RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 MYO1BO43795 1136 aa22.25■■□□□ 1.15
TPM1-218ENST00000559281 CAVIN4Q5BKX8 364 aa22.25■■□□□ 1.15
TPM1-218ENST00000559281 CERS5Q8N5B7 392 aa22.25■■□□□ 1.15
TPM1-218ENST00000559281 MTMR14Q8NCE2 650 aa22.25■■□□□ 1.15
TPM1-218ENST00000559281 TDRD7Q8NHU6 1098 aaKnown RBP22.25■■□□□ 1.15
TPM1-218ENST00000559281 FAM84BQ96KN1 310 aaPredicted RBP22.25■■□□□ 1.15
TPM1-218ENST00000559281 PSME4Q14997 1843 aa22.24■■□□□ 1.15
TPM1-218ENST00000559281 FAM155AB1AL88 458 aaPredicted RBP22.24■■□□□ 1.15
TPM1-218ENST00000559281 F8W031 263 aaPredicted RBP22.24■■□□□ 1.15
TPM1-218ENST00000559281 CAPN15O75808 1086 aa22.24■■□□□ 1.15
TPM1-218ENST00000559281 UBTFL1P0CB47 393 aaPredicted RBP22.24■■□□□ 1.15
TPM1-218ENST00000559281 GYG1P46976 350 aa22.24■■□□□ 1.15
TPM1-218ENST00000559281 TTLL12Q14166 644 aaPredicted RBP22.24■■□□□ 1.15
TPM1-218ENST00000559281 ZBED3Q96IU2 234 aaPredicted RBP22.24■■□□□ 1.15
TPM1-218ENST00000559281 SCAF8Q9UPN6 1271 aaKnown RBP22.24■■□□□ 1.15
TPM1-218ENST00000559281 FAM205AQ6ZU69 1335 aa22.24■■□□□ 1.15
TPM1-218ENST00000559281 PDE8BO95263 885 aa22.23■■□□□ 1.15
TPM1-218ENST00000559281 LRRC24Q50LG9 513 aa22.23■■□□□ 1.15
TPM1-218ENST00000559281 PRAMEF18Q5VWM3 479 aa22.23■■□□□ 1.15
TPM1-218ENST00000559281 REM2Q8IYK8 340 aaPredicted RBP22.23■■□□□ 1.15
TPM1-218ENST00000559281 FRAT2O75474 233 aaPredicted RBP22.22■■□□□ 1.15
TPM1-218ENST00000559281 SLC10A3P09131 477 aa22.22■■□□□ 1.15
TPM1-218ENST00000559281 RARSP54136 660 aaKnown RBP22.22■■□□□ 1.15
TPM1-218ENST00000559281 KIF23Q02241 960 aaPredicted RBP22.22■■□□□ 1.15
TPM1-218ENST00000559281 CFAP100Q494V2 611 aa22.22■■□□□ 1.15
TPM1-218ENST00000559281 JAG2Q9Y219 1238 aa22.22■■□□□ 1.15
TPM1-218ENST00000559281 POLR2AP24928 1970 aaKnown RBP22.21■■□□□ 1.15
TPM1-218ENST00000559281 THSD7BQ9C0I4 1608 aa22.21■■□□□ 1.15
TPM1-218ENST00000559281 RBM5P52756 815 aaKnown RBP eCLIP22.21■■□□□ 1.15
TPM1-218ENST00000559281 MFSD14BQ5SR56 506 aa22.21■■□□□ 1.15
TPM1-218ENST00000559281 FBXO33Q7Z6M2 555 aa22.21■■□□□ 1.15
TPM1-218ENST00000559281 ARHGAP45Q92619 1136 aa22.21■■□□□ 1.15
TPM1-218ENST00000559281 ZIC5Q96T25 663 aa22.21■■□□□ 1.15
TPM1-218ENST00000559281 IFIT1P09914 478 aaKnown RBP22.2■■□□□ 1.14
TPM1-218ENST00000559281 ARMC9Q7Z3E5 817 aa22.2■■□□□ 1.14
TPM1-218ENST00000559281 KLHDC4Q8TBB5 520 aa22.2■■□□□ 1.14
TPM1-218ENST00000559281 DEFB129Q9H1M3 183 aa22.2■■□□□ 1.14
TPM1-218ENST00000559281 TSKSQ9UJT2 592 aa22.2■■□□□ 1.14
TPM1-218ENST00000559281 KIF16BQ96L93 1317 aa22.2■■□□□ 1.14
TPM1-218ENST00000559281 SPDYE2BA6NHP3 402 aa22.19■■□□□ 1.14
TPM1-218ENST00000559281 UBE2Q2LH0YL09 131 aa22.19■■□□□ 1.14
TPM1-218ENST00000559281 EYA2O00167 538 aa22.19■■□□□ 1.14
TPM1-218ENST00000559281 IPO8O15397 1037 aaKnown RBP22.19■■□□□ 1.14
TPM1-218ENST00000559281 SPDYE6P0CI01 402 aa22.19■■□□□ 1.14
TPM1-218ENST00000559281 PUM3Q15397 648 aaKnown RBP22.19■■□□□ 1.14
TPM1-218ENST00000559281 PPP2R3BQ9Y5P8 575 aa22.19■■□□□ 1.14
TPM1-218ENST00000559281 DIEXFQ68CQ4 756 aaKnown RBP22.18■■□□□ 1.14
TPM1-218ENST00000559281 MOB2Q70IA6 237 aa22.18■■□□□ 1.14
TPM1-218ENST00000559281 RASAL3Q86YV0 1011 aa22.18■■□□□ 1.14
TPM1-218ENST00000559281 VGLL2Q8N8G2 317 aa22.18■■□□□ 1.14
TPM1-218ENST00000559281 TBC1D22AQ8WUA7 517 aa22.18■■□□□ 1.14
TPM1-218ENST00000559281 PRMT6Q96LA8 375 aaPredicted RBP22.18■■□□□ 1.14
TPM1-218ENST00000559281 SAGE1Q9NXZ1 904 aa22.18■■□□□ 1.14
TPM1-218ENST00000559281 SERPINA10Q9UK55 444 aa22.18■■□□□ 1.14
TPM1-218ENST00000559281 FBXO3Q9UK99 471 aa22.18■■□□□ 1.14
TPM1-218ENST00000559281 TTF2Q9UNY4 1162 aaKnown RBP22.18■■□□□ 1.14
TPM1-218ENST00000559281 RFX5P48382 616 aaPredicted RBP22.17■■□□□ 1.14
TPM1-218ENST00000559281 PTPN12Q05209 780 aaKnown RBP22.17■■□□□ 1.14
TPM1-218ENST00000559281 SUPT20HL1Q3ZLR7 823 aa22.16■■□□□ 1.14
TPM1-218ENST00000559281 CSRNP1Q96S65 589 aa22.16■■□□□ 1.14
TPM1-218ENST00000559281 VEZTQ9HBM0 779 aa22.16■■□□□ 1.14
TPM1-218ENST00000559281 CLRN2A0PK11 232 aa22.15■■□□□ 1.14
TPM1-218ENST00000559281 PPP1R12BO60237 982 aaPredicted RBP22.15■■□□□ 1.14
TPM1-218ENST00000559281 SLC5A1P13866 664 aa22.15■■□□□ 1.14
TPM1-218ENST00000559281 CHAF1AQ13111 956 aaPredicted RBP22.15■■□□□ 1.14
TPM1-218ENST00000559281 LPIN2Q92539 896 aa22.15■■□□□ 1.14
TPM1-218ENST00000559281 IQSEC3Q9UPP2 1182 aaPredicted RBP22.15■■□□□ 1.14
TPM1-218ENST00000559281 COL1A1P02452 1464 aaPredicted RBP22.15■■□□□ 1.14
TPM1-218ENST00000559281 CIAO1O76071 339 aa22.14■■□□□ 1.13
TPM1-218ENST00000559281 GNAI3P08754 354 aa22.14■■□□□ 1.13
TPM1-218ENST00000559281 FGFR2P21802 821 aa22.14■■□□□ 1.13
TPM1-218ENST00000559281 BCAMP50895 628 aa22.14■■□□□ 1.13
TPM1-218ENST00000559281 TNFAIP1Q13829 316 aa22.14■■□□□ 1.13
TPM1-218ENST00000559281 PRKG1Q13976 671 aa22.14■■□□□ 1.13
TPM1-218ENST00000559281 INTS3Q68E01 1043 aaKnown RBP22.14■■□□□ 1.13
TPM1-218ENST00000559281 MIER1Q8N108 512 aa22.14■■□□□ 1.13
TPM1-218ENST00000559281 RNF186Q9NXI6 227 aa22.14■■□□□ 1.13
TPM1-218ENST00000559281 CEP126Q9P2H0 1117 aa22.14■■□□□ 1.13
TPM1-218ENST00000559281 PCDHAC2Q9Y5I4 1007 aa22.14■■□□□ 1.13
TPM1-218ENST00000559281 PAPPA2Q9BXP8 1791 aa22.14■■□□□ 1.13
TPM1-218ENST00000559281 TRPA1O75762 1119 aa22.13■■□□□ 1.13
TPM1-218ENST00000559281 HDLBPQ00341 1268 aaKnown RBP22.13■■□□□ 1.13
TPM1-218ENST00000559281 ANGEL1Q9UNK9 670 aaKnown RBP22.13■■□□□ 1.13
TPM1-218ENST00000559281 LRRFIP2Q9Y608 721 aaKnown RBP22.13■■□□□ 1.13
TPM1-218ENST00000559281 DZIP1LQ8IYY4 767 aaKnown RBP22.12■■□□□ 1.13
TPM1-218ENST00000559281 SIL1Q9H173 461 aa22.12■■□□□ 1.13
TPM1-218ENST00000559281 SUGT1Q9Y2Z0 365 aa22.12■■□□□ 1.13
TPM1-218ENST00000559281 UNCXA6NJT0 531 aa22.11■■□□□ 1.13
TPM1-218ENST00000559281 IL15P40933 162 aaPredicted RBP22.11■■□□□ 1.13
TPM1-218ENST00000559281 CRKP46108 304 aa22.11■■□□□ 1.13
TPM1-218ENST00000559281 HNRNPUQ00839 825 aaKnown RBP eCLIP22.11■■□□□ 1.13
TPM1-218ENST00000559281 RASA3Q14644 834 aa22.11■■□□□ 1.13
TPM1-218ENST00000559281 LDLRAD1Q5T700 205 aa22.11■■□□□ 1.13
TPM1-218ENST00000559281 ATG9AQ7Z3C6 839 aa22.11■■□□□ 1.13
TPM1-218ENST00000559281 FRAT1Q92837 279 aaPredicted RBP22.11■■□□□ 1.13
TPM1-218ENST00000559281 ABHD8Q96I13 439 aa22.11■■□□□ 1.13
TPM1-218ENST00000559281 MEIS3Q99687 375 aa22.11■■□□□ 1.13
TPM1-218ENST00000559281 MRIQ9BWK5 157 aa22.11■■□□□ 1.13
TPM1-218ENST00000559281 ZNF70Q9UC06 446 aaPredicted RBP22.11■■□□□ 1.13
TPM1-218ENST00000559281 ZNF646O15015 1829 aaPredicted RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms