RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 CD209Q9NNX6 404 aa22.85■■□□□ 1.25
TSPAN3-208ENST00000560514 CENPFP49454 3210 aa22.84■■□□□ 1.25
TSPAN3-208ENST00000560514 ITGA6P23229 1130 aa22.84■■□□□ 1.25
TSPAN3-208ENST00000560514 KLRK1P26718 216 aa22.84■■□□□ 1.25
TSPAN3-208ENST00000560514 ARMC5Q96C12 935 aa22.84■■□□□ 1.25
TSPAN3-208ENST00000560514 LAMB1P07942 1786 aa22.84■■□□□ 1.25
TSPAN3-208ENST00000560514 CLRN2A0PK11 232 aa22.83■■□□□ 1.25
TSPAN3-208ENST00000560514 F8W031 263 aaPredicted RBP22.83■■□□□ 1.25
TSPAN3-208ENST00000560514 CWF19L2Q2TBE0 894 aaKnown RBP22.83■■□□□ 1.25
TSPAN3-208ENST00000560514 MTMR14Q8NCE2 650 aa22.83■■□□□ 1.25
TSPAN3-208ENST00000560514 HTTP42858 3142 aa22.83■■□□□ 1.24
TSPAN3-208ENST00000560514 NEURL1BA8MQ27 555 aa22.82■■□□□ 1.24
TSPAN3-208ENST00000560514 CFAP100Q494V2 611 aa22.82■■□□□ 1.24
TSPAN3-208ENST00000560514 NBPF11Q86T75 865 aa22.82■■□□□ 1.24
TSPAN3-208ENST00000560514 ANKRD13AQ8IZ07 590 aa22.82■■□□□ 1.24
TSPAN3-208ENST00000560514 APAF1O14727 1248 aa22.81■■□□□ 1.24
TSPAN3-208ENST00000560514 FXR1P51114 621 aaKnown RBP eCLIP22.81■■□□□ 1.24
TSPAN3-208ENST00000560514 RBM5P52756 815 aaKnown RBP eCLIP22.81■■□□□ 1.24
TSPAN3-208ENST00000560514 CHRNDQ07001 517 aa22.81■■□□□ 1.24
TSPAN3-208ENST00000560514 SSC5DA1L4H1 1573 aa22.8■■□□□ 1.24
TSPAN3-208ENST00000560514 H7C1W4 665 aa22.8■■□□□ 1.24
TSPAN3-208ENST00000560514 SLC4A8Q2Y0W8 1093 aa22.8■■□□□ 1.24
TSPAN3-208ENST00000560514 NBPF12Q5TAG4 269 aaPredicted RBP22.8■■□□□ 1.24
TSPAN3-208ENST00000560514 SPDYE2BA6NHP3 402 aa22.79■■□□□ 1.24
TSPAN3-208ENST00000560514 SPDYE6P0CI01 402 aa22.79■■□□□ 1.24
TSPAN3-208ENST00000560514 SLC9C1Q4G0N8 1177 aa22.79■■□□□ 1.24
TSPAN3-208ENST00000560514 ZNF804AQ7Z570 1209 aa22.79■■□□□ 1.24
TSPAN3-208ENST00000560514 ANKRD18BA2A2Z9 1011 aa22.78■■□□□ 1.24
TSPAN3-208ENST00000560514 USP2O75604 605 aaPredicted RBP22.78■■□□□ 1.24
TSPAN3-208ENST00000560514 TNFAIP1Q13829 316 aa22.78■■□□□ 1.24
TSPAN3-208ENST00000560514 CERS5Q8N5B7 392 aa22.78■■□□□ 1.24
TSPAN3-208ENST00000560514 PRMT6Q96LA8 375 aaPredicted RBP22.78■■□□□ 1.24
TSPAN3-208ENST00000560514 PLA2G12BQ9BX93 195 aa22.78■■□□□ 1.24
TSPAN3-208ENST00000560514 MYH16Q9H6N6 1097 aa22.78■■□□□ 1.24
TSPAN3-208ENST00000560514 PCDHAC2Q9Y5I4 1007 aa22.78■■□□□ 1.24
TSPAN3-208ENST00000560514 GJA5P36382 358 aa22.77■■□□□ 1.24
TSPAN3-208ENST00000560514 RASA3Q14644 834 aa22.77■■□□□ 1.24
TSPAN3-208ENST00000560514 OPTNQ96CV9 577 aa22.77■■□□□ 1.24
TSPAN3-208ENST00000560514 PTPN18Q99952 460 aa22.77■■□□□ 1.24
TSPAN3-208ENST00000560514 ELP3Q9H9T3 547 aa22.77■■□□□ 1.24
TSPAN3-208ENST00000560514 ZFYVE28Q9HCC9 887 aa22.77■■□□□ 1.24
TSPAN3-208ENST00000560514 BRCA2P51587 3418 aa22.76■■□□□ 1.23
TSPAN3-208ENST00000560514 TESPA1A2RU30 521 aaPredicted RBP22.76■■□□□ 1.23
TSPAN3-208ENST00000560514 WDHD1O75717 1129 aaPredicted RBP22.76■■□□□ 1.23
TSPAN3-208ENST00000560514 FKBP1AP62942 108 aaKnown RBP22.76■■□□□ 1.23
TSPAN3-208ENST00000560514 GCKRQ14397 625 aa22.76■■□□□ 1.23
TSPAN3-208ENST00000560514 TSPYL6Q8N831 410 aa22.76■■□□□ 1.23
TSPAN3-208ENST00000560514 ZNF333Q96JL9 665 aa22.76■■□□□ 1.23
TSPAN3-208ENST00000560514 TAF5LO75529 589 aa22.75■■□□□ 1.23
TSPAN3-208ENST00000560514 DDX10Q13206 875 aaKnown RBP22.75■■□□□ 1.23
TSPAN3-208ENST00000560514 TAF1CQ15572 869 aaPredicted RBP22.75■■□□□ 1.23
TSPAN3-208ENST00000560514 COLQQ9Y215 455 aaPredicted RBP22.75■■□□□ 1.23
TSPAN3-208ENST00000560514 CSF1RP07333 972 aa22.74■■□□□ 1.23
TSPAN3-208ENST00000560514 IL1R1P14778 569 aa22.74■■□□□ 1.23
TSPAN3-208ENST00000560514 C15orf52Q6ZUT6 534 aaKnown RBP22.74■■□□□ 1.23
TSPAN3-208ENST00000560514 HELBQ8NG08 1087 aaPredicted RBP22.74■■□□□ 1.23
TSPAN3-208ENST00000560514 CHMP3Q9Y3E7 222 aa22.74■■□□□ 1.23
TSPAN3-208ENST00000560514 SLC4A2P04920 1241 aa22.73■■□□□ 1.23
TSPAN3-208ENST00000560514 GTF2A2P52657 109 aa22.73■■□□□ 1.23
TSPAN3-208ENST00000560514 JAG2Q9Y219 1238 aa22.73■■□□□ 1.23
TSPAN3-208ENST00000560514 PTCH2Q9Y6C5 1203 aa22.73■■□□□ 1.23
TSPAN3-208ENST00000560514 SNAP23O00161 211 aa22.72■■□□□ 1.23
TSPAN3-208ENST00000560514 MYCP01106 439 aaPredicted RBP22.72■■□□□ 1.23
TSPAN3-208ENST00000560514 IFIT5Q13325 482 aaKnown RBP22.72■■□□□ 1.23
TSPAN3-208ENST00000560514 KIF22Q14807 665 aa22.72■■□□□ 1.23
TSPAN3-208ENST00000560514 CSADQ9Y600 493 aa22.72■■□□□ 1.23
TSPAN3-208ENST00000560514 OTOFQ9HC10 1997 aa22.72■■□□□ 1.23
TSPAN3-208ENST00000560514 CCL15-CCL14A0A0B4J2E2 113 aa22.71■■□□□ 1.23
TSPAN3-208ENST00000560514 CCL15Q16663 113 aa22.71■■□□□ 1.23
TSPAN3-208ENST00000560514 MS4A4AQ96JQ5 239 aa22.71■■□□□ 1.23
TSPAN3-208ENST00000560514 CAP1Q01518 475 aa22.7■■□□□ 1.22
TSPAN3-208ENST00000560514 FKBP5Q13451 457 aaPredicted RBP22.7■■□□□ 1.22
TSPAN3-208ENST00000560514 TWISTNBQ3B726 338 aaPredicted RBP22.7■■□□□ 1.22
TSPAN3-208ENST00000560514 G2E3Q7L622 706 aa22.7■■□□□ 1.22
TSPAN3-208ENST00000560514 ZNF70Q9UC06 446 aaPredicted RBP22.7■■□□□ 1.22
TSPAN3-208ENST00000560514 IRS2Q9Y4H2 1338 aa22.69■■□□□ 1.22
TSPAN3-208ENST00000560514 PLIN1O60240 522 aa22.69■■□□□ 1.22
TSPAN3-208ENST00000560514 TNNI2P48788 182 aa22.69■■□□□ 1.22
TSPAN3-208ENST00000560514 CASP7P55210 303 aa22.69■■□□□ 1.22
TSPAN3-208ENST00000560514 SPDYE2Q495Y8 402 aa22.69■■□□□ 1.22
TSPAN3-208ENST00000560514 TAF7LQ5H9L4 462 aa22.69■■□□□ 1.22
TSPAN3-208ENST00000560514 DNAAF4Q8WXU2 420 aa22.69■■□□□ 1.22
TSPAN3-208ENST00000560514 BRI3BPQ8WY22 251 aa22.69■■□□□ 1.22
TSPAN3-208ENST00000560514 TSR2Q969E8 191 aaKnown RBP22.69■■□□□ 1.22
TSPAN3-208ENST00000560514 TTF2Q9UNY4 1162 aaKnown RBP22.69■■□□□ 1.22
TSPAN3-208ENST00000560514 AOX1Q06278 1338 aa22.68■■□□□ 1.22
TSPAN3-208ENST00000560514 MAP3K9P80192 1104 aa22.68■■□□□ 1.22
TSPAN3-208ENST00000560514 LINS1Q8NG48 757 aa22.68■■□□□ 1.22
TSPAN3-208ENST00000560514 OTUD5Q96G74 571 aa22.68■■□□□ 1.22
TSPAN3-208ENST00000560514 TDRD3Q9H7E2 651 aaKnown RBP22.68■■□□□ 1.22
TSPAN3-208ENST00000560514 A0A1B0GUL6 1792 aa22.68■■□□□ 1.22
TSPAN3-208ENST00000560514 H0YGN5 161 aa22.67■■□□□ 1.22
TSPAN3-208ENST00000560514 FLIIQ13045 1269 aa22.67■■□□□ 1.22
TSPAN3-208ENST00000560514 VGLL4Q14135 290 aa22.67■■□□□ 1.22
TSPAN3-208ENST00000560514 MFSD14BQ5SR56 506 aa22.67■■□□□ 1.22
TSPAN3-208ENST00000560514 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.67■■□□□ 1.22
TSPAN3-208ENST00000560514 SERPINA10Q9UK55 444 aa22.67■■□□□ 1.22
TSPAN3-208ENST00000560514 TCP10L2B9ZVM9 353 aa22.66■■□□□ 1.22
TSPAN3-208ENST00000560514 SH3TC2Q8TF17 1288 aa22.66■■□□□ 1.22
TSPAN3-208ENST00000560514 CNKSR2Q8WXI2 1034 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms