RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 ZNF333Q96JL9 665 aa13.87□□□□□ -0.19
TRAF3-207ENST00000559734 MPHOSPH8Q99549 860 aa13.87□□□□□ -0.19
TRAF3-207ENST00000559734 ANKRD2Q9GZV1 360 aa13.87□□□□□ -0.19
TRAF3-207ENST00000559734 ELP3Q9H9T3 547 aa13.87□□□□□ -0.19
TRAF3-207ENST00000559734 JAG2Q9Y219 1238 aa13.87□□□□□ -0.19
TRAF3-207ENST00000559734 PTCH2Q9Y6C5 1203 aa13.87□□□□□ -0.19
TRAF3-207ENST00000559734 IGKV5-2P06315 115 aa13.86□□□□□ -0.19
TRAF3-207ENST00000559734 NEXNQ0ZGT2 675 aa13.86□□□□□ -0.19
TRAF3-207ENST00000559734 CWF19L2Q2TBE0 894 aaKnown RBP13.86□□□□□ -0.19
TRAF3-207ENST00000559734 UBE3BQ7Z3V4 1068 aa13.86□□□□□ -0.19
TRAF3-207ENST00000559734 NBPF11Q86T75 865 aa13.86□□□□□ -0.19
TRAF3-207ENST00000559734 ANKRD13AQ8IZ07 590 aa13.86□□□□□ -0.19
TRAF3-207ENST00000559734 CERS5Q8N5B7 392 aa13.86□□□□□ -0.19
TRAF3-207ENST00000559734 OPTNQ96CV9 577 aa13.86□□□□□ -0.19
TRAF3-207ENST00000559734 PTPN18Q99952 460 aa13.86□□□□□ -0.19
TRAF3-207ENST00000559734 CD209Q9NNX6 404 aa13.86□□□□□ -0.19
TRAF3-207ENST00000559734 PI4KAP2A4QPH2 592 aa13.85□□□□□ -0.19
TRAF3-207ENST00000559734 H0YGN5 161 aa13.85□□□□□ -0.19
TRAF3-207ENST00000559734 USP2O75604 605 aaPredicted RBP13.85□□□□□ -0.19
TRAF3-207ENST00000559734 ITGA6P23229 1130 aa13.85□□□□□ -0.19
TRAF3-207ENST00000559734 ARHGEF6Q15052 776 aa13.85□□□□□ -0.19
TRAF3-207ENST00000559734 TAF1CQ15572 869 aaPredicted RBP13.85□□□□□ -0.19
TRAF3-207ENST00000559734 CCDC30Q5VVM6 783 aa13.85□□□□□ -0.19
TRAF3-207ENST00000559734 PI4KAP1Q8N8J0 262 aa13.85□□□□□ -0.19
TRAF3-207ENST00000559734 C8orf58Q8NAV2 365 aa13.85□□□□□ -0.19
TRAF3-207ENST00000559734 SPDYE2BA6NHP3 402 aa13.84□□□□□ -0.19
TRAF3-207ENST00000559734 SNAP23O00161 211 aa13.84□□□□□ -0.19
TRAF3-207ENST00000559734 ECM2O94769 699 aaPredicted RBP13.84□□□□□ -0.19
TRAF3-207ENST00000559734 SPDYE6P0CI01 402 aa13.84□□□□□ -0.19
TRAF3-207ENST00000559734 CHRNDQ07001 517 aa13.84□□□□□ -0.19
TRAF3-207ENST00000559734 RASA3Q14644 834 aa13.84□□□□□ -0.19
TRAF3-207ENST00000559734 KSR2Q6VAB6 950 aa13.84□□□□□ -0.19
TRAF3-207ENST00000559734 CHRDL2Q6WN34 429 aa13.84□□□□□ -0.19
TRAF3-207ENST00000559734 SH3TC2Q8TF17 1288 aa13.84□□□□□ -0.19
TRAF3-207ENST00000559734 PRMT6Q96LA8 375 aaPredicted RBP13.84□□□□□ -0.19
TRAF3-207ENST00000559734 ZFYVE28Q9HCC9 887 aa13.84□□□□□ -0.19
TRAF3-207ENST00000559734 IFT57Q9NWB7 429 aa13.84□□□□□ -0.19
TRAF3-207ENST00000559734 AOX1Q06278 1338 aa13.84□□□□□ -0.19
TRAF3-207ENST00000559734 KIAA0100Q14667 2235 aaKnown RBP13.83□□□□□ -0.2
TRAF3-207ENST00000559734 CCL15-CCL14A0A0B4J2E2 113 aa13.83□□□□□ -0.2
TRAF3-207ENST00000559734 UNCXA6NJT0 531 aa13.83□□□□□ -0.2
TRAF3-207ENST00000559734 NEURL1BA8MQ27 555 aa13.83□□□□□ -0.2
TRAF3-207ENST00000559734 TAF5LO75529 589 aa13.83□□□□□ -0.2
TRAF3-207ENST00000559734 ZNF853P0CG23 659 aa13.83□□□□□ -0.2
TRAF3-207ENST00000559734 GNAI1P63096 354 aa13.83□□□□□ -0.2
TRAF3-207ENST00000559734 CCL15Q16663 113 aa13.83□□□□□ -0.2
TRAF3-207ENST00000559734 MTMR14Q8NCE2 650 aa13.83□□□□□ -0.2
TRAF3-207ENST00000559734 HELBQ8NG08 1087 aaPredicted RBP13.83□□□□□ -0.2
TRAF3-207ENST00000559734 ADAMTS8Q9UP79 889 aa13.83□□□□□ -0.2
TRAF3-207ENST00000559734 MYH3P11055 1940 aa13.83□□□□□ -0.2
TRAF3-207ENST00000559734 MKI67P46013 3256 aaKnown RBP13.83□□□□□ -0.2
TRAF3-207ENST00000559734 MYBBP1AQ9BQG0 1328 aaKnown RBP13.83□□□□□ -0.2
TRAF3-207ENST00000559734 HTTP42858 3142 aa13.82□□□□□ -0.2
TRAF3-207ENST00000559734 TESPA1A2RU30 521 aaPredicted RBP13.82□□□□□ -0.2
TRAF3-207ENST00000559734 CALD1Q05682 793 aaKnown RBP13.82□□□□□ -0.2
TRAF3-207ENST00000559734 BRI3BPQ8WY22 251 aa13.82□□□□□ -0.2
TRAF3-207ENST00000559734 ZNF804AQ7Z570 1209 aa13.81□□□□□ -0.2
TRAF3-207ENST00000559734 FAM43AQ8N2R8 423 aa13.81□□□□□ -0.2
TRAF3-207ENST00000559734 DPF3Q92784 378 aa13.81□□□□□ -0.2
TRAF3-207ENST00000559734 OTUD5Q96G74 571 aa13.81□□□□□ -0.2
TRAF3-207ENST00000559734 MS4A4AQ96JQ5 239 aa13.81□□□□□ -0.2
TRAF3-207ENST00000559734 STK31Q9BXU1 1019 aa13.81□□□□□ -0.2
TRAF3-207ENST00000559734 CHMP3Q9Y3E7 222 aa13.81□□□□□ -0.2
TRAF3-207ENST00000559734 LAMB1P07942 1786 aa13.81□□□□□ -0.2
TRAF3-207ENST00000559734 ECM29Q5VYK3 1845 aa13.8□□□□□ -0.2
TRAF3-207ENST00000559734 ANKRD18BA2A2Z9 1011 aa13.8□□□□□ -0.2
TRAF3-207ENST00000559734 H7C1W4 665 aa13.8□□□□□ -0.2
TRAF3-207ENST00000559734 APAF1O14727 1248 aa13.8□□□□□ -0.2
TRAF3-207ENST00000559734 GTF2A2P52657 109 aa13.8□□□□□ -0.2
TRAF3-207ENST00000559734 TNFAIP1Q13829 316 aa13.8□□□□□ -0.2
TRAF3-207ENST00000559734 KIF22Q14807 665 aa13.8□□□□□ -0.2
TRAF3-207ENST00000559734 TSPYL6Q8N831 410 aa13.8□□□□□ -0.2
TRAF3-207ENST00000559734 CHMP4AQ9BY43 222 aa13.8□□□□□ -0.2
TRAF3-207ENST00000559734 ARHGAP39Q9C0H5 1083 aa13.8□□□□□ -0.2
TRAF3-207ENST00000559734 OTOFQ9HC10 1997 aa13.8□□□□□ -0.2
TRAF3-207ENST00000559734 TCP10L2B9ZVM9 353 aa13.79□□□□□ -0.2
TRAF3-207ENST00000559734 WDHD1O75717 1129 aaPredicted RBP13.79□□□□□ -0.2
TRAF3-207ENST00000559734 VGLL4Q14135 290 aa13.79□□□□□ -0.2
TRAF3-207ENST00000559734 CDAN1Q8IWY9 1227 aa13.79□□□□□ -0.2
TRAF3-207ENST00000559734 TDRD3Q9H7E2 651 aaKnown RBP13.79□□□□□ -0.2
TRAF3-207ENST00000559734 RBM27Q9P2N5 1060 aaKnown RBP13.79□□□□□ -0.2
TRAF3-207ENST00000559734 ZNF70Q9UC06 446 aaPredicted RBP13.79□□□□□ -0.2
TRAF3-207ENST00000559734 CSADQ9Y600 493 aa13.79□□□□□ -0.2
TRAF3-207ENST00000559734 DLL1O00548 723 aa13.78□□□□□ -0.2
TRAF3-207ENST00000559734 PLIN1O60240 522 aa13.78□□□□□ -0.2
TRAF3-207ENST00000559734 IL1R1P14778 569 aa13.78□□□□□ -0.2
TRAF3-207ENST00000559734 GCKRQ14397 625 aa13.78□□□□□ -0.2
TRAF3-207ENST00000559734 SPDYE2Q495Y8 402 aa13.78□□□□□ -0.2
TRAF3-207ENST00000559734 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.78□□□□□ -0.2
TRAF3-207ENST00000559734 G2E3Q7L622 706 aa13.78□□□□□ -0.2
TRAF3-207ENST00000559734 PLA2G12BQ9BX93 195 aa13.78□□□□□ -0.2
TRAF3-207ENST00000559734 TTF2Q9UNY4 1162 aaKnown RBP13.78□□□□□ -0.2
TRAF3-207ENST00000559734 IRS2Q9Y4H2 1338 aa13.78□□□□□ -0.2
TRAF3-207ENST00000559734 FKBP1AP62942 108 aaKnown RBP13.77□□□□□ -0.21
TRAF3-207ENST00000559734 MAP3K9P80192 1104 aa13.77□□□□□ -0.21
TRAF3-207ENST00000559734 SLC17A8Q8NDX2 589 aa13.77□□□□□ -0.21
TRAF3-207ENST00000559734 TMEM39BQ9GZU3 492 aa13.77□□□□□ -0.21
TRAF3-207ENST00000559734 MYH16Q9H6N6 1097 aa13.77□□□□□ -0.21
TRAF3-207ENST00000559734 ZSWIM8A7E2V4 1837 aa13.76□□□□□ -0.21
TRAF3-207ENST00000559734 BRCA2P51587 3418 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms