RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 TRPA1O75762 1119 aa18.84■□□□□ 0.61
LRRC28-213ENST00000559399 KAZALD1Q96I82 304 aa18.84■□□□□ 0.61
LRRC28-213ENST00000559399 F8W031 263 aaPredicted RBP18.83■□□□□ 0.6
LRRC28-213ENST00000559399 DGKZQ13574 1117 aa18.83■□□□□ 0.6
LRRC28-213ENST00000559399 UBE4AQ14139 1066 aa18.83■□□□□ 0.6
LRRC28-213ENST00000559399 MTMR14Q8NCE2 650 aa18.83■□□□□ 0.6
LRRC28-213ENST00000559399 JAG2Q9Y219 1238 aa18.83■□□□□ 0.6
LRRC28-213ENST00000559399 COL1A1P02452 1464 aaPredicted RBP18.83■□□□□ 0.6
LRRC28-213ENST00000559399 MROH5Q6ZUA9 1318 aa18.82■□□□□ 0.6
LRRC28-213ENST00000559399 ZNF646O15015 1829 aaPredicted RBP18.82■□□□□ 0.6
LRRC28-213ENST00000559399 RABL6Q3YEC7 729 aaPredicted RBP18.82■□□□□ 0.6
LRRC28-213ENST00000559399 ARMC9Q7Z3E5 817 aa18.82■□□□□ 0.6
LRRC28-213ENST00000559399 SSH1Q8WYL5 1049 aa18.82■□□□□ 0.6
LRRC28-213ENST00000559399 DEFB129Q9H1M3 183 aa18.82■□□□□ 0.6
LRRC28-213ENST00000559399 BICC1Q9H694 974 aaKnown RBP18.82■□□□□ 0.6
LRRC28-213ENST00000559399 SPDYE2BA6NHP3 402 aa18.81■□□□□ 0.6
LRRC28-213ENST00000559399 MYO1BO43795 1136 aa18.81■□□□□ 0.6
LRRC28-213ENST00000559399 SPDYE6P0CI01 402 aa18.81■□□□□ 0.6
LRRC28-213ENST00000559399 CFAP100Q494V2 611 aa18.81■□□□□ 0.6
LRRC28-213ENST00000559399 PUS3Q9BZE2 481 aaKnown RBP18.81■□□□□ 0.6
LRRC28-213ENST00000559399 PPP2R3BQ9Y5P8 575 aa18.81■□□□□ 0.6
LRRC28-213ENST00000559399 CACNA1FO60840 1977 aa18.81■□□□□ 0.6
LRRC28-213ENST00000559399 FAM205AQ6ZU69 1335 aa18.8■□□□□ 0.6
LRRC28-213ENST00000559399 HIBADHP31937 336 aaKnown RBP18.8■□□□□ 0.6
LRRC28-213ENST00000559399 GYG1P46976 350 aa18.8■□□□□ 0.6
LRRC28-213ENST00000559399 SLFN5Q08AF3 891 aa18.8■□□□□ 0.6
LRRC28-213ENST00000559399 TDRD7Q8NHU6 1098 aaKnown RBP18.8■□□□□ 0.6
LRRC28-213ENST00000559399 RIPOR2Q9Y4F9 1068 aa18.8■□□□□ 0.6
LRRC28-213ENST00000559399 PCDHAC2Q9Y5I4 1007 aa18.8■□□□□ 0.6
LRRC28-213ENST00000559399 CLRN2A0PK11 232 aa18.79■□□□□ 0.6
LRRC28-213ENST00000559399 PRKG1Q13976 671 aa18.79■□□□□ 0.6
LRRC28-213ENST00000559399 MFSD14BQ5SR56 506 aa18.79■□□□□ 0.6
LRRC28-213ENST00000559399 ANKRD44Q8N8A2 993 aa18.79■□□□□ 0.6
LRRC28-213ENST00000559399 RBM5P52756 815 aaKnown RBP eCLIP18.78■□□□□ 0.6
LRRC28-213ENST00000559399 PTPN12Q05209 780 aaKnown RBP18.78■□□□□ 0.6
LRRC28-213ENST00000559399 LDLRAD1Q5T700 205 aa18.78■□□□□ 0.6
LRRC28-213ENST00000559399 FAM84BQ96KN1 310 aaPredicted RBP18.78■□□□□ 0.6
LRRC28-213ENST00000559399 VEZTQ9HBM0 779 aa18.78■□□□□ 0.6
LRRC28-213ENST00000559399 ANGEL1Q9UNK9 670 aaKnown RBP18.78■□□□□ 0.6
LRRC28-213ENST00000559399 SREBF2Q12772 1141 aa18.77■□□□□ 0.6
LRRC28-213ENST00000559399 MKRN3Q13064 507 aaKnown RBP18.77■□□□□ 0.6
LRRC28-213ENST00000559399 ALDH1L2Q3SY69 923 aa18.77■□□□□ 0.6
LRRC28-213ENST00000559399 METTL24Q5JXM2 366 aa18.77■□□□□ 0.6
LRRC28-213ENST00000559399 VPS37DQ86XT2 251 aa18.77■□□□□ 0.6
LRRC28-213ENST00000559399 PRMT6Q96LA8 375 aaPredicted RBP18.77■□□□□ 0.6
LRRC28-213ENST00000559399 PPP1R12BO60237 982 aaPredicted RBP18.76■□□□□ 0.59
LRRC28-213ENST00000559399 LRRC24Q50LG9 513 aa18.76■□□□□ 0.59
LRRC28-213ENST00000559399 CDCA7LQ96GN5 454 aa18.76■□□□□ 0.59
LRRC28-213ENST00000559399 USP44Q9H0E7 712 aa18.76■□□□□ 0.59
LRRC28-213ENST00000559399 SMC4Q9NTJ3 1288 aa18.76■□□□□ 0.59
LRRC28-213ENST00000559399 SERPINA10Q9UK55 444 aa18.76■□□□□ 0.59
LRRC28-213ENST00000559399 TTF2Q9UNY4 1162 aaKnown RBP18.76■□□□□ 0.59
LRRC28-213ENST00000559399 AOX1Q06278 1338 aa18.75■□□□□ 0.59
LRRC28-213ENST00000559399 POLR2AP24928 1970 aaKnown RBP18.75■□□□□ 0.59
LRRC28-213ENST00000559399 TM4SF4P48230 202 aa18.75■□□□□ 0.59
LRRC28-213ENST00000559399 MAP3K11Q16584 847 aa18.75■□□□□ 0.59
LRRC28-213ENST00000559399 SUPT20HL1Q3ZLR7 823 aa18.75■□□□□ 0.59
LRRC28-213ENST00000559399 CAVIN4Q5BKX8 364 aa18.75■□□□□ 0.59
LRRC28-213ENST00000559399 FZD1Q9UP38 647 aa18.75■□□□□ 0.59
LRRC28-213ENST00000559399 SSC5DA1L4H1 1573 aa18.75■□□□□ 0.59
LRRC28-213ENST00000559399 A0A1B0GUL6 1792 aa18.74■□□□□ 0.59
LRRC28-213ENST00000559399 PDE8BO95263 885 aa18.74■□□□□ 0.59
LRRC28-213ENST00000559399 TNFAIP1Q13829 316 aa18.74■□□□□ 0.59
LRRC28-213ENST00000559399 SPRYD7Q5W111 196 aa18.74■□□□□ 0.59
LRRC28-213ENST00000559399 FBXO33Q7Z6M2 555 aa18.74■□□□□ 0.59
LRRC28-213ENST00000559399 CTU1Q7Z7A3 348 aaKnown RBP18.74■□□□□ 0.59
LRRC28-213ENST00000559399 VGLL2Q8N8G2 317 aa18.74■□□□□ 0.59
LRRC28-213ENST00000559399 TBC1D8O95759 1140 aa18.73■□□□□ 0.59
LRRC28-213ENST00000559399 RASA3Q14644 834 aa18.73■□□□□ 0.59
LRRC28-213ENST00000559399 SPDYE2Q495Y8 402 aa18.73■□□□□ 0.59
LRRC28-213ENST00000559399 KLHDC4Q8TBB5 520 aa18.73■□□□□ 0.59
LRRC28-213ENST00000559399 FRAT2O75474 233 aaPredicted RBP18.72■□□□□ 0.59
LRRC28-213ENST00000559399 CT47B1P0C2W7 299 aaPredicted RBP18.72■□□□□ 0.59
LRRC28-213ENST00000559399 CRKP46108 304 aa18.72■□□□□ 0.59
LRRC28-213ENST00000559399 RGS19P49795 217 aa18.72■□□□□ 0.59
LRRC28-213ENST00000559399 CHAF1AQ13111 956 aaPredicted RBP18.72■□□□□ 0.59
LRRC28-213ENST00000559399 NBPF12Q5TAG4 269 aaPredicted RBP18.72■□□□□ 0.59
LRRC28-213ENST00000559399 TBC1D22AQ8WUA7 517 aa18.72■□□□□ 0.59
LRRC28-213ENST00000559399 SLC10A4Q96EP9 437 aa18.72■□□□□ 0.59
LRRC28-213ENST00000559399 ZNF70Q9UC06 446 aaPredicted RBP18.72■□□□□ 0.59
LRRC28-213ENST00000559399 IQSEC3Q9UPP2 1182 aaPredicted RBP18.72■□□□□ 0.59
LRRC28-213ENST00000559399 UNCXA6NJT0 531 aa18.71■□□□□ 0.59
LRRC28-213ENST00000559399 IREB2P48200 963 aaKnown RBP18.71■□□□□ 0.59
LRRC28-213ENST00000559399 MLLT1Q03111 559 aaPredicted RBP18.71■□□□□ 0.59
LRRC28-213ENST00000559399 PUM3Q15397 648 aaKnown RBP18.71■□□□□ 0.59
LRRC28-213ENST00000559399 DZIP1LQ8IYY4 767 aaKnown RBP18.71■□□□□ 0.59
LRRC28-213ENST00000559399 TRMT2AQ8IZ69 625 aaKnown RBP18.71■□□□□ 0.59
LRRC28-213ENST00000559399 ZNF296Q8WUU4 475 aaPredicted RBP18.71■□□□□ 0.59
LRRC28-213ENST00000559399 TDRD3Q9H7E2 651 aaKnown RBP18.71■□□□□ 0.59
LRRC28-213ENST00000559399 KIF16BQ96L93 1317 aa18.71■□□□□ 0.59
LRRC28-213ENST00000559399 MANSC4A6NHS7 340 aaPredicted RBP18.7■□□□□ 0.58
LRRC28-213ENST00000559399 IFIT1P09914 478 aaKnown RBP18.7■□□□□ 0.58
LRRC28-213ENST00000559399 ZBTB48P10074 688 aaPredicted RBP18.7■□□□□ 0.58
LRRC28-213ENST00000559399 NOM1Q5C9Z4 860 aaKnown RBP18.7■□□□□ 0.58
LRRC28-213ENST00000559399 CLMNQ96JQ2 1002 aa18.7■□□□□ 0.58
LRRC28-213ENST00000559399 CFHR5Q9BXR6 569 aa18.7■□□□□ 0.58
LRRC28-213ENST00000559399 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.7■□□□□ 0.58
LRRC28-213ENST00000559399 GPR25O00155 361 aa18.69■□□□□ 0.58
LRRC28-213ENST00000559399 EYA2O00167 538 aa18.69■□□□□ 0.58
LRRC28-213ENST00000559399 ALDH1A1P00352 501 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms