RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 SCAF8Q9UPN6 1271 aaKnown RBP25.68■■□□□ 1.7
CHRNA3-207ENST00000559941 PAPPA2Q9BXP8 1791 aa25.68■■□□□ 1.7
CHRNA3-207ENST00000559941 FAM205AQ6ZU69 1335 aa25.67■■□□□ 1.7
CHRNA3-207ENST00000559941 HIBADHP31937 336 aaKnown RBP25.67■■□□□ 1.7
CHRNA3-207ENST00000559941 FKBP1BP68106 108 aa25.67■■□□□ 1.7
CHRNA3-207ENST00000559941 TDRD7Q8NHU6 1098 aaKnown RBP25.67■■□□□ 1.7
CHRNA3-207ENST00000559941 CCDC102AQ96A19 550 aa25.67■■□□□ 1.7
CHRNA3-207ENST00000559941 FAM155AB1AL88 458 aaPredicted RBP25.66■■□□□ 1.7
CHRNA3-207ENST00000559941 GYG1P46976 350 aa25.66■■□□□ 1.7
CHRNA3-207ENST00000559941 ZNF157P51786 506 aaPredicted RBP25.66■■□□□ 1.7
CHRNA3-207ENST00000559941 MTMR14Q8NCE2 650 aa25.66■■□□□ 1.7
CHRNA3-207ENST00000559941 ZIC5Q96T25 663 aa25.66■■□□□ 1.7
CHRNA3-207ENST00000559941 DLGAP5Q15398 846 aa25.65■■□□□ 1.7
CHRNA3-207ENST00000559941 METTL24Q5JXM2 366 aa25.65■■□□□ 1.7
CHRNA3-207ENST00000559941 APOBEC3FQ8IUX4 373 aaKnown RBP25.65■■□□□ 1.7
CHRNA3-207ENST00000559941 VGLL2Q8N8G2 317 aa25.65■■□□□ 1.7
CHRNA3-207ENST00000559941 KLHDC4Q8TBB5 520 aa25.65■■□□□ 1.7
CHRNA3-207ENST00000559941 JAG2Q9Y219 1238 aa25.65■■□□□ 1.7
CHRNA3-207ENST00000559941 CA12O43570 354 aa25.64■■□□□ 1.7
CHRNA3-207ENST00000559941 PDE8BO95263 885 aa25.64■■□□□ 1.7
CHRNA3-207ENST00000559941 RFX5P48382 616 aaPredicted RBP25.64■■□□□ 1.7
CHRNA3-207ENST00000559941 PRAMEF18Q5VWM3 479 aa25.64■■□□□ 1.7
CHRNA3-207ENST00000559941 UBTFL1P0CB47 393 aaPredicted RBP25.63■■□□□ 1.69
CHRNA3-207ENST00000559941 DIEXFQ68CQ4 756 aaKnown RBP25.63■■□□□ 1.69
CHRNA3-207ENST00000559941 FBXO33Q7Z6M2 555 aa25.63■■□□□ 1.69
CHRNA3-207ENST00000559941 MIER1Q8N108 512 aa25.63■■□□□ 1.69
CHRNA3-207ENST00000559941 ARHGAP45Q92619 1136 aa25.63■■□□□ 1.69
CHRNA3-207ENST00000559941 ARAP2Q8WZ64 1704 aa25.63■■□□□ 1.69
CHRNA3-207ENST00000559941 F8W031 263 aaPredicted RBP25.62■■□□□ 1.69
CHRNA3-207ENST00000559941 SLC10A3P09131 477 aa25.62■■□□□ 1.69
CHRNA3-207ENST00000559941 CFAP100Q494V2 611 aa25.62■■□□□ 1.69
CHRNA3-207ENST00000559941 KIF16BQ96L93 1317 aa25.62■■□□□ 1.69
CHRNA3-207ENST00000559941 PTPN12Q05209 780 aaKnown RBP25.61■■□□□ 1.69
CHRNA3-207ENST00000559941 AKAP11Q9UKA4 1901 aa25.61■■□□□ 1.69
CHRNA3-207ENST00000559941 EYA2O00167 538 aa25.6■■□□□ 1.69
CHRNA3-207ENST00000559941 NF2P35240 595 aa25.6■■□□□ 1.69
CHRNA3-207ENST00000559941 KIF23Q02241 960 aaPredicted RBP25.6■■□□□ 1.69
CHRNA3-207ENST00000559941 MFSD14BQ5SR56 506 aa25.6■■□□□ 1.69
CHRNA3-207ENST00000559941 MOB2Q70IA6 237 aa25.6■■□□□ 1.69
CHRNA3-207ENST00000559941 HDAC5Q9UQL6 1122 aa25.6■■□□□ 1.69
CHRNA3-207ENST00000559941 PCDHAC2Q9Y5I4 1007 aa25.6■■□□□ 1.69
CHRNA3-207ENST00000559941 COL1A1P02452 1464 aaPredicted RBP25.6■■□□□ 1.69
CHRNA3-207ENST00000559941 SPDYE2BA6NHP3 402 aa25.59■■□□□ 1.69
CHRNA3-207ENST00000559941 SPDYE6P0CI01 402 aa25.59■■□□□ 1.69
CHRNA3-207ENST00000559941 CAVIN4Q5BKX8 364 aa25.59■■□□□ 1.69
CHRNA3-207ENST00000559941 VPS37DQ86XT2 251 aa25.59■■□□□ 1.69
CHRNA3-207ENST00000559941 TSKSQ9UJT2 592 aa25.59■■□□□ 1.69
CHRNA3-207ENST00000559941 UBE2Q2LH0YL09 131 aa25.58■■□□□ 1.69
CHRNA3-207ENST00000559941 FGFR2P21802 821 aa25.58■■□□□ 1.69
CHRNA3-207ENST00000559941 RASAL3Q86YV0 1011 aa25.58■■□□□ 1.69
CHRNA3-207ENST00000559941 PRMT6Q96LA8 375 aaPredicted RBP25.58■■□□□ 1.69
CHRNA3-207ENST00000559941 CASP8AP2Q9UKL3 1982 aa25.58■■□□□ 1.69
CHRNA3-207ENST00000559941 MYO1BO43795 1136 aa25.57■■□□□ 1.68
CHRNA3-207ENST00000559941 CAPN15O75808 1086 aa25.57■■□□□ 1.68
CHRNA3-207ENST00000559941 PUM3Q15397 648 aaKnown RBP25.57■■□□□ 1.68
CHRNA3-207ENST00000559941 INTS3Q68E01 1043 aaKnown RBP25.57■■□□□ 1.68
CHRNA3-207ENST00000559941 DEFB129Q9H1M3 183 aa25.57■■□□□ 1.68
CHRNA3-207ENST00000559941 FBXO3Q9UK99 471 aa25.57■■□□□ 1.68
CHRNA3-207ENST00000559941 TTLL12Q14166 644 aaPredicted RBP25.56■■□□□ 1.68
CHRNA3-207ENST00000559941 ATG9AQ7Z3C6 839 aa25.56■■□□□ 1.68
CHRNA3-207ENST00000559941 SERPINA10Q9UK55 444 aa25.56■■□□□ 1.68
CHRNA3-207ENST00000559941 TTF2Q9UNY4 1162 aaKnown RBP25.56■■□□□ 1.68
CHRNA3-207ENST00000559941 LRRFIP2Q9Y608 721 aaKnown RBP25.56■■□□□ 1.68
CHRNA3-207ENST00000559941 MYH13Q9UKX3 1938 aa25.55■■□□□ 1.68
CHRNA3-207ENST00000559941 IFIT1P09914 478 aaKnown RBP25.55■■□□□ 1.68
CHRNA3-207ENST00000559941 RBM5P52756 815 aaKnown RBP eCLIP25.55■■□□□ 1.68
CHRNA3-207ENST00000559941 CSRNP1Q96S65 589 aa25.55■■□□□ 1.68
CHRNA3-207ENST00000559941 MEIS3Q99687 375 aa25.55■■□□□ 1.68
CHRNA3-207ENST00000559941 IQSEC3Q9UPP2 1182 aaPredicted RBP25.55■■□□□ 1.68
CHRNA3-207ENST00000559941 PPP2R3BQ9Y5P8 575 aa25.55■■□□□ 1.68
CHRNA3-207ENST00000559941 CLRN2A0PK11 232 aa25.54■■□□□ 1.68
CHRNA3-207ENST00000559941 IPO8O15397 1037 aaKnown RBP25.54■■□□□ 1.68
CHRNA3-207ENST00000559941 FRAT2O75474 233 aaPredicted RBP25.54■■□□□ 1.68
CHRNA3-207ENST00000559941 BCAMP50895 628 aa25.54■■□□□ 1.68
CHRNA3-207ENST00000559941 HNRNPUQ00839 825 aaKnown RBP eCLIP25.54■■□□□ 1.68
CHRNA3-207ENST00000559941 REM2Q8IYK8 340 aaPredicted RBP25.54■■□□□ 1.68
CHRNA3-207ENST00000559941 TBC1D22AQ8WUA7 517 aa25.54■■□□□ 1.68
CHRNA3-207ENST00000559941 AOX1Q06278 1338 aa25.54■■□□□ 1.68
CHRNA3-207ENST00000559941 CIAO1O76071 339 aa25.53■■□□□ 1.68
CHRNA3-207ENST00000559941 CHAF1AQ13111 956 aaPredicted RBP25.53■■□□□ 1.68
CHRNA3-207ENST00000559941 ARMC9Q7Z3E5 817 aa25.53■■□□□ 1.68
CHRNA3-207ENST00000559941 LPIN2Q92539 896 aa25.53■■□□□ 1.68
CHRNA3-207ENST00000559941 SAGE1Q9NXZ1 904 aa25.53■■□□□ 1.68
CHRNA3-207ENST00000559941 BCAR3O75815 825 aa25.52■■□□□ 1.68
CHRNA3-207ENST00000559941 SLC5A1P13866 664 aa25.52■■□□□ 1.68
CHRNA3-207ENST00000559941 GRIK5Q16478 980 aa25.52■■□□□ 1.68
CHRNA3-207ENST00000559941 SIL1Q9H173 461 aa25.52■■□□□ 1.68
CHRNA3-207ENST00000559941 VEZTQ9HBM0 779 aa25.52■■□□□ 1.68
CHRNA3-207ENST00000559941 GNAI3P08754 354 aa25.51■■□□□ 1.67
CHRNA3-207ENST00000559941 PRKG1Q13976 671 aa25.51■■□□□ 1.67
CHRNA3-207ENST00000559941 ATF7IPQ6VMQ6 1270 aa25.51■■□□□ 1.67
CHRNA3-207ENST00000559941 TRIM27P14373 513 aa25.5■■□□□ 1.67
CHRNA3-207ENST00000559941 SPDYE2Q495Y8 402 aa25.5■■□□□ 1.67
CHRNA3-207ENST00000559941 LDLRAD1Q5T700 205 aa25.5■■□□□ 1.67
CHRNA3-207ENST00000559941 DZIP1LQ8IYY4 767 aaKnown RBP25.5■■□□□ 1.67
CHRNA3-207ENST00000559941 RNF186Q9NXI6 227 aa25.5■■□□□ 1.67
CHRNA3-207ENST00000559941 CEP126Q9P2H0 1117 aa25.5■■□□□ 1.67
CHRNA3-207ENST00000559941 ZNF70Q9UC06 446 aaPredicted RBP25.5■■□□□ 1.67
CHRNA3-207ENST00000559941 ANGEL1Q9UNK9 670 aaKnown RBP25.5■■□□□ 1.67
CHRNA3-207ENST00000559941 SSC5DA1L4H1 1573 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms