RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 GTF2IP78347 998 aa11.86□□□□□ -0.51
RABGGTA-221ENST00000561055 CCDC102BQ68D86 513 aa11.86□□□□□ -0.51
RABGGTA-221ENST00000561055 VPS37DQ86XT2 251 aa11.86□□□□□ -0.51
RABGGTA-221ENST00000561055 ZNF512BQ96KM6 892 aaPredicted RBP11.86□□□□□ -0.51
RABGGTA-221ENST00000561055 HACL1Q9UJ83 578 aa11.86□□□□□ -0.51
RABGGTA-221ENST00000561055 ARID4AP29374 1257 aaPredicted RBP11.85□□□□□ -0.51
RABGGTA-221ENST00000561055 ADORA1P30542 326 aa11.85□□□□□ -0.51
RABGGTA-221ENST00000561055 PHKA1P46020 1223 aa11.85□□□□□ -0.51
RABGGTA-221ENST00000561055 CLASRPQ8N2M8 674 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-221ENST00000561055 ZNF526Q8TF50 670 aaPredicted RBP11.85□□□□□ -0.51
RABGGTA-221ENST00000561055 TBC1D22AQ8WUA7 517 aa11.85□□□□□ -0.51
RABGGTA-221ENST00000561055 NEUROD6Q96NK8 337 aa11.85□□□□□ -0.51
RABGGTA-221ENST00000561055 TAF1DQ9H5J8 278 aaPredicted RBP11.85□□□□□ -0.51
RABGGTA-221ENST00000561055 GNL3LQ9NVN8 582 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-221ENST00000561055 CNOT7Q9UIV1 285 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-221ENST00000561055 ZBTB12Q9Y330 459 aaPredicted RBP11.85□□□□□ -0.51
RABGGTA-221ENST00000561055 TRPM7Q96QT4 1865 aa11.85□□□□□ -0.51
RABGGTA-221ENST00000561055 H7C1D1 291 aa11.84□□□□□ -0.51
RABGGTA-221ENST00000561055 LMOD1P29536 600 aaPredicted RBP11.84□□□□□ -0.51
RABGGTA-221ENST00000561055 EPHX2P34913 555 aa11.84□□□□□ -0.51
RABGGTA-221ENST00000561055 EPS15P42566 896 aa11.84□□□□□ -0.51
RABGGTA-221ENST00000561055 ZNF280AP59817 542 aaPredicted RBP11.84□□□□□ -0.51
RABGGTA-221ENST00000561055 IFFO2Q5TF58 517 aa11.84□□□□□ -0.51
RABGGTA-221ENST00000561055 PNMA8AQ86V59 439 aaPredicted RBP11.84□□□□□ -0.51
RABGGTA-221ENST00000561055 CERS5Q8N5B7 392 aa11.84□□□□□ -0.51
RABGGTA-221ENST00000561055 GCC1Q96CN9 775 aa11.84□□□□□ -0.51
RABGGTA-221ENST00000561055 LRRCC1Q9C099 1032 aa11.84□□□□□ -0.51
RABGGTA-221ENST00000561055 RWDD1Q9H446 243 aaPredicted RBP11.84□□□□□ -0.51
RABGGTA-221ENST00000561055 DBNLQ9UJU6 430 aaKnown RBP11.84□□□□□ -0.51
RABGGTA-221ENST00000561055 DENND2AQ9ULE3 1009 aa11.84□□□□□ -0.51
RABGGTA-221ENST00000561055 SUGT1Q9Y2Z0 365 aa11.84□□□□□ -0.51
RABGGTA-221ENST00000561055 SALL1Q9NSC2 1324 aa11.84□□□□□ -0.51
RABGGTA-221ENST00000561055 COL1A1P02452 1464 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-221ENST00000561055 UQCRFS1P1P0C7P4 283 aa11.83□□□□□ -0.52
RABGGTA-221ENST00000561055 USP50Q70EL3 339 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-221ENST00000561055 SMC5Q8IY18 1101 aa11.83□□□□□ -0.52
RABGGTA-221ENST00000561055 WDR66Q8TBY9 1149 aa11.83□□□□□ -0.52
RABGGTA-221ENST00000561055 DBNDD2Q9BQY9 259 aa11.83□□□□□ -0.52
RABGGTA-221ENST00000561055 MRIQ9BWK5 157 aa11.83□□□□□ -0.52
RABGGTA-221ENST00000561055 IL1RAPL2Q9NP60 686 aa11.83□□□□□ -0.52
RABGGTA-221ENST00000561055 ADARB2Q9NS39 739 aaKnown RBP11.83□□□□□ -0.52
RABGGTA-221ENST00000561055 PGAP2Q9UHJ9 254 aa11.83□□□□□ -0.52
RABGGTA-221ENST00000561055 IGSF3O75054 1194 aa11.82□□□□□ -0.52
RABGGTA-221ENST00000561055 FRAT2O75474 233 aaPredicted RBP11.82□□□□□ -0.52
RABGGTA-221ENST00000561055 TOMM70O94826 608 aa11.82□□□□□ -0.52
RABGGTA-221ENST00000561055 USP17L8P0C7I0 530 aa11.82□□□□□ -0.52
RABGGTA-221ENST00000561055 IRX6P78412 446 aaPredicted RBP11.82□□□□□ -0.52
RABGGTA-221ENST00000561055 RASGRF1Q13972 1273 aa11.82□□□□□ -0.52
RABGGTA-221ENST00000561055 CCDC158Q5M9N0 1113 aa11.82□□□□□ -0.52
RABGGTA-221ENST00000561055 MFSD14BQ5SR56 506 aa11.82□□□□□ -0.52
RABGGTA-221ENST00000561055 GORABQ5T7V8 394 aa11.82□□□□□ -0.52
RABGGTA-221ENST00000561055 MICALL2Q8IY33 904 aa11.82□□□□□ -0.52
RABGGTA-221ENST00000561055 MTMR14Q8NCE2 650 aa11.82□□□□□ -0.52
RABGGTA-221ENST00000561055 IQSEC3Q9UPP2 1182 aaPredicted RBP11.82□□□□□ -0.52
RABGGTA-221ENST00000561055 MAST2Q6P0Q8 1798 aa11.82□□□□□ -0.52
RABGGTA-221ENST00000561055 IGHDP01880 384 aa11.81□□□□□ -0.52
RABGGTA-221ENST00000561055 HDLBPQ00341 1268 aaKnown RBP11.81□□□□□ -0.52
RABGGTA-221ENST00000561055 AACSQ86V21 672 aa11.81□□□□□ -0.52
RABGGTA-221ENST00000561055 ZC3H15Q8WU90 426 aaKnown RBP11.81□□□□□ -0.52
RABGGTA-221ENST00000561055 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.81□□□□□ -0.52
RABGGTA-221ENST00000561055 MXD3Q9BW11 206 aa11.81□□□□□ -0.52
RABGGTA-221ENST00000561055 CCDC8Q9H0W5 538 aaPredicted RBP11.81□□□□□ -0.52
RABGGTA-221ENST00000561055 TLR7Q9NYK1 1049 aaKnown RBP11.81□□□□□ -0.52
RABGGTA-221ENST00000561055 HMG20BQ9P0W2 317 aa11.81□□□□□ -0.52
RABGGTA-221ENST00000561055 CDK5RAP2Q96SN8 1893 aa11.8□□□□□ -0.52
RABGGTA-221ENST00000561055 AK9Q5TCS8 1911 aa11.8□□□□□ -0.52
RABGGTA-221ENST00000561055 SHTN1A0MZ66 631 aa11.8□□□□□ -0.52
RABGGTA-221ENST00000561055 IFIT2P09913 472 aaKnown RBP11.8□□□□□ -0.52
RABGGTA-221ENST00000561055 MCAMP43121 646 aa11.8□□□□□ -0.52
RABGGTA-221ENST00000561055 HIRAP54198 1017 aaPredicted RBP11.8□□□□□ -0.52
RABGGTA-221ENST00000561055 SCARF1Q14162 830 aa11.8□□□□□ -0.52
RABGGTA-221ENST00000561055 LDHDQ86WU2 507 aa11.8□□□□□ -0.52
RABGGTA-221ENST00000561055 OGFOD1Q8N543 542 aa11.8□□□□□ -0.52
RABGGTA-221ENST00000561055 ZGPATQ8N5A5 531 aaKnown RBP11.8□□□□□ -0.52
RABGGTA-221ENST00000561055 SPATA5Q8NB90 893 aa11.8□□□□□ -0.52
RABGGTA-221ENST00000561055 RBM46Q8TBY0 533 aaKnown RBP11.8□□□□□ -0.52
RABGGTA-221ENST00000561055 FBXW7Q969H0 707 aa11.8□□□□□ -0.52
RABGGTA-221ENST00000561055 ZBED3Q96IU2 234 aaPredicted RBP11.8□□□□□ -0.52
RABGGTA-221ENST00000561055 MYOZ2Q9NPC6 264 aa11.8□□□□□ -0.52
RABGGTA-221ENST00000561055 HDAC9Q9UKV0 1011 aa11.8□□□□□ -0.52
RABGGTA-221ENST00000561055 FOCADQ5VW36 1801 aa11.79□□□□□ -0.52
RABGGTA-221ENST00000561055 APBB1O00213 710 aa11.79□□□□□ -0.52
RABGGTA-221ENST00000561055 SMARCA5O60264 1052 aaPredicted RBP11.79□□□□□ -0.52
RABGGTA-221ENST00000561055 CHAF1AQ13111 956 aaPredicted RBP11.79□□□□□ -0.52
RABGGTA-221ENST00000561055 TTC39AQ5SRH9 613 aa11.79□□□□□ -0.52
RABGGTA-221ENST00000561055 SAMD7Q7Z3H4 446 aa11.79□□□□□ -0.52
RABGGTA-221ENST00000561055 KIAA0825Q8IV33 1275 aa11.79□□□□□ -0.52
RABGGTA-221ENST00000561055 C16orf71Q8IYS4 520 aaPredicted RBP11.79□□□□□ -0.52
RABGGTA-221ENST00000561055 SERPINA10Q9UK55 444 aa11.79□□□□□ -0.52
RABGGTA-221ENST00000561055 MAST3O60307 1309 aa11.79□□□□□ -0.52
RABGGTA-221ENST00000561055 EGFRP00533 1210 aa11.78□□□□□ -0.52
RABGGTA-221ENST00000561055 ATP5JP18859 108 aa11.78□□□□□ -0.52
RABGGTA-221ENST00000561055 FSTL1Q12841 308 aa11.78□□□□□ -0.52
RABGGTA-221ENST00000561055 GRIK5Q16478 980 aa11.78□□□□□ -0.52
RABGGTA-221ENST00000561055 KIF4BQ2VIQ3 1234 aa11.78□□□□□ -0.52
RABGGTA-221ENST00000561055 SPTY2D1Q68D10 685 aaPredicted RBP11.78□□□□□ -0.52
RABGGTA-221ENST00000561055 HHIPL2Q6UWX4 724 aa11.78□□□□□ -0.52
RABGGTA-221ENST00000561055 TRPM4Q8TD43 1214 aa11.78□□□□□ -0.52
RABGGTA-221ENST00000561055 TTF2Q9UNY4 1162 aaKnown RBP11.78□□□□□ -0.52
RABGGTA-221ENST00000561055 JAG2Q9Y219 1238 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms