RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 PEG3Q9GZU2 1588 aa14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 EEF2P13639 858 aaKnown RBP14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 PLCG2P16885 1265 aa14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 NMIQ13287 307 aaPredicted RBP14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 NBPF6Q5VWK0 638 aa14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 SYT10Q6XYQ8 523 aa14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 NBPF5PQ86XG9 351 aaPredicted RBP14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 CEP57Q86XR8 500 aa14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 PPFIBP2Q8ND30 876 aa14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 ERO1AQ96HE7 468 aa14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 NBPF4Q96M43 638 aa14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 NAP1L4Q99733 375 aaKnown RBP14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 TCHPQ9BT92 498 aa14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 TXNDC16Q9P2K2 825 aa14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 RNF113AO15541 343 aaKnown RBP14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 AK2P54819 239 aa14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 DTHD1Q6ZMT9 781 aa14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 CEP128Q6ZU80 1094 aa14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 CCDC63Q8NA47 563 aa14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 RGS22Q8NE09 1264 aa14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 ZEB2O60315 1214 aa14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 ANXA1P04083 346 aa14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 TTC31Q49AM3 519 aaPredicted RBP14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 LZTFL1Q9NQ48 299 aa14.9□□□□□ -0.02
CSPG4P11-201ENST00000560634 SPDYE3A6NKU9 549 aa14.89□□□□□ -0.03
CSPG4P11-201ENST00000560634 FAM13AO94988 1023 aa14.89□□□□□ -0.03
CSPG4P11-201ENST00000560634 C8orf34Q49A92 452 aa14.89□□□□□ -0.03
CSPG4P11-201ENST00000560634 NLRP3Q96P20 1036 aa14.89□□□□□ -0.03
CSPG4P11-201ENST00000560634 NAP1L3Q99457 506 aaPredicted RBP14.89□□□□□ -0.03
CSPG4P11-201ENST00000560634 PSMD1Q99460 953 aa14.89□□□□□ -0.03
CSPG4P11-201ENST00000560634 MAP3K1Q13233 1512 aa14.89□□□□□ -0.03
CSPG4P11-201ENST00000560634 ARID5AQ03989 594 aa14.89□□□□□ -0.03
CSPG4P11-201ENST00000560634 CCDC26Q8TAB7 109 aa14.89□□□□□ -0.03
CSPG4P11-201ENST00000560634 RRP36Q96EU6 259 aaKnown RBP14.89□□□□□ -0.03
CSPG4P11-201ENST00000560634 ZFP91Q96JP5 570 aaPredicted RBP14.89□□□□□ -0.03
CSPG4P11-201ENST00000560634 ACEP12821 1306 aa14.89□□□□□ -0.03
CSPG4P11-201ENST00000560634 TLDC2A0PJX2 215 aa14.89□□□□□ -0.03
CSPG4P11-201ENST00000560634 PTPDC1A2A3K4 754 aa14.89□□□□□ -0.03
CSPG4P11-201ENST00000560634 TRIM14Q14142 442 aa14.89□□□□□ -0.03
CSPG4P11-201ENST00000560634 CREB3L3Q68CJ9 461 aa14.89□□□□□ -0.03
CSPG4P11-201ENST00000560634 CCDC160A6NGH7 325 aa14.89□□□□□ -0.03
CSPG4P11-201ENST00000560634 AKR1B15C9JRZ8 316 aaPredicted RBP14.89□□□□□ -0.03
CSPG4P11-201ENST00000560634 ST5P78524 1137 aa14.89□□□□□ -0.03
CSPG4P11-201ENST00000560634 KARSQ15046 597 aaKnown RBP14.89□□□□□ -0.03
CSPG4P11-201ENST00000560634 CCDC14Q49A88 953 aa14.89□□□□□ -0.03
CSPG4P11-201ENST00000560634 ATP5DP30049 168 aa14.88□□□□□ -0.03
CSPG4P11-201ENST00000560634 RFC4P35249 363 aa14.88□□□□□ -0.03
CSPG4P11-201ENST00000560634 BAG1Q99933 345 aaPredicted RBP14.88□□□□□ -0.03
CSPG4P11-201ENST00000560634 ARHGEF11O15085 1522 aa14.88□□□□□ -0.03
CSPG4P11-201ENST00000560634 ARL1P40616 181 aaPredicted RBP14.88□□□□□ -0.03
CSPG4P11-201ENST00000560634 LACTBP83111 547 aaPredicted RBP14.88□□□□□ -0.03
CSPG4P11-201ENST00000560634 VWA3BQ502W6 1294 aa14.88□□□□□ -0.03
CSPG4P11-201ENST00000560634 B4GALNT4Q76KP1 1039 aa14.88□□□□□ -0.03
CSPG4P11-201ENST00000560634 CAPZA3Q96KX2 299 aa14.88□□□□□ -0.03
CSPG4P11-201ENST00000560634 ELP1O95163 1332 aa14.88□□□□□ -0.03
CSPG4P11-201ENST00000560634 IFT81Q8WYA0 676 aa14.88□□□□□ -0.03
CSPG4P11-201ENST00000560634 CSRNP2Q9H175 543 aa14.88□□□□□ -0.03
CSPG4P11-201ENST00000560634 NKIRAS1Q9NYS0 192 aa14.88□□□□□ -0.03
CSPG4P11-201ENST00000560634 FAM160A1Q05DH4 1040 aa14.88□□□□□ -0.03
CSPG4P11-201ENST00000560634 CCDC122Q5T0U0 273 aa14.88□□□□□ -0.03
CSPG4P11-201ENST00000560634 HDAC9Q9UKV0 1011 aa14.88□□□□□ -0.03
CSPG4P11-201ENST00000560634 MAGEB6P1A0A0J9YX57 407 aa14.87□□□□□ -0.03
CSPG4P11-201ENST00000560634 RHOXF2BP0C7M4 288 aa14.87□□□□□ -0.03
CSPG4P11-201ENST00000560634 STX17P56962 302 aa14.87□□□□□ -0.03
CSPG4P11-201ENST00000560634 RUFY3Q7L099 469 aa14.87□□□□□ -0.03
CSPG4P11-201ENST00000560634 CCDC50Q8IVM0 306 aa14.87□□□□□ -0.03
CSPG4P11-201ENST00000560634 IFT74Q96LB3 600 aa14.87□□□□□ -0.03
CSPG4P11-201ENST00000560634 RHOXF2Q9BQY4 288 aa14.87□□□□□ -0.03
CSPG4P11-201ENST00000560634 SOS1Q07889 1333 aaPredicted RBP14.87□□□□□ -0.03
CSPG4P11-201ENST00000560634 CDK13Q14004 1512 aaKnown RBP14.87□□□□□ -0.03
CSPG4P11-201ENST00000560634 NOL3O60936 208 aaKnown RBP14.87□□□□□ -0.03
CSPG4P11-201ENST00000560634 PPP2R3AQ06190 1150 aa14.87□□□□□ -0.03
CSPG4P11-201ENST00000560634 NCBP1Q09161 790 aaKnown RBP14.87□□□□□ -0.03
CSPG4P11-201ENST00000560634 AKAP4Q5JQC9 854 aa14.87□□□□□ -0.03
CSPG4P11-201ENST00000560634 CROCCP2Q86T23 111 aa14.87□□□□□ -0.03
CSPG4P11-201ENST00000560634 RSRC1Q96IZ7 334 aaKnown RBP14.87□□□□□ -0.03
CSPG4P11-201ENST00000560634 GPR161Q8N6U8 529 aaKnown RBP14.87□□□□□ -0.03
CSPG4P11-201ENST00000560634 PPP1R9BQ96SB3 815 aa14.87□□□□□ -0.03
CSPG4P11-201ENST00000560634 NOS1P29475 1434 aa14.87□□□□□ -0.03
CSPG4P11-201ENST00000560634 PPP1R7Q15435 360 aa14.87□□□□□ -0.03
CSPG4P11-201ENST00000560634 RILPL1Q5EBL4 403 aa14.87□□□□□ -0.03
CSPG4P11-201ENST00000560634 TRIM7Q9C029 511 aa14.87□□□□□ -0.03
CSPG4P11-201ENST00000560634 RBM28Q9NW13 759 aaKnown RBP14.86□□□□□ -0.03
CSPG4P11-201ENST00000560634 CD109Q6YHK3 1445 aa14.86□□□□□ -0.03
CSPG4P11-201ENST00000560634 GIGYF1O75420 1035 aaPredicted RBP14.86□□□□□ -0.03
CSPG4P11-201ENST00000560634 EVCP57679 992 aa14.86□□□□□ -0.03
CSPG4P11-201ENST00000560634 JARID2Q92833 1246 aaPredicted RBP14.86□□□□□ -0.03
CSPG4P11-201ENST00000560634 NGLY1Q96IV0 654 aa14.86□□□□□ -0.03
CSPG4P11-201ENST00000560634 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.86□□□□□ -0.03
CSPG4P11-201ENST00000560634 FAM169AQ9Y6X4 670 aa14.86□□□□□ -0.03
CSPG4P11-201ENST00000560634 DISP3Q9P2K9 1392 aa14.86□□□□□ -0.03
CSPG4P11-201ENST00000560634 IQGAP2Q13576 1575 aa14.86□□□□□ -0.03
CSPG4P11-201ENST00000560634 ADAMTS2O95450 1211 aa14.86□□□□□ -0.03
CSPG4P11-201ENST00000560634 PLCD1P51178 756 aa14.86□□□□□ -0.03
CSPG4P11-201ENST00000560634 C8orf58Q8NAV2 365 aa14.86□□□□□ -0.03
CSPG4P11-201ENST00000560634 KCNK9Q9NPC2 374 aa14.86□□□□□ -0.03
CSPG4P11-201ENST00000560634 TTF2Q9UNY4 1162 aaKnown RBP14.86□□□□□ -0.03
CSPG4P11-201ENST00000560634 CADPS2Q86UW7 1296 aa14.85□□□□□ -0.03
CSPG4P11-201ENST00000560634 CCDC65Q8IXS2 484 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms