RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 SCARF1Q14162 830 aa5.42□□□□□ -1.54
SNX1-205ENST00000559339 DLGAP5Q15398 846 aa5.42□□□□□ -1.54
SNX1-205ENST00000559339 MFSD14BQ5SR56 506 aa5.42□□□□□ -1.54
SNX1-205ENST00000559339 ANGEL2Q5VTE6 544 aaKnown RBP5.42□□□□□ -1.54
SNX1-205ENST00000559339 PAXIP1Q6ZW49 1069 aaPredicted RBP5.42□□□□□ -1.54
SNX1-205ENST00000559339 KIAA0825Q8IV33 1275 aa5.42□□□□□ -1.54
SNX1-205ENST00000559339 DNAJC5GQ8N7S2 189 aa5.42□□□□□ -1.54
SNX1-205ENST00000559339 TRPM4Q8TD43 1214 aa5.42□□□□□ -1.54
SNX1-205ENST00000559339 TBC1D22AQ8WUA7 517 aa5.42□□□□□ -1.54
SNX1-205ENST00000559339 FAM84BQ96KN1 310 aaPredicted RBP5.42□□□□□ -1.54
SNX1-205ENST00000559339 COPRSQ9NQ92 184 aa5.42□□□□□ -1.54
SNX1-205ENST00000559339 GGA3Q9NZ52 723 aa5.42□□□□□ -1.54
SNX1-205ENST00000559339 TAF1P21675 1872 aa5.42□□□□□ -1.54
SNX1-205ENST00000559339 MYH3P11055 1940 aa5.42□□□□□ -1.54
SNX1-205ENST00000559339 ZNF609O15014 1411 aa5.41□□□□□ -1.54
SNX1-205ENST00000559339 COL4A1P02462 1669 aa5.41□□□□□ -1.54
SNX1-205ENST00000559339 SHTN1A0MZ66 631 aa5.41□□□□□ -1.54
SNX1-205ENST00000559339 F8W031 263 aaPredicted RBP5.41□□□□□ -1.54
SNX1-205ENST00000559339 TRAF5O00463 557 aa5.41□□□□□ -1.54
SNX1-205ENST00000559339 WNT10BO00744 389 aa5.41□□□□□ -1.54
SNX1-205ENST00000559339 ZBTB7BO15156 539 aaPredicted RBP5.41□□□□□ -1.54
SNX1-205ENST00000559339 NF2P35240 595 aa5.41□□□□□ -1.54
SNX1-205ENST00000559339 ECE1P42892 770 aa5.41□□□□□ -1.54
SNX1-205ENST00000559339 RFX5P48382 616 aaPredicted RBP5.41□□□□□ -1.54
SNX1-205ENST00000559339 OS9Q13438 667 aaPredicted RBP5.41□□□□□ -1.54
SNX1-205ENST00000559339 ATP2B3Q16720 1220 aa5.41□□□□□ -1.54
SNX1-205ENST00000559339 DEFB115Q30KQ5 88 aa5.41□□□□□ -1.54
SNX1-205ENST00000559339 USP48Q86UV5 1035 aa5.41□□□□□ -1.54
SNX1-205ENST00000559339 VGLL2Q8N8G2 317 aa5.41□□□□□ -1.54
SNX1-205ENST00000559339 C2orf69Q8N8R5 385 aa5.41□□□□□ -1.54
SNX1-205ENST00000559339 TDRD7Q8NHU6 1098 aaKnown RBP5.41□□□□□ -1.54
SNX1-205ENST00000559339 WDR66Q8TBY9 1149 aa5.41□□□□□ -1.54
SNX1-205ENST00000559339 GMLQ99445 158 aa5.41□□□□□ -1.54
SNX1-205ENST00000559339 GLIS2Q9BZE0 524 aaPredicted RBP5.41□□□□□ -1.54
SNX1-205ENST00000559339 MKRN1Q9UHC7 482 aaKnown RBP5.41□□□□□ -1.54
SNX1-205ENST00000559339 DDX19BQ9UMR2 479 aa5.41□□□□□ -1.54
SNX1-205ENST00000559339 SUGT1Q9Y2Z0 365 aa5.41□□□□□ -1.54
SNX1-205ENST00000559339 PITPNM2Q9BZ72 1349 aa5.41□□□□□ -1.54
SNX1-205ENST00000559339 LTBP1Q14766 1721 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 RASSF10A6NK89 507 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 SEMA3EO15041 775 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 HMMRO75330 724 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 EGFRP00533 1210 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 FGFR2P21802 821 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 BCAMP50895 628 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 FKBP1BP68106 108 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 ATP8B2P98198 1209 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 CHAF1AQ13111 956 aaPredicted RBP5.4□□□□□ -1.54
SNX1-205ENST00000559339 GRM1Q13255 1194 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 TNFAIP1Q13829 316 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 MVPQ14764 893 aaKnown RBP5.4□□□□□ -1.54
SNX1-205ENST00000559339 NBPF9Q3BBW0 867 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 GORABQ5T7V8 394 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 CST9Q5W186 159 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 ATG9AQ7Z3C6 839 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 FBXO33Q7Z6M2 555 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 SAPCD2Q86UD0 394 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 APOBEC3FQ8IUX4 373 aaKnown RBP5.4□□□□□ -1.54
SNX1-205ENST00000559339 ZGPATQ8N5A5 531 aaKnown RBP5.4□□□□□ -1.54
SNX1-205ENST00000559339 JMYQ8N9B5 988 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 HHIPL1Q96JK4 782 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 YTHDC1Q96MU7 727 aaKnown RBP5.4□□□□□ -1.54
SNX1-205ENST00000559339 BEGAINQ9BUH8 593 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 MXD3Q9BW11 206 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 SERPINA10Q9UK55 444 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 TTF2Q9UNY4 1162 aaKnown RBP5.4□□□□□ -1.54
SNX1-205ENST00000559339 IQSEC3Q9UPP2 1182 aaPredicted RBP5.4□□□□□ -1.54
SNX1-205ENST00000559339 PA2G4Q9UQ80 394 aaKnown RBP5.4□□□□□ -1.54
SNX1-205ENST00000559339 JAG2Q9Y219 1238 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 TLL2Q9Y6L7 1015 aa5.4□□□□□ -1.54
SNX1-205ENST00000559339 MAST3O60307 1309 aa5.4□□□□□ -1.55
SNX1-205ENST00000559339 FAM205AQ6ZU69 1335 aa5.4□□□□□ -1.55
SNX1-205ENST00000559339 IRS2Q9Y4H2 1338 aa5.4□□□□□ -1.55
SNX1-205ENST00000559339 PNMA6EA0A0J9YXQ4 647 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 A0A1B0GUL7 405 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 SPDYE2BA6NHP3 402 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 ADM5C9JUS6 153 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 SURF6O75683 361 aaKnown RBP5.39□□□□□ -1.55
SNX1-205ENST00000559339 SPDYE6P0CI01 402 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 RLBP1P12271 317 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 TNNI2P48788 182 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 TIMM10P62072 90 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 MAP2K1Q02750 393 aaPredicted RBP5.39□□□□□ -1.55
SNX1-205ENST00000559339 TFCP2Q12800 502 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 TTLL12Q14166 644 aaPredicted RBP5.39□□□□□ -1.55
SNX1-205ENST00000559339 PDE3AQ14432 1141 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 SUPT20HL1Q3ZLR7 823 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 CFAP100Q494V2 611 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 HSP90AB4PQ58FF6 505 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 CCDC102BQ68D86 513 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 ERC1Q8IUD2 1116 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 SLF2Q8IX21 1173 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 RPAP2Q8IXW5 612 aaPredicted RBP5.39□□□□□ -1.55
SNX1-205ENST00000559339 CERS5Q8N5B7 392 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 MTMR14Q8NCE2 650 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 PANK1Q8TE04 598 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 TEKT1Q969V4 418 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 CCDC102AQ96A19 550 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 AIDAQ96BJ3 306 aa5.39□□□□□ -1.55
SNX1-205ENST00000559339 NEUROD6Q96NK8 337 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms