RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 SSC5DA1L4H1 1573 aa15.89■□□□□ 0.13
CHRNA3-208ENST00000561128 F8W031 263 aaPredicted RBP15.89■□□□□ 0.13
CHRNA3-208ENST00000561128 FOXN1O15353 648 aa15.89■□□□□ 0.13
CHRNA3-208ENST00000561128 FGFR2P21802 821 aa15.89■□□□□ 0.13
CHRNA3-208ENST00000561128 UBE4AQ14139 1066 aa15.89■□□□□ 0.13
CHRNA3-208ENST00000561128 ZNF804AQ7Z570 1209 aa15.89■□□□□ 0.13
CHRNA3-208ENST00000561128 TDRD7Q8NHU6 1098 aaKnown RBP15.89■□□□□ 0.13
CHRNA3-208ENST00000561128 ZIC5Q96T25 663 aa15.89■□□□□ 0.13
CHRNA3-208ENST00000561128 SIL1Q9H173 461 aa15.89■□□□□ 0.13
CHRNA3-208ENST00000561128 MROH5Q6ZUA9 1318 aa15.89■□□□□ 0.13
CHRNA3-208ENST00000561128 RLBP1P12271 317 aa15.88■□□□□ 0.13
CHRNA3-208ENST00000561128 ATF7IPQ6VMQ6 1270 aa15.88■□□□□ 0.13
CHRNA3-208ENST00000561128 MOB2Q70IA6 237 aa15.88■□□□□ 0.13
CHRNA3-208ENST00000561128 ARHGAP45Q92619 1136 aa15.88■□□□□ 0.13
CHRNA3-208ENST00000561128 DCPSQ96C86 337 aaKnown RBP15.88■□□□□ 0.13
CHRNA3-208ENST00000561128 MYO3BQ8WXR4 1341 aa15.88■□□□□ 0.13
CHRNA3-208ENST00000561128 PAPPA2Q9BXP8 1791 aa15.87■□□□□ 0.13
CHRNA3-208ENST00000561128 PCNTO95613 3336 aa15.87■□□□□ 0.13
CHRNA3-208ENST00000561128 EYA2O00167 538 aa15.87■□□□□ 0.13
CHRNA3-208ENST00000561128 PDE8BO95263 885 aa15.87■□□□□ 0.13
CHRNA3-208ENST00000561128 PAXIP1Q6ZW49 1069 aaPredicted RBP15.87■□□□□ 0.13
CHRNA3-208ENST00000561128 FBXO33Q7Z6M2 555 aa15.87■□□□□ 0.13
CHRNA3-208ENST00000561128 TMEM57Q8N5G2 664 aa15.87■□□□□ 0.13
CHRNA3-208ENST00000561128 FAM205AQ6ZU69 1335 aa15.87■□□□□ 0.13
CHRNA3-208ENST00000561128 MYH13Q9UKX3 1938 aa15.86■□□□□ 0.13
CHRNA3-208ENST00000561128 HIBADHP31937 336 aaKnown RBP15.86■□□□□ 0.13
CHRNA3-208ENST00000561128 BCAMP50895 628 aa15.86■□□□□ 0.13
CHRNA3-208ENST00000561128 SULF1Q8IWU6 871 aa15.86■□□□□ 0.13
CHRNA3-208ENST00000561128 GBA2Q9HCG7 927 aaPredicted RBP15.86■□□□□ 0.13
CHRNA3-208ENST00000561128 PITPNM2Q9BZ72 1349 aa15.86■□□□□ 0.13
CHRNA3-208ENST00000561128 WBP1LQ9NX94 342 aa15.85■□□□□ 0.13
CHRNA3-208ENST00000561128 FZD1Q9UP38 647 aa15.85■□□□□ 0.13
CHRNA3-208ENST00000561128 CLRN2A0PK11 232 aa15.84■□□□□ 0.13
CHRNA3-208ENST00000561128 FAM155AB1AL88 458 aaPredicted RBP15.84■□□□□ 0.13
CHRNA3-208ENST00000561128 HUNKP57058 714 aa15.84■□□□□ 0.13
CHRNA3-208ENST00000561128 CHAF1AQ13111 956 aaPredicted RBP15.84■□□□□ 0.13
CHRNA3-208ENST00000561128 PNMA6EA0A0J9YXQ4 647 aa15.83■□□□□ 0.12
CHRNA3-208ENST00000561128 ADORA1P30542 326 aa15.83■□□□□ 0.12
CHRNA3-208ENST00000561128 PUM3Q15397 648 aaKnown RBP15.83■□□□□ 0.12
CHRNA3-208ENST00000561128 CFAP100Q494V2 611 aa15.83■□□□□ 0.12
CHRNA3-208ENST00000561128 MFSD14BQ5SR56 506 aa15.83■□□□□ 0.12
CHRNA3-208ENST00000561128 OGFOD1Q8N543 542 aa15.83■□□□□ 0.12
CHRNA3-208ENST00000561128 PRMT6Q96LA8 375 aaPredicted RBP15.83■□□□□ 0.12
CHRNA3-208ENST00000561128 C1orf115Q9H7X2 142 aa15.83■□□□□ 0.12
CHRNA3-208ENST00000561128 SPDYE2BA6NHP3 402 aa15.82■□□□□ 0.12
CHRNA3-208ENST00000561128 CIAO1O76071 339 aa15.82■□□□□ 0.12
CHRNA3-208ENST00000561128 SPDYE6P0CI01 402 aa15.82■□□□□ 0.12
CHRNA3-208ENST00000561128 FKBP1AP62942 108 aaKnown RBP15.82■□□□□ 0.12
CHRNA3-208ENST00000561128 MTX1Q13505 466 aa15.82■□□□□ 0.12
CHRNA3-208ENST00000561128 ZKSCAN2Q63HK3 967 aa15.82■□□□□ 0.12
CHRNA3-208ENST00000561128 CDAN1Q8IWY9 1227 aa15.82■□□□□ 0.12
CHRNA3-208ENST00000561128 TSKSQ9UJT2 592 aa15.82■□□□□ 0.12
CHRNA3-208ENST00000561128 OTOFQ9HC10 1997 aa15.82■□□□□ 0.12
CHRNA3-208ENST00000561128 HSPA8P11142 646 aaKnown RBP15.81■□□□□ 0.12
CHRNA3-208ENST00000561128 MTMR14Q8NCE2 650 aa15.81■□□□□ 0.12
CHRNA3-208ENST00000561128 HHIPL1Q96JK4 782 aa15.81■□□□□ 0.12
CHRNA3-208ENST00000561128 COPRSQ9NQ92 184 aa15.81■□□□□ 0.12
CHRNA3-208ENST00000561128 IPO8O15397 1037 aaKnown RBP15.8■□□□□ 0.12
CHRNA3-208ENST00000561128 SRGAP3O43295 1099 aa15.8■□□□□ 0.12
CHRNA3-208ENST00000561128 GNAI3P08754 354 aa15.8■□□□□ 0.12
CHRNA3-208ENST00000561128 PHKA1P46020 1223 aa15.8■□□□□ 0.12
CHRNA3-208ENST00000561128 DLGAP5Q15398 846 aa15.8■□□□□ 0.12
CHRNA3-208ENST00000561128 ATP2B3Q16720 1220 aa15.8■□□□□ 0.12
CHRNA3-208ENST00000561128 RASAL3Q86YV0 1011 aa15.8■□□□□ 0.12
CHRNA3-208ENST00000561128 HDAC9Q9UKV0 1011 aa15.8■□□□□ 0.12
CHRNA3-208ENST00000561128 TTF2Q9UNY4 1162 aaKnown RBP15.8■□□□□ 0.12
CHRNA3-208ENST00000561128 UBE2Q2LH0YL09 131 aa15.79■□□□□ 0.12
CHRNA3-208ENST00000561128 ECE1P42892 770 aa15.79■□□□□ 0.12
CHRNA3-208ENST00000561128 LBX1P52954 281 aa15.79■□□□□ 0.12
CHRNA3-208ENST00000561128 RGMBQ6NW40 437 aa15.79■□□□□ 0.12
CHRNA3-208ENST00000561128 C2orf69Q8N8R5 385 aa15.79■□□□□ 0.12
CHRNA3-208ENST00000561128 PANK1Q8TE04 598 aa15.79■□□□□ 0.12
CHRNA3-208ENST00000561128 LPIN2Q92539 896 aa15.79■□□□□ 0.12
CHRNA3-208ENST00000561128 SLC10A3P09131 477 aa15.78■□□□□ 0.12
CHRNA3-208ENST00000561128 IFIT1P09914 478 aaKnown RBP15.78■□□□□ 0.12
CHRNA3-208ENST00000561128 SLC5A1P13866 664 aa15.78■□□□□ 0.12
CHRNA3-208ENST00000561128 TFCP2Q12800 502 aa15.78■□□□□ 0.12
CHRNA3-208ENST00000561128 PRKG1Q13976 671 aa15.78■□□□□ 0.12
CHRNA3-208ENST00000561128 TDRD3Q9H7E2 651 aaKnown RBP15.78■□□□□ 0.12
CHRNA3-208ENST00000561128 GNAI2P04899 355 aa15.77■□□□□ 0.12
CHRNA3-208ENST00000561128 IL15P40933 162 aaPredicted RBP15.77■□□□□ 0.12
CHRNA3-208ENST00000561128 CRKP46108 304 aa15.77■□□□□ 0.12
CHRNA3-208ENST00000561128 CACNB3P54284 484 aa15.77■□□□□ 0.12
CHRNA3-208ENST00000561128 CAVIN4Q5BKX8 364 aa15.77■□□□□ 0.12
CHRNA3-208ENST00000561128 VPS37DQ86XT2 251 aa15.77■□□□□ 0.12
CHRNA3-208ENST00000561128 APOBEC3FQ8IUX4 373 aaKnown RBP15.77■□□□□ 0.12
CHRNA3-208ENST00000561128 DZIP1LQ8IYY4 767 aaKnown RBP15.77■□□□□ 0.12
CHRNA3-208ENST00000561128 DEFB129Q9H1M3 183 aa15.77■□□□□ 0.12
CHRNA3-208ENST00000561128 VEZTQ9HBM0 779 aa15.77■□□□□ 0.12
CHRNA3-208ENST00000561128 PRDX5P30044 214 aa15.76■□□□□ 0.11
CHRNA3-208ENST00000561128 RBM5P52756 815 aaKnown RBP eCLIP15.76■□□□□ 0.11
CHRNA3-208ENST00000561128 SPDYE2Q495Y8 402 aa15.76■□□□□ 0.11
CHRNA3-208ENST00000561128 IFFO2Q5TF58 517 aa15.76■□□□□ 0.11
CHRNA3-208ENST00000561128 ITPRIPQ8IWB1 547 aa15.76■□□□□ 0.11
CHRNA3-208ENST00000561128 CEP126Q9P2H0 1117 aa15.76■□□□□ 0.11
CHRNA3-208ENST00000561128 ZNF70Q9UC06 446 aaPredicted RBP15.76■□□□□ 0.11
CHRNA3-208ENST00000561128 FBXO3Q9UK99 471 aa15.76■□□□□ 0.11
CHRNA3-208ENST00000561128 MAP2K2P36507 400 aa15.75■□□□□ 0.11
CHRNA3-208ENST00000561128 CTCFP49711 727 aaPredicted RBP15.75■□□□□ 0.11
CHRNA3-208ENST00000561128 ZNF157P51786 506 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms