RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 BEGAINQ9BUH8 593 aa15.73■□□□□ 0.11
LRRC28-214ENST00000559433 EYA2O00167 538 aa15.72■□□□□ 0.11
LRRC28-214ENST00000559433 PDE8BO95263 885 aa15.72■□□□□ 0.11
LRRC28-214ENST00000559433 GNAI3P08754 354 aa15.72■□□□□ 0.11
LRRC28-214ENST00000559433 HIBADHP31937 336 aaKnown RBP15.72■□□□□ 0.11
LRRC28-214ENST00000559433 MAP2K1Q02750 393 aaPredicted RBP15.72■□□□□ 0.11
LRRC28-214ENST00000559433 PTPN12Q05209 780 aaKnown RBP15.72■□□□□ 0.11
LRRC28-214ENST00000559433 ZKSCAN2Q63HK3 967 aa15.72■□□□□ 0.11
LRRC28-214ENST00000559433 DLK2Q6UY11 383 aa15.72■□□□□ 0.11
LRRC28-214ENST00000559433 VGLL2Q8N8G2 317 aa15.72■□□□□ 0.11
LRRC28-214ENST00000559433 C2orf69Q8N8R5 385 aa15.72■□□□□ 0.11
LRRC28-214ENST00000559433 CAPNS2Q96L46 248 aa15.72■□□□□ 0.11
LRRC28-214ENST00000559433 JAG2Q9Y219 1238 aa15.72■□□□□ 0.11
LRRC28-214ENST00000559433 TLL2Q9Y6L7 1015 aa15.72■□□□□ 0.11
LRRC28-214ENST00000559433 SASH1O94885 1247 aa15.71■□□□□ 0.11
LRRC28-214ENST00000559433 VPS37DQ86XT2 251 aa15.71■□□□□ 0.11
LRRC28-214ENST00000559433 CERS5Q8N5B7 392 aa15.71■□□□□ 0.11
LRRC28-214ENST00000559433 FAM84BQ96KN1 310 aaPredicted RBP15.71■□□□□ 0.11
LRRC28-214ENST00000559433 SIL1Q9H173 461 aa15.71■□□□□ 0.11
LRRC28-214ENST00000559433 THSD7BQ9C0I4 1608 aa15.71■□□□□ 0.11
LRRC28-214ENST00000559433 PITPNM2Q9BZ72 1349 aa15.7■□□□□ 0.1
LRRC28-214ENST00000559433 PUM3Q15397 648 aaKnown RBP15.7■□□□□ 0.1
LRRC28-214ENST00000559433 NBPF9Q3BBW0 867 aa15.7■□□□□ 0.1
LRRC28-214ENST00000559433 CAVIN4Q5BKX8 364 aa15.7■□□□□ 0.1
LRRC28-214ENST00000559433 CYP4F22Q6NT55 531 aa15.7■□□□□ 0.1
LRRC28-214ENST00000559433 SAPCD2Q86UD0 394 aa15.7■□□□□ 0.1
LRRC28-214ENST00000559433 TDRD7Q8NHU6 1098 aaKnown RBP15.7■□□□□ 0.1
LRRC28-214ENST00000559433 F8W031 263 aaPredicted RBP15.69■□□□□ 0.1
LRRC28-214ENST00000559433 HUNKP57058 714 aa15.69■□□□□ 0.1
LRRC28-214ENST00000559433 FKBP1AP62942 108 aaKnown RBP15.69■□□□□ 0.1
LRRC28-214ENST00000559433 CDCA5Q96FF9 252 aa15.69■□□□□ 0.1
LRRC28-214ENST00000559433 FAM205AQ6ZU69 1335 aa15.68■□□□□ 0.1
LRRC28-214ENST00000559433 WNT10BO00744 389 aa15.68■□□□□ 0.1
LRRC28-214ENST00000559433 FRAT2O75474 233 aaPredicted RBP15.68■□□□□ 0.1
LRRC28-214ENST00000559433 CIAO1O76071 339 aa15.68■□□□□ 0.1
LRRC28-214ENST00000559433 IFIT1P09914 478 aaKnown RBP15.68■□□□□ 0.1
LRRC28-214ENST00000559433 CTCFP49711 727 aaPredicted RBP15.68■□□□□ 0.1
LRRC28-214ENST00000559433 IFFO2Q5TF58 517 aa15.68■□□□□ 0.1
LRRC28-214ENST00000559433 ATG9AQ7Z3C6 839 aa15.68■□□□□ 0.1
LRRC28-214ENST00000559433 FBXO33Q7Z6M2 555 aa15.68■□□□□ 0.1
LRRC28-214ENST00000559433 FTSJ3Q8IY81 847 aaKnown RBP15.68■□□□□ 0.1
LRRC28-214ENST00000559433 TMEM57Q8N5G2 664 aa15.68■□□□□ 0.1
LRRC28-214ENST00000559433 HHIPL1Q96JK4 782 aa15.68■□□□□ 0.1
LRRC28-214ENST00000559433 GBA2Q9HCG7 927 aaPredicted RBP15.68■□□□□ 0.1
LRRC28-214ENST00000559433 FBXO3Q9UK99 471 aa15.68■□□□□ 0.1
LRRC28-214ENST00000559433 SCAF8Q9UPN6 1271 aaKnown RBP15.68■□□□□ 0.1
LRRC28-214ENST00000559433 IQSEC3Q9UPP2 1182 aaPredicted RBP15.68■□□□□ 0.1
LRRC28-214ENST00000559433 PA2G4Q9UQ80 394 aaKnown RBP15.68■□□□□ 0.1
LRRC28-214ENST00000559433 SRGAP3O43295 1099 aa15.67■□□□□ 0.1
LRRC28-214ENST00000559433 GNAI2P04899 355 aa15.67■□□□□ 0.1
LRRC28-214ENST00000559433 SLC5A1P13866 664 aa15.67■□□□□ 0.1
LRRC28-214ENST00000559433 FGFR2P21802 821 aa15.67■□□□□ 0.1
LRRC28-214ENST00000559433 MAP2K2P36507 400 aa15.67■□□□□ 0.1
LRRC28-214ENST00000559433 DLGAP5Q15398 846 aa15.67■□□□□ 0.1
LRRC28-214ENST00000559433 MFSD14BQ5SR56 506 aa15.67■□□□□ 0.1
LRRC28-214ENST00000559433 COL13A1Q5TAT6 717 aaPredicted RBP15.67■□□□□ 0.1
LRRC28-214ENST00000559433 PAPPA2Q9BXP8 1791 aa15.67■□□□□ 0.1
LRRC28-214ENST00000559433 NF2P35240 595 aa15.66■□□□□ 0.1
LRRC28-214ENST00000559433 IL15P40933 162 aaPredicted RBP15.66■□□□□ 0.1
LRRC28-214ENST00000559433 BCAMP50895 628 aa15.66■□□□□ 0.1
LRRC28-214ENST00000559433 CHAF1AQ13111 956 aaPredicted RBP15.66■□□□□ 0.1
LRRC28-214ENST00000559433 LPIN2Q92539 896 aa15.66■□□□□ 0.1
LRRC28-214ENST00000559433 COPRSQ9NQ92 184 aa15.66■□□□□ 0.1
LRRC28-214ENST00000559433 WBP1LQ9NX94 342 aa15.66■□□□□ 0.1
LRRC28-214ENST00000559433 CEP126Q9P2H0 1117 aa15.66■□□□□ 0.1
LRRC28-214ENST00000559433 FOXN1O15353 648 aa15.65■□□□□ 0.1
LRRC28-214ENST00000559433 MYO1BO43795 1136 aa15.65■□□□□ 0.1
LRRC28-214ENST00000559433 RBM5P52756 815 aaKnown RBP eCLIP15.65■□□□□ 0.1
LRRC28-214ENST00000559433 MTX1Q13505 466 aa15.65■□□□□ 0.1
LRRC28-214ENST00000559433 ATP2B3Q16720 1220 aa15.65■□□□□ 0.1
LRRC28-214ENST00000559433 CFAP100Q494V2 611 aa15.65■□□□□ 0.1
LRRC28-214ENST00000559433 APOBEC3FQ8IUX4 373 aaKnown RBP15.65■□□□□ 0.1
LRRC28-214ENST00000559433 ITPRIPQ8IWB1 547 aa15.65■□□□□ 0.1
LRRC28-214ENST00000559433 DZIP1LQ8IYY4 767 aaKnown RBP15.65■□□□□ 0.1
LRRC28-214ENST00000559433 TNS4Q8IZW8 715 aa15.65■□□□□ 0.1
LRRC28-214ENST00000559433 MTMR14Q8NCE2 650 aa15.65■□□□□ 0.1
LRRC28-214ENST00000559433 CCDC102AQ96A19 550 aa15.65■□□□□ 0.1
LRRC28-214ENST00000559433 ZBED3Q96IU2 234 aaPredicted RBP15.65■□□□□ 0.1
LRRC28-214ENST00000559433 AOC2O75106 756 aa15.64■□□□□ 0.09
LRRC28-214ENST00000559433 ZNF157P51786 506 aaPredicted RBP15.64■□□□□ 0.09
LRRC28-214ENST00000559433 TTLL12Q14166 644 aaPredicted RBP15.64■□□□□ 0.09
LRRC28-214ENST00000559433 RGMBQ6NW40 437 aa15.64■□□□□ 0.09
LRRC28-214ENST00000559433 TTF2Q9UNY4 1162 aaKnown RBP15.64■□□□□ 0.09
LRRC28-214ENST00000559433 PCDHAC2Q9Y5I4 1007 aa15.64■□□□□ 0.09
LRRC28-214ENST00000559433 SPDYE2BA6NHP3 402 aa15.63■□□□□ 0.09
LRRC28-214ENST00000559433 SPDYE6P0CI01 402 aa15.63■□□□□ 0.09
LRRC28-214ENST00000559433 RLBP1P12271 317 aa15.63■□□□□ 0.09
LRRC28-214ENST00000559433 NOGQ13253 232 aa15.63■□□□□ 0.09
LRRC28-214ENST00000559433 PRAMEF18Q5VWM3 479 aa15.63■□□□□ 0.09
LRRC28-214ENST00000559433 TBC1D22AQ8WUA7 517 aa15.63■□□□□ 0.09
LRRC28-214ENST00000559433 COL1A1P02452 1464 aaPredicted RBP15.63■□□□□ 0.09
LRRC28-214ENST00000559433 FKBP1BP68106 108 aa15.62■□□□□ 0.09
LRRC28-214ENST00000559433 SERPINA10Q9UK55 444 aa15.62■□□□□ 0.09
LRRC28-214ENST00000559433 PNMA6EA0A0J9YXQ4 647 aa15.61■□□□□ 0.09
LRRC28-214ENST00000559433 CLRN2A0PK11 232 aa15.61■□□□□ 0.09
LRRC28-214ENST00000559433 MYCNP04198 464 aaPredicted RBP15.61■□□□□ 0.09
LRRC28-214ENST00000559433 LBX1P52954 281 aa15.61■□□□□ 0.09
LRRC28-214ENST00000559433 PRMT6Q96LA8 375 aaPredicted RBP15.61■□□□□ 0.09
LRRC28-214ENST00000559433 C1orf115Q9H7X2 142 aa15.61■□□□□ 0.09
LRRC28-214ENST00000559433 VEZTQ9HBM0 779 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms