RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 RIPOR2Q9Y4F9 1068 aa14.14□□□□□ -0.15
GABPB1-210ENST00000560825 OTOFQ9HC10 1997 aa14.13□□□□□ -0.15
GABPB1-210ENST00000560825 AKAP11Q9UKA4 1901 aa14.13□□□□□ -0.15
GABPB1-210ENST00000560825 SSC5DA1L4H1 1573 aa14.13□□□□□ -0.15
GABPB1-210ENST00000560825 PTPRCP08575 1304 aa14.13□□□□□ -0.15
GABPB1-210ENST00000560825 F8W031 263 aaPredicted RBP14.13□□□□□ -0.15
GABPB1-210ENST00000560825 IL1R1P14778 569 aa14.13□□□□□ -0.15
GABPB1-210ENST00000560825 C15orf52Q6ZUT6 534 aaKnown RBP14.13□□□□□ -0.15
GABPB1-210ENST00000560825 VGLL2Q8N8G2 317 aa14.13□□□□□ -0.15
GABPB1-210ENST00000560825 CNNM1Q9NRU3 951 aa14.13□□□□□ -0.15
GABPB1-210ENST00000560825 SMC4Q9NTJ3 1288 aa14.13□□□□□ -0.15
GABPB1-210ENST00000560825 NOB1Q9ULX3 412 aaKnown RBP14.13□□□□□ -0.15
GABPB1-210ENST00000560825 RFX5P48382 616 aaPredicted RBP14.12□□□□□ -0.15
GABPB1-210ENST00000560825 CTCFP49711 727 aaPredicted RBP14.12□□□□□ -0.15
GABPB1-210ENST00000560825 SULF1Q8IWU6 871 aa14.12□□□□□ -0.15
GABPB1-210ENST00000560825 FAM84BQ96KN1 310 aaPredicted RBP14.12□□□□□ -0.15
GABPB1-210ENST00000560825 IQSEC3Q9UPP2 1182 aaPredicted RBP14.12□□□□□ -0.15
GABPB1-210ENST00000560825 ECE1P42892 770 aa14.11□□□□□ -0.15
GABPB1-210ENST00000560825 ALDH1L2Q3SY69 923 aa14.11□□□□□ -0.15
GABPB1-210ENST00000560825 SAMD1Q6SPF0 538 aaPredicted RBP14.11□□□□□ -0.15
GABPB1-210ENST00000560825 AIDAQ96BJ3 306 aa14.11□□□□□ -0.15
GABPB1-210ENST00000560825 HHIPL1Q96JK4 782 aa14.11□□□□□ -0.15
GABPB1-210ENST00000560825 MAP2K1Q02750 393 aaPredicted RBP14.1□□□□□ -0.15
GABPB1-210ENST00000560825 TAF7LQ5H9L4 462 aa14.1□□□□□ -0.15
GABPB1-210ENST00000560825 RGMBQ6NW40 437 aa14.1□□□□□ -0.15
GABPB1-210ENST00000560825 PRDM10Q9NQV6 1147 aa14.1□□□□□ -0.15
GABPB1-210ENST00000560825 TNRC18O15417 2968 aaPredicted RBP14.1□□□□□ -0.15
GABPB1-210ENST00000560825 LAMB1P07942 1786 aa14.09□□□□□ -0.15
GABPB1-210ENST00000560825 PITPNM2Q9BZ72 1349 aa14.09□□□□□ -0.15
GABPB1-210ENST00000560825 UBE2Q2LH0YL09 131 aa14.09□□□□□ -0.15
GABPB1-210ENST00000560825 ABCB7O75027 752 aa14.09□□□□□ -0.15
GABPB1-210ENST00000560825 MAP2K2P36507 400 aa14.09□□□□□ -0.15
GABPB1-210ENST00000560825 RARSP54136 660 aaKnown RBP14.09□□□□□ -0.15
GABPB1-210ENST00000560825 C2orf69Q8N8R5 385 aa14.09□□□□□ -0.15
GABPB1-210ENST00000560825 PRMT6Q96LA8 375 aaPredicted RBP14.09□□□□□ -0.15
GABPB1-210ENST00000560825 COL1A1P02452 1464 aaPredicted RBP14.09□□□□□ -0.15
GABPB1-210ENST00000560825 MYO3BQ8WXR4 1341 aa14.09□□□□□ -0.15
GABPB1-210ENST00000560825 ZNF157P51786 506 aaPredicted RBP14.08□□□□□ -0.15
GABPB1-210ENST00000560825 KIF23Q02241 960 aaPredicted RBP14.08□□□□□ -0.15
GABPB1-210ENST00000560825 PRKG1Q13976 671 aa14.08□□□□□ -0.15
GABPB1-210ENST00000560825 ZNF804AQ7Z570 1209 aa14.08□□□□□ -0.15
GABPB1-210ENST00000560825 RASAL3Q86YV0 1011 aa14.08□□□□□ -0.15
GABPB1-210ENST00000560825 CDAN1Q8IWY9 1227 aa14.08□□□□□ -0.15
GABPB1-210ENST00000560825 TDRD7Q8NHU6 1098 aaKnown RBP14.08□□□□□ -0.15
GABPB1-210ENST00000560825 CLRN2A0PK11 232 aa14.07□□□□□ -0.16
GABPB1-210ENST00000560825 BCAR3O75815 825 aa14.07□□□□□ -0.16
GABPB1-210ENST00000560825 SLC10A3P09131 477 aa14.07□□□□□ -0.16
GABPB1-210ENST00000560825 BRPF1P55201 1214 aaPredicted RBP14.07□□□□□ -0.16
GABPB1-210ENST00000560825 PTPN12Q05209 780 aaKnown RBP14.07□□□□□ -0.16
GABPB1-210ENST00000560825 ATG9AQ7Z3C6 839 aa14.07□□□□□ -0.16
GABPB1-210ENST00000560825 OGFOD1Q8N543 542 aa14.07□□□□□ -0.16
GABPB1-210ENST00000560825 MEIS3Q99687 375 aa14.07□□□□□ -0.16
GABPB1-210ENST00000560825 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.07□□□□□ -0.16
GABPB1-210ENST00000560825 HTTP42858 3142 aa14.07□□□□□ -0.16
GABPB1-210ENST00000560825 UBE4AQ14139 1066 aa14.07□□□□□ -0.16
GABPB1-210ENST00000560825 CFAP100Q494V2 611 aa14.07□□□□□ -0.16
GABPB1-210ENST00000560825 CSRNP1Q96S65 589 aa14.07□□□□□ -0.16
GABPB1-210ENST00000560825 CENPFP49454 3210 aa14.06□□□□□ -0.16
GABPB1-210ENST00000560825 FAM205AQ6ZU69 1335 aa14.06□□□□□ -0.16
GABPB1-210ENST00000560825 MROH5Q6ZUA9 1318 aa14.06□□□□□ -0.16
GABPB1-210ENST00000560825 FGFR2P21802 821 aa14.06□□□□□ -0.16
GABPB1-210ENST00000560825 BCAMP50895 628 aa14.06□□□□□ -0.16
GABPB1-210ENST00000560825 MKRN3Q13064 507 aaKnown RBP14.06□□□□□ -0.16
GABPB1-210ENST00000560825 METTL24Q5JXM2 366 aa14.06□□□□□ -0.16
GABPB1-210ENST00000560825 FBXO33Q7Z6M2 555 aa14.06□□□□□ -0.16
GABPB1-210ENST00000560825 SIL1Q9H173 461 aa14.06□□□□□ -0.16
GABPB1-210ENST00000560825 PA2G4Q9UQ80 394 aaKnown RBP14.06□□□□□ -0.16
GABPB1-210ENST00000560825 LRRFIP2Q9Y608 721 aaKnown RBP14.06□□□□□ -0.16
GABPB1-210ENST00000560825 SPDYE2BA6NHP3 402 aa14.05□□□□□ -0.16
GABPB1-210ENST00000560825 PDE8BO95263 885 aa14.05□□□□□ -0.16
GABPB1-210ENST00000560825 SPDYE6P0CI01 402 aa14.05□□□□□ -0.16
GABPB1-210ENST00000560825 HIBADHP31937 336 aaKnown RBP14.05□□□□□ -0.16
GABPB1-210ENST00000560825 NOGQ13253 232 aa14.05□□□□□ -0.16
GABPB1-210ENST00000560825 MFSD14BQ5SR56 506 aa14.05□□□□□ -0.16
GABPB1-210ENST00000560825 DLGAP5Q15398 846 aa14.04□□□□□ -0.16
GABPB1-210ENST00000560825 MTMR14Q8NCE2 650 aa14.04□□□□□ -0.16
GABPB1-210ENST00000560825 DEFB129Q9H1M3 183 aa14.04□□□□□ -0.16
GABPB1-210ENST00000560825 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.04□□□□□ -0.16
GABPB1-210ENST00000560825 CHAF1AQ13111 956 aaPredicted RBP14.03□□□□□ -0.16
GABPB1-210ENST00000560825 NBPF12Q5TAG4 269 aaPredicted RBP14.03□□□□□ -0.16
GABPB1-210ENST00000560825 CLMNQ96JQ2 1002 aa14.03□□□□□ -0.16
GABPB1-210ENST00000560825 TDRD3Q9H7E2 651 aaKnown RBP14.03□□□□□ -0.16
GABPB1-210ENST00000560825 RNF186Q9NXI6 227 aa14.03□□□□□ -0.16
GABPB1-210ENST00000560825 HDAC9Q9UKV0 1011 aa14.03□□□□□ -0.16
GABPB1-210ENST00000560825 TTF2Q9UNY4 1162 aaKnown RBP14.03□□□□□ -0.16
GABPB1-210ENST00000560825 EYA2O00167 538 aa14.02□□□□□ -0.16
GABPB1-210ENST00000560825 TRPA1O75762 1119 aa14.02□□□□□ -0.16
GABPB1-210ENST00000560825 TRIM27P14373 513 aa14.02□□□□□ -0.16
GABPB1-210ENST00000560825 CACNB3P54284 484 aa14.02□□□□□ -0.16
GABPB1-210ENST00000560825 FKBP1AP62942 108 aaKnown RBP14.02□□□□□ -0.16
GABPB1-210ENST00000560825 DIEXFQ68CQ4 756 aaKnown RBP14.02□□□□□ -0.16
GABPB1-210ENST00000560825 BEGAINQ9BUH8 593 aa14.02□□□□□ -0.16
GABPB1-210ENST00000560825 VEZTQ9HBM0 779 aa14.02□□□□□ -0.16
GABPB1-210ENST00000560825 MYO5AQ9Y4I1 1855 aaKnown RBP14.01□□□□□ -0.17
GABPB1-210ENST00000560825 UBTFL1P0CB47 393 aaPredicted RBP14.01□□□□□ -0.17
GABPB1-210ENST00000560825 RBM5P52756 815 aaKnown RBP eCLIP14.01□□□□□ -0.17
GABPB1-210ENST00000560825 TTLL12Q14166 644 aaPredicted RBP14.01□□□□□ -0.17
GABPB1-210ENST00000560825 APOBEC3FQ8IUX4 373 aaKnown RBP14.01□□□□□ -0.17
GABPB1-210ENST00000560825 CCDC102AQ96A19 550 aa14.01□□□□□ -0.17
GABPB1-210ENST00000560825 CLUAP1Q96AJ1 413 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms