RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 ELP3Q9H9T3 547 aa8.94□□□□□ -0.98
CRNDE-208ENST00000560029 ARID1BQ8NFD5 2236 aaPredicted RBP8.94□□□□□ -0.98
CRNDE-208ENST00000560029 H3BRJ5 948 aa8.93□□□□□ -0.98
CRNDE-208ENST00000560029 FZD5Q13467 585 aa8.93□□□□□ -0.98
CRNDE-208ENST00000560029 ANKRD34AQ69YU3 496 aa8.93□□□□□ -0.98
CRNDE-208ENST00000560029 FDX2Q6P4F2 183 aa8.93□□□□□ -0.98
CRNDE-208ENST00000560029 STIM2Q9P246 746 aa8.93□□□□□ -0.98
CRNDE-208ENST00000560029 SEPT3Q9UH03 358 aa8.93□□□□□ -0.98
CRNDE-208ENST00000560029 IVNS1ABPQ9Y6Y0 642 aa8.93□□□□□ -0.98
CRNDE-208ENST00000560029 ZBTB7CA1YPR0 619 aa8.92□□□□□ -0.98
CRNDE-208ENST00000560029 SGO2Q562F6 1265 aa8.92□□□□□ -0.98
CRNDE-208ENST00000560029 TXNDC2Q86VQ3 553 aa8.92□□□□□ -0.98
CRNDE-208ENST00000560029 ATCAYQ86WG3 371 aa8.92□□□□□ -0.98
CRNDE-208ENST00000560029 SHISA5Q8N114 240 aa8.92□□□□□ -0.98
CRNDE-208ENST00000560029 NUDT16Q96DE0 195 aaKnown RBP8.92□□□□□ -0.98
CRNDE-208ENST00000560029 RNF208Q9H0X6 261 aa8.92□□□□□ -0.98
CRNDE-208ENST00000560029 GAS2O43903 313 aaKnown RBP8.91□□□□□ -0.98
CRNDE-208ENST00000560029 MAP4P27816 1152 aaKnown RBP8.91□□□□□ -0.98
CRNDE-208ENST00000560029 SERPINB4P48594 390 aa8.91□□□□□ -0.98
CRNDE-208ENST00000560029 CABP4P57796 275 aa8.91□□□□□ -0.98
CRNDE-208ENST00000560029 PIP4K2BP78356 416 aa8.91□□□□□ -0.98
CRNDE-208ENST00000560029 PIM2Q9P1W9 311 aa8.91□□□□□ -0.98
CRNDE-208ENST00000560029 RXRBP28702 533 aa8.9□□□□□ -0.98
CRNDE-208ENST00000560029 ZNF438Q7Z4V0 828 aa8.9□□□□□ -0.98
CRNDE-208ENST00000560029 C1orf127Q8N9H9 656 aa8.9□□□□□ -0.98
CRNDE-208ENST00000560029 CCER1Q8TC90 406 aaPredicted RBP8.9□□□□□ -0.98
CRNDE-208ENST00000560029 PATL2C9JE40 543 aaKnown RBP8.89□□□□□ -0.99
CRNDE-208ENST00000560029 NFKBIEO00221 500 aa8.89□□□□□ -0.99
CRNDE-208ENST00000560029 ABL1P00519 1130 aa8.89□□□□□ -0.99
CRNDE-208ENST00000560029 F13BP05160 661 aa8.89□□□□□ -0.99
CRNDE-208ENST00000560029 ATG3Q9NT62 314 aa8.89□□□□□ -0.99
CRNDE-208ENST00000560029 SALL4Q9UJQ4 1053 aa8.89□□□□□ -0.99
CRNDE-208ENST00000560029 MTMR7Q9Y216 660 aa8.89□□□□□ -0.99
CRNDE-208ENST00000560029 GNEQ9Y223 722 aaKnown RBP8.89□□□□□ -0.99
CRNDE-208ENST00000560029 A6NHS1 94 aa8.88□□□□□ -0.99
CRNDE-208ENST00000560029 LCE1DQ5T752 114 aa8.88□□□□□ -0.99
CRNDE-208ENST00000560029 C12orf50Q8NA57 414 aaPredicted RBP8.88□□□□□ -0.99
CRNDE-208ENST00000560029 GTF3C2Q8WUA4 911 aaPredicted RBP8.88□□□□□ -0.99
CRNDE-208ENST00000560029 OSGEPQ9NPF4 335 aa8.88□□□□□ -0.99
CRNDE-208ENST00000560029 ANO2Q9NQ90 1003 aa8.88□□□□□ -0.99
CRNDE-208ENST00000560029 DZANK1Q9NVP4 752 aa8.88□□□□□ -0.99
CRNDE-208ENST00000560029 LEMD3Q9Y2U8 911 aa8.88□□□□□ -0.99
CRNDE-208ENST00000560029 PDE2AO00408 941 aaPredicted RBP8.87□□□□□ -0.99
CRNDE-208ENST00000560029 CES1P23141 567 aa8.87□□□□□ -0.99
CRNDE-208ENST00000560029 ZNF211Q13398 564 aaPredicted RBP8.87□□□□□ -0.99
CRNDE-208ENST00000560029 PDE12Q6L8Q7 609 aaKnown RBP8.87□□□□□ -0.99
CRNDE-208ENST00000560029 WNT8BQ93098 351 aa8.87□□□□□ -0.99
CRNDE-208ENST00000560029 GZF1Q9H116 711 aaPredicted RBP8.87□□□□□ -0.99
CRNDE-208ENST00000560029 ANGEL1Q9UNK9 670 aaKnown RBP8.87□□□□□ -0.99
CRNDE-208ENST00000560029 DRD2P14416 443 aa8.86□□□□□ -0.99
CRNDE-208ENST00000560029 C19orf57Q0VDD7 668 aa8.86□□□□□ -0.99
CRNDE-208ENST00000560029 MTMR3Q13615 1198 aa8.86□□□□□ -0.99
CRNDE-208ENST00000560029 NUTM2GQ5VZR2 741 aa8.86□□□□□ -0.99
CRNDE-208ENST00000560029 KRTAP4-7Q9BYR0 210 aa8.86□□□□□ -0.99
CRNDE-208ENST00000560029 HIF3AQ9Y2N7 669 aa8.86□□□□□ -0.99
CRNDE-208ENST00000560029 SOX1O00570 391 aaPredicted RBP8.85□□□□□ -0.99
CRNDE-208ENST00000560029 DLGAP3O95886 979 aa8.85□□□□□ -0.99
CRNDE-208ENST00000560029 NFKBIBQ15653 356 aa8.85□□□□□ -0.99
CRNDE-208ENST00000560029 ABTB2Q8N961 1025 aa8.85□□□□□ -0.99
CRNDE-208ENST00000560029 USP26Q9BXU7 913 aa8.85□□□□□ -0.99
CRNDE-208ENST00000560029 OSBPL1AQ9BXW6 950 aa8.85□□□□□ -0.99
CRNDE-208ENST00000560029 GGNBP2Q9H3C7 697 aa8.85□□□□□ -0.99
CRNDE-208ENST00000560029 CCDC39Q9UFE4 941 aa8.85□□□□□ -0.99
CRNDE-208ENST00000560029 SOX13Q9UN79 622 aa8.85□□□□□ -0.99
CRNDE-208ENST00000560029 MEGF11A6BM72 1044 aa8.84□□□□□ -0.99
CRNDE-208ENST00000560029 ARL4DP49703 201 aa8.84□□□□□ -0.99
CRNDE-208ENST00000560029 DNM1Q05193 864 aaKnown RBP8.84□□□□□ -0.99
CRNDE-208ENST00000560029 MSMPQ1L6U9 139 aa8.84□□□□□ -0.99
CRNDE-208ENST00000560029 OGFOD2Q6N063 350 aa8.84□□□□□ -0.99
CRNDE-208ENST00000560029 EDEM1Q92611 657 aa8.84□□□□□ -0.99
CRNDE-208ENST00000560029 FOSL1P15407 271 aa8.83□□□□□ -1
CRNDE-208ENST00000560029 NFXL1Q6ZNB6 911 aa8.83□□□□□ -1
CRNDE-208ENST00000560029 GIMAP7Q8NHV1 300 aa8.83□□□□□ -1
CRNDE-208ENST00000560029 HELQQ8TDG4 1101 aa8.83□□□□□ -1
CRNDE-208ENST00000560029 FBLIM1Q8WUP2 373 aa8.83□□□□□ -1
CRNDE-208ENST00000560029 FAM95CA0A1B0GW59 222 aa8.82□□□□□ -1
CRNDE-208ENST00000560029 SOWAHDA6NJG2 315 aa8.82□□□□□ -1
CRNDE-208ENST00000560029 H3BRB1 525 aa8.82□□□□□ -1
CRNDE-208ENST00000560029 ADMP35318 185 aa8.82□□□□□ -1
CRNDE-208ENST00000560029 C8orf34Q49A92 452 aa8.82□□□□□ -1
CRNDE-208ENST00000560029 CDPF1Q6NVV7 123 aa8.82□□□□□ -1
CRNDE-208ENST00000560029 TP53INP2Q8IXH6 220 aa8.82□□□□□ -1
CRNDE-208ENST00000560029 TMPRSS13Q9BYE2 586 aa8.82□□□□□ -1
CRNDE-208ENST00000560029 TUT1Q9H6E5 874 aaKnown RBP8.82□□□□□ -1
CRNDE-208ENST00000560029 LOC100289279A0A1B0GTE1 492 aa8.81□□□□□ -1
CRNDE-208ENST00000560029 USP11P51784 963 aa8.81□□□□□ -1
CRNDE-208ENST00000560029 IKBKEQ14164 716 aa8.81□□□□□ -1
CRNDE-208ENST00000560029 COL19A1Q14993 1142 aa8.81□□□□□ -1
CRNDE-208ENST00000560029 VN1R5Q7Z5H4 357 aa8.81□□□□□ -1
CRNDE-208ENST00000560029 OSMRQ99650 979 aa8.81□□□□□ -1
CRNDE-208ENST00000560029 CHRDQ9H2X0 955 aa8.81□□□□□ -1
CRNDE-208ENST00000560029 EGFL7Q9UHF1 273 aa8.81□□□□□ -1
CRNDE-208ENST00000560029 ICMTO60725 284 aa8.8□□□□□ -1
CRNDE-208ENST00000560029 TIAF1O95411 115 aa8.8□□□□□ -1
CRNDE-208ENST00000560029 FKBP4Q02790 459 aaKnown RBP eCLIP8.8□□□□□ -1
CRNDE-208ENST00000560029 NXPE3Q969Y0 559 aa8.8□□□□□ -1
CRNDE-208ENST00000560029 SF3B2Q13435 895 aaKnown RBP8.79□□□□□ -1
CRNDE-208ENST00000560029 PAOXQ6QHF9 649 aa8.79□□□□□ -1
CRNDE-208ENST00000560029 GLYCTKQ8IVS8 523 aa8.79□□□□□ -1
CRNDE-208ENST00000560029 TMEM102Q8N9M5 508 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms