RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 LARP1BQ659C4 914 aaKnown RBP11.49□□□□□ -0.57
RTF1-206ENST00000560447 ATL3Q6DD88 541 aa11.49□□□□□ -0.57
RTF1-206ENST00000560447 DZIP3Q86Y13 1208 aaKnown RBP11.49□□□□□ -0.57
RTF1-206ENST00000560447 FAM89AQ96GI7 184 aa11.49□□□□□ -0.57
RTF1-206ENST00000560447 ZNF594Q96JF6 807 aaPredicted RBP11.49□□□□□ -0.57
RTF1-206ENST00000560447 SLC4A9Q96Q91 983 aa11.49□□□□□ -0.57
RTF1-206ENST00000560447 SCAND2PQ9GZW5 306 aaPredicted RBP11.49□□□□□ -0.57
RTF1-206ENST00000560447 ZBTB1Q9Y2K1 713 aa11.49□□□□□ -0.57
RTF1-206ENST00000560447 ITGA6P23229 1130 aa11.48□□□□□ -0.57
RTF1-206ENST00000560447 CLCN1P35523 988 aa11.48□□□□□ -0.57
RTF1-206ENST00000560447 EXOSC10Q01780 885 aaKnown RBP11.48□□□□□ -0.57
RTF1-206ENST00000560447 METTL24Q5JXM2 366 aa11.48□□□□□ -0.57
RTF1-206ENST00000560447 LDHAL6AQ6ZMR3 332 aa11.48□□□□□ -0.57
RTF1-206ENST00000560447 VGLL2Q8N8G2 317 aa11.48□□□□□ -0.57
RTF1-206ENST00000560447 SMARCC2Q8TAQ2 1214 aa11.48□□□□□ -0.57
RTF1-206ENST00000560447 ZNF274Q96GC6 653 aaPredicted RBP11.48□□□□□ -0.57
RTF1-206ENST00000560447 PDLIM2Q96JY6 352 aa11.48□□□□□ -0.57
RTF1-206ENST00000560447 PUS3Q9BZE2 481 aaKnown RBP11.48□□□□□ -0.57
RTF1-206ENST00000560447 TSPY26PQ9H489 355 aa11.48□□□□□ -0.57
RTF1-206ENST00000560447 ZSCAN16Q9H4T2 348 aaPredicted RBP11.48□□□□□ -0.57
RTF1-206ENST00000560447 CCDC87Q9NVE4 849 aa11.48□□□□□ -0.57
RTF1-206ENST00000560447 TRMT112Q9UI30 125 aaKnown RBP11.48□□□□□ -0.57
RTF1-206ENST00000560447 ZMYM6O95789 1325 aa11.48□□□□□ -0.57
RTF1-206ENST00000560447 SPATA31A5Q5VU36 1347 aa11.48□□□□□ -0.57
RTF1-206ENST00000560447 SPATA31A7Q8IWB4 1347 aa11.48□□□□□ -0.57
RTF1-206ENST00000560447 KAT6BQ8WYB5 2073 aa11.47□□□□□ -0.57
RTF1-206ENST00000560447 PDE8BO95263 885 aa11.47□□□□□ -0.57
RTF1-206ENST00000560447 ARID4AP29374 1257 aaPredicted RBP11.47□□□□□ -0.57
RTF1-206ENST00000560447 UBE3CQ15386 1083 aa11.47□□□□□ -0.57
RTF1-206ENST00000560447 HLFQ16534 295 aa11.47□□□□□ -0.57
RTF1-206ENST00000560447 NAA16Q6N069 864 aaPredicted RBP11.47□□□□□ -0.57
RTF1-206ENST00000560447 Q6ZUG5 572 aa11.47□□□□□ -0.57
RTF1-206ENST00000560447 C3orf67Q6ZVT6 689 aa11.47□□□□□ -0.57
RTF1-206ENST00000560447 TMEM121BQ9BXQ6 578 aaPredicted RBP11.47□□□□□ -0.57
RTF1-206ENST00000560447 BOLA1Q9Y3E2 137 aa11.47□□□□□ -0.57
RTF1-206ENST00000560447 A0A1B0GUL6 1792 aa11.46□□□□□ -0.57
RTF1-206ENST00000560447 SCN7AQ01118 1682 aa11.46□□□□□ -0.57
RTF1-206ENST00000560447 CARMIL3Q8ND23 1372 aa11.46□□□□□ -0.57
RTF1-206ENST00000560447 PRIM1P49642 420 aaKnown RBP11.46□□□□□ -0.57
RTF1-206ENST00000560447 IMMTQ16891 758 aaKnown RBP11.46□□□□□ -0.57
RTF1-206ENST00000560447 FOXD4L5Q5VV16 416 aaPredicted RBP11.46□□□□□ -0.57
RTF1-206ENST00000560447 CCDC129Q6ZRS4 1044 aa11.46□□□□□ -0.57
RTF1-206ENST00000560447 FOXD4L4Q8WXT5 416 aaPredicted RBP11.46□□□□□ -0.57
RTF1-206ENST00000560447 LPIN2Q92539 896 aa11.46□□□□□ -0.57
RTF1-206ENST00000560447 SEC62Q99442 399 aaKnown RBP11.46□□□□□ -0.57
RTF1-206ENST00000560447 CNNM1Q9NRU3 951 aa11.46□□□□□ -0.57
RTF1-206ENST00000560447 PCDH10Q9P2E7 1040 aa11.46□□□□□ -0.57
RTF1-206ENST00000560447 CNPY2Q9Y2B0 182 aa11.46□□□□□ -0.57
RTF1-206ENST00000560447 ZNF330Q9Y3S2 320 aaPredicted RBP11.46□□□□□ -0.57
RTF1-206ENST00000560447 MYH14Q7Z406 1995 aaKnown RBP11.45□□□□□ -0.58
RTF1-206ENST00000560447 CHD4Q14839 1912 aa11.45□□□□□ -0.58
RTF1-206ENST00000560447 SYCE3A1L190 88 aa11.45□□□□□ -0.58
RTF1-206ENST00000560447 VPS37CA5D8V6 355 aaPredicted RBP11.45□□□□□ -0.58
RTF1-206ENST00000560447 E7EWF7 191 aa11.45□□□□□ -0.58
RTF1-206ENST00000560447 FGFR2P21802 821 aa11.45□□□□□ -0.58
RTF1-206ENST00000560447 PUM3Q15397 648 aaKnown RBP11.45□□□□□ -0.58
RTF1-206ENST00000560447 INTS5Q6P9B9 1019 aaKnown RBP11.45□□□□□ -0.58
RTF1-206ENST00000560447 CLEC4GQ6UXB4 293 aa11.45□□□□□ -0.58
RTF1-206ENST00000560447 NECAB1Q8N987 351 aa11.45□□□□□ -0.58
RTF1-206ENST00000560447 RBSNQ9H1K0 784 aa11.45□□□□□ -0.58
RTF1-206ENST00000560447 GREM2Q9H772 168 aa11.45□□□□□ -0.58
RTF1-206ENST00000560447 RBM27Q9P2N5 1060 aaKnown RBP11.45□□□□□ -0.58
RTF1-206ENST00000560447 NSFL1CQ9UNZ2 370 aaKnown RBP11.45□□□□□ -0.58
RTF1-206ENST00000560447 ZNF652Q9Y2D9 606 aa11.45□□□□□ -0.58
RTF1-206ENST00000560447 CASZ1Q86V15 1759 aa11.45□□□□□ -0.58
RTF1-206ENST00000560447 TIAM2Q8IVF5 1701 aa11.45□□□□□ -0.58
RTF1-206ENST00000560447 UBN2Q6ZU65 1347 aa11.44□□□□□ -0.58
RTF1-206ENST00000560447 LOC102724428A0A0B4J2F2 783 aa11.44□□□□□ -0.58
RTF1-206ENST00000560447 ESPNB1AK53 854 aa11.44□□□□□ -0.58
RTF1-206ENST00000560447 DHX16O60231 1041 aaKnown RBP11.44□□□□□ -0.58
RTF1-206ENST00000560447 GADD45BO75293 160 aaPredicted RBP11.44□□□□□ -0.58
RTF1-206ENST00000560447 SLC5A1P13866 664 aa11.44□□□□□ -0.58
RTF1-206ENST00000560447 GPTP24298 496 aa11.44□□□□□ -0.58
RTF1-206ENST00000560447 MCM5P33992 734 aa11.44□□□□□ -0.58
RTF1-206ENST00000560447 ADD2P35612 726 aa11.44□□□□□ -0.58
RTF1-206ENST00000560447 SIK1P57059 783 aa11.44□□□□□ -0.58
RTF1-206ENST00000560447 FGD1P98174 961 aa11.44□□□□□ -0.58
RTF1-206ENST00000560447 FKBP4Q02790 459 aaKnown RBP eCLIP11.44□□□□□ -0.58
RTF1-206ENST00000560447 ALX1Q15699 326 aa11.44□□□□□ -0.58
RTF1-206ENST00000560447 STOX1Q6ZVD7 989 aa11.44□□□□□ -0.58
RTF1-206ENST00000560447 OSBP2Q969R2 916 aa11.44□□□□□ -0.58
RTF1-206ENST00000560447 UTP14AQ9BVJ6 771 aaKnown RBP11.44□□□□□ -0.58
RTF1-206ENST00000560447 CFAP45Q9UL16 551 aa11.44□□□□□ -0.58
RTF1-206ENST00000560447 TBC1D2BQ9UPU7 963 aa11.44□□□□□ -0.58
RTF1-206ENST00000560447 TAF6LQ9Y6J9 622 aa11.44□□□□□ -0.58
RTF1-206ENST00000560447 NDUFB9Q9Y6M9 179 aa11.44□□□□□ -0.58
RTF1-206ENST00000560447 COL24A1Q17RW2 1714 aa11.43□□□□□ -0.58
RTF1-206ENST00000560447 M0R2C6 588 aa11.43□□□□□ -0.58
RTF1-206ENST00000560447 TOM1O60784 492 aa11.43□□□□□ -0.58
RTF1-206ENST00000560447 ECM2O94769 699 aaPredicted RBP11.43□□□□□ -0.58
RTF1-206ENST00000560447 CAMTA2O94983 1202 aa11.43□□□□□ -0.58
RTF1-206ENST00000560447 ADORA1P30542 326 aa11.43□□□□□ -0.58
RTF1-206ENST00000560447 ZAP70P43403 619 aa11.43□□□□□ -0.58
RTF1-206ENST00000560447 CRKLP46109 303 aaKnown RBP11.43□□□□□ -0.58
RTF1-206ENST00000560447 DNM1Q05193 864 aaKnown RBP11.43□□□□□ -0.58
RTF1-206ENST00000560447 CCDC152Q4G0S7 254 aa11.43□□□□□ -0.58
RTF1-206ENST00000560447 TMED8Q6PL24 325 aaPredicted RBP11.43□□□□□ -0.58
RTF1-206ENST00000560447 BRF1Q92994 677 aa11.43□□□□□ -0.58
RTF1-206ENST00000560447 SYTL4Q96C24 671 aaPredicted RBP11.43□□□□□ -0.58
RTF1-206ENST00000560447 MS4A4AQ96JQ5 239 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms