21.53■■□□□ 1.04
CDC42BPB-208ENST00000561271 COL1A1P02452 1464 aaPredicted RBP21.53■■□□□ 1.04
CDC42BPB-208ENST00000561271 FKBP1AP62942 108 aaKnown RBP21.53■■□□□ 1.04
CDC42BPB-208ENST00000561271 BEGAINQ9BUH8 593 aa21.53■■□□□ 1.04
CDC42BPB-208ENST00000561271 PRDM10Q9NQV6 1147 aa21.53■■□□□ 1.04
CDC42BPB-208ENST00000561271 IQSEC3Q9UPP2 1182 aaPredicted RBP21.53■■□□□ 1.04
CDC42BPB-208ENST00000561271 FAM155AB1AL88 458 aaPredicted RBP21.52■■□□□ 1.04
CDC42BPB-208ENST00000561271 PDE8BO95263 885 aa21.52■■□□□ 1.04
CDC42BPB-208ENST00000561271 NOGQ13253 232 aa21.52■■□□□ 1.04
CDC42BPB-208ENST00000561271 DLGAP5Q15398 846 aa21.52■■□□□ 1.04
CDC42BPB-208ENST00000561271 MFSD14BQ5SR56 506 aa21.52■■□□□ 1.04
CDC42BPB-208ENST00000561271 APOBEC3FQ8IUX4 373 aaKnown RBP21.52■■□□□ 1.04
CDC42BPB-208ENST00000561271 TSKSQ9UJT2 592 aa21.52■■□□□ 1.04
CDC42BPB-208ENST00000561271 TNNQ9UQP3 1299 aa21.52■■□□□ 1.04
CDC42BPB-208ENST00000561271 EYA2O00167 538 aa21.51■■□□□ 1.03
CDC42BPB-208ENST00000561271 BCAR3O75815 825 aa21.51■■□□□ 1.03
CDC42BPB-208ENST00000561271 ZNF157P51786 506 aaPredicted RBP21.51■■□□□ 1.03
CDC42BPB-208ENST00000561271 PTPN12Q05209 780 aaKnown RBP21.51■■□□□ 1.03
CDC42BPB-208ENST00000561271 CFAP100Q494V2 611 aa21.51■■□□□ 1.03
CDC42BPB-208ENST00000561271 MOB2Q70IA6 237 aa21.51■■□□□ 1.03
CDC42BPB-208ENST00000561271 VPS37DQ86XT2 251 aa21.51■■□□□ 1.03
CDC42BPB-208ENST00000561271 ARHGAP45Q92619 1136 aa21.51■■□□□ 1.03
CDC42BPB-208ENST00000561271 SIL1Q9H173 461 aa21.51■■□□□ 1.03
CDC42BPB-208ENST00000561271 AOX1Q06278 1338 aa21.51■■□□□ 1.03
CDC42BPB-208ENST00000561271 SSC5DA1L4H1 1573 aa21.5■■□□□ 1.03
CDC42BPB-208ENST00000561271 TRIM27P14373 513 aa21.5■■□□□ 1.03
CDC42BPB-208ENST00000561271 PUM3Q15397 648 aaKnown RBP21.5■■□□□ 1.03
CDC42BPB-208ENST00000561271 FRAT1Q92837 279 aaPredicted RBP21.5■■□□□ 1.03
CDC42BPB-208ENST00000561271 SPDYE2BA6NHP3 402 aa21.49■■□□□ 1.03
CDC42BPB-208ENST00000561271 SLC10A3P09131 477 aa21.49■■□□□ 1.03
CDC42BPB-208ENST00000561271 SPDYE6P0CI01 402 aa21.49■■□□□ 1.03
CDC42BPB-208ENST00000561271 CHAF1AQ13111 956 aaPredicted RBP21.49■■□□□ 1.03
CDC42BPB-208ENST00000561271 INTS3Q68E01 1043 aaKnown RBP21.49■■□□□ 1.03
CDC42BPB-208ENST00000561271 FBXO33Q7Z6M2 555 aa21.49■■□□□ 1.03
CDC42BPB-208ENST00000561271 MTMR14Q8NCE2 650 aa21.49■■□□□ 1.03
CDC42BPB-208ENST00000561271 CLRN2A0PK11 232 aa21.48■■□□□ 1.03
CDC42BPB-208ENST00000561271 FKBP1BP68106 108 aa21.48■■□□□ 1.03
CDC42BPB-208ENST00000561271 TTLL12Q14166 644 aaPredicted RBP21.48■■□□□ 1.03
CDC42BPB-208ENST00000561271 CAVIN4Q5BKX8 364 aa21.48■■□□□ 1.03
CDC42BPB-208ENST00000561271 ATG9AQ7Z3C6 839 aa21.48■■□□□ 1.03
CDC42BPB-208ENST00000561271 RASAL3Q86YV0 1011 aa21.48■■□□□ 1.03
CDC42BPB-208ENST00000561271 TTF2Q9UNY4 1162 aaKnown RBP21.48■■□□□ 1.03
CDC42BPB-208ENST00000561271 CAPN15O75808 1086 aa21.47■■□□□ 1.03
CDC42BPB-208ENST00000561271 FGFR2P21802 821 aa21.47■■□□□ 1.03
CDC42BPB-208ENST00000561271 BCAMP50895 628 aa21.47■■□□□ 1.03
CDC42BPB-208ENST00000561271 RBM5P52756 815 aaKnown RBP eCLIP21.47■■□□□ 1.03
CDC42BPB-208ENST00000561271 ATF7IPQ6VMQ6 1270 aa21.47■■□□□ 1.03
CDC42BPB-208ENST00000561271 CCDC102AQ96A19 550 aa21.47■■□□□ 1.03
CDC42BPB-208ENST00000561271 PRMT6Q96LA8 375 aaPredicted RBP21.47■■□□□ 1.03
CDC42BPB-208ENST00000561271 PA2G4Q9UQ80 394 aaKnown RBP21.47■■□□□ 1.03
CDC42BPB-208ENST00000561271 UBE2Q2LH0YL09 131 aa21.46■■□□□ 1.03
CDC42BPB-208ENST00000561271 FRAT2O75474 233 aaPredicted RBP21.46■■□□□ 1.03
CDC42BPB-208ENST00000561271 IFIT1P09914 478 aaKnown RBP21.46■■□□□ 1.03
CDC42BPB-208ENST00000561271 NF2P35240 595 aa21.46■■□□□ 1.03
CDC42BPB-208ENST00000561271 GRIK5Q16478 980 aa21.46■■□□□ 1.03
CDC42BPB-208ENST00000561271 CLUAP1Q96AJ1 413 aa21.46■■□□□ 1.03
CDC42BPB-208ENST00000561271 VEZTQ9HBM0 779 aa21.46■■□□□ 1.03
CDC42BPB-208ENST00000561271 MYO5AQ9Y4I1 1855 aaKnown RBP21.45■■□□□ 1.02
CDC42BPB-208ENST00000561271 IPO8O15397 1037 aaKnown RBP21.45■■□□□ 1.02
CDC42BPB-208ENST00000561271 MYO1BO43795 1136 aa21.45■■□□□ 1.02
CDC42BPB-208ENST00000561271 SLC5A1P13866 664 aa21.45■■□□□ 1.02
CDC42BPB-208ENST00000561271 KIF23Q02241 960 aaPredicted RBP21.45■■□□□ 1.02
CDC42BPB-208ENST00000561271 PRKG1Q13976 671 aa21.45■■□□□ 1.02
CDC42BPB-208ENST00000561271 HDAC5Q9UQL6 1122 aa21.45■■□□□ 1.02
CDC42BPB-208ENST00000561271 DOCK2Q92608 1830 aa21.44■■□□□ 1.02
CDC42BPB-208ENST00000561271 CIAO1O76071 339 aa21.44■■□□□ 1.02
CDC42BPB-208ENST00000561271 GNAI3P08754 354 aa21.44■■□□□ 1.02
CDC42BPB-208ENST00000561271 DEFB129Q9H1M3 183 aa21.44■■□□□ 1.02
CDC42BPB-208ENST00000561271 FZD1Q9UP38 647 aa21.44■■□□□ 1.02
CDC42BPB-208ENST00000561271 ZBED9Q6R2W3 1325 aa21.44■■□□□ 1.02
CDC42BPB-208ENST00000561271 CA12O43570 354 aa21.43■■□□□ 1.02
CDC42BPB-208ENST00000561271 ATP2B3Q16720 1220 aa21.43■■□□□ 1.02
CDC42BPB-208ENST00000561271 LPIN2Q92539 896 aa21.43■■□□□ 1.02
CDC42BPB-208ENST00000561271 SERPINA10Q9UK55 444 aa21.43■■□□□ 1.02
CDC42BPB-208ENST00000561271 FBXO3Q9UK99 471 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms