RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 POTEEQ6S8J3 1075 aa7.68□□□□□ -1.18
CTDSPL2-204ENST00000558966 DDX46Q7L014 1031 aaKnown RBP7.68□□□□□ -1.18
CTDSPL2-204ENST00000558966 GRAPLQ8TC17 118 aaPredicted RBP7.68□□□□□ -1.18
CTDSPL2-204ENST00000558966 DNAAF4Q8WXU2 420 aa7.68□□□□□ -1.18
CTDSPL2-204ENST00000558966 SEPT9Q9UHD8 586 aaPredicted RBP7.68□□□□□ -1.18
CTDSPL2-204ENST00000558966 ATP6V0A2Q9Y487 856 aa7.68□□□□□ -1.18
CTDSPL2-204ENST00000558966 LTBP1Q14766 1721 aa7.68□□□□□ -1.18
CTDSPL2-204ENST00000558966 BBOX1O75936 387 aa7.68□□□□□ -1.18
CTDSPL2-204ENST00000558966 IARSP41252 1262 aaKnown RBP7.68□□□□□ -1.18
CTDSPL2-204ENST00000558966 NEXNQ0ZGT2 675 aa7.68□□□□□ -1.18
CTDSPL2-204ENST00000558966 RSBN1LQ6PCB5 846 aaPredicted RBP7.68□□□□□ -1.18
CTDSPL2-204ENST00000558966 CELF1Q92879 486 aaKnown RBP7.68□□□□□ -1.18
CTDSPL2-204ENST00000558966 POM121Q96HA1 1249 aa7.68□□□□□ -1.18
CTDSPL2-204ENST00000558966 CDHR2Q9BYE9 1310 aa7.68□□□□□ -1.18
CTDSPL2-204ENST00000558966 A6NJR5 290 aa7.67□□□□□ -1.18
CTDSPL2-204ENST00000558966 POTECB2RU33 542 aa7.67□□□□□ -1.18
CTDSPL2-204ENST00000558966 F6X3S4 739 aa7.67□□□□□ -1.18
CTDSPL2-204ENST00000558966 SPTLC1O15269 473 aa7.67□□□□□ -1.18
CTDSPL2-204ENST00000558966 PDE8AO60658 829 aa7.67□□□□□ -1.18
CTDSPL2-204ENST00000558966 DMRTA1Q5VZB9 504 aa7.67□□□□□ -1.18
CTDSPL2-204ENST00000558966 SP8Q8IXZ3 490 aa7.67□□□□□ -1.18
CTDSPL2-204ENST00000558966 TRMT2AQ8IZ69 625 aaKnown RBP7.67□□□□□ -1.18
CTDSPL2-204ENST00000558966 LINS1Q8NG48 757 aa7.67□□□□□ -1.18
CTDSPL2-204ENST00000558966 RRAGCQ9HB90 399 aa7.67□□□□□ -1.18
CTDSPL2-204ENST00000558966 SNRKQ9NRH2 765 aa7.67□□□□□ -1.18
CTDSPL2-204ENST00000558966 ZNF541Q9H0D2 1346 aa7.67□□□□□ -1.18
CTDSPL2-204ENST00000558966 H7C1W4 665 aa7.66□□□□□ -1.18
CTDSPL2-204ENST00000558966 CASP7P55210 303 aa7.66□□□□□ -1.18
CTDSPL2-204ENST00000558966 GCKRQ14397 625 aa7.66□□□□□ -1.18
CTDSPL2-204ENST00000558966 GRIPAP1Q4V328 841 aa7.66□□□□□ -1.18
CTDSPL2-204ENST00000558966 UBE3BQ7Z3V4 1068 aa7.66□□□□□ -1.18
CTDSPL2-204ENST00000558966 RTFDC1Q9BY42 306 aaPredicted RBP7.66□□□□□ -1.18
CTDSPL2-204ENST00000558966 SEC31BQ9NQW1 1179 aa7.66□□□□□ -1.18
CTDSPL2-204ENST00000558966 PCDHB15Q9Y5E8 787 aa7.66□□□□□ -1.18
CTDSPL2-204ENST00000558966 SPEF2Q9C093 1822 aa7.66□□□□□ -1.18
CTDSPL2-204ENST00000558966 FZD9O00144 591 aa7.66□□□□□ -1.18
CTDSPL2-204ENST00000558966 ARHGAP33O14559 1287 aa7.66□□□□□ -1.18
CTDSPL2-204ENST00000558966 TRAK2O60296 914 aa7.66□□□□□ -1.18
CTDSPL2-204ENST00000558966 TOMM70O94826 608 aa7.66□□□□□ -1.18
CTDSPL2-204ENST00000558966 DDNO94850 711 aaPredicted RBP7.66□□□□□ -1.18
CTDSPL2-204ENST00000558966 HSP90B1P14625 803 aaKnown RBP7.66□□□□□ -1.18
CTDSPL2-204ENST00000558966 CTSWP56202 376 aa7.66□□□□□ -1.18
CTDSPL2-204ENST00000558966 QPCTQ16769 361 aa7.66□□□□□ -1.18
CTDSPL2-204ENST00000558966 CCDC152Q4G0S7 254 aa7.66□□□□□ -1.18
CTDSPL2-204ENST00000558966 SWT1Q5T5J6 900 aaKnown RBP7.66□□□□□ -1.18
CTDSPL2-204ENST00000558966 BEND3Q5T5X7 828 aa7.66□□□□□ -1.18
CTDSPL2-204ENST00000558966 TMC4Q7Z404 712 aa7.66□□□□□ -1.18
CTDSPL2-204ENST00000558966 MRPL50Q8N5N7 158 aaKnown RBP7.66□□□□□ -1.18
CTDSPL2-204ENST00000558966 CCDC85AQ96PX6 553 aaPredicted RBP7.66□□□□□ -1.18
CTDSPL2-204ENST00000558966 VEGFAP15692 232 aaPredicted RBP7.65□□□□□ -1.18
CTDSPL2-204ENST00000558966 RPS8P62241 208 aaKnown RBP7.65□□□□□ -1.18
CTDSPL2-204ENST00000558966 AOC3Q16853 763 aa7.65□□□□□ -1.18
CTDSPL2-204ENST00000558966 DPP8Q6V1X1 898 aaPredicted RBP7.65□□□□□ -1.18
CTDSPL2-204ENST00000558966 LARGE2Q8N3Y3 721 aa7.65□□□□□ -1.18
CTDSPL2-204ENST00000558966 MPNDQ8N594 471 aa7.65□□□□□ -1.18
CTDSPL2-204ENST00000558966 TTLL11Q8NHH1 800 aa7.65□□□□□ -1.18
CTDSPL2-204ENST00000558966 SSH1Q8WYL5 1049 aa7.65□□□□□ -1.18
CTDSPL2-204ENST00000558966 MARVELD3Q96A59 401 aa7.65□□□□□ -1.18
CTDSPL2-204ENST00000558966 SCN4AP35499 1836 aa7.65□□□□□ -1.19
CTDSPL2-204ENST00000558966 PPIP5K2O43314 1243 aa7.64□□□□□ -1.19
CTDSPL2-204ENST00000558966 KDM4AO75164 1064 aa7.64□□□□□ -1.19
CTDSPL2-204ENST00000558966 SLC10A3P09131 477 aa7.64□□□□□ -1.19
CTDSPL2-204ENST00000558966 PPP2R2DQ66LE6 453 aa7.64□□□□□ -1.19
CTDSPL2-204ENST00000558966 PLA2G12BQ9BX93 195 aa7.64□□□□□ -1.19
CTDSPL2-204ENST00000558966 BCL2L13Q9BXK5 485 aa7.64□□□□□ -1.19
CTDSPL2-204ENST00000558966 TMX4Q9H1E5 349 aaPredicted RBP7.64□□□□□ -1.19
CTDSPL2-204ENST00000558966 GREM2Q9H772 168 aa7.64□□□□□ -1.19
CTDSPL2-204ENST00000558966 RABGEF1Q9UJ41 708 aa7.64□□□□□ -1.19
CTDSPL2-204ENST00000558966 RTL9Q8NET4 1388 aa7.64□□□□□ -1.19
CTDSPL2-204ENST00000558966 SPDYE5A6NIY4 337 aa7.64□□□□□ -1.19
CTDSPL2-204ENST00000558966 ST18O60284 1047 aa7.64□□□□□ -1.19
CTDSPL2-204ENST00000558966 GPSM2P81274 684 aa7.64□□□□□ -1.19
CTDSPL2-204ENST00000558966 KIAA2012Q0VF49 1180 aa7.64□□□□□ -1.19
CTDSPL2-204ENST00000558966 C16orf71Q8IYS4 520 aaPredicted RBP7.64□□□□□ -1.19
CTDSPL2-204ENST00000558966 SUPT20HQ8NEM7 779 aa7.64□□□□□ -1.19
CTDSPL2-204ENST00000558966 JDP2Q8WYK2 163 aa7.64□□□□□ -1.19
CTDSPL2-204ENST00000558966 VPS33BQ9H267 617 aa7.64□□□□□ -1.19
CTDSPL2-204ENST00000558966 GCGRP47871 477 aa7.63□□□□□ -1.19
CTDSPL2-204ENST00000558966 EMP3P54852 163 aa7.63□□□□□ -1.19
CTDSPL2-204ENST00000558966 ALDH1L2Q3SY69 923 aa7.63□□□□□ -1.19
CTDSPL2-204ENST00000558966 LHX8Q68G74 356 aa7.63□□□□□ -1.19
CTDSPL2-204ENST00000558966 SLC4A10Q6U841 1118 aa7.63□□□□□ -1.19
CTDSPL2-204ENST00000558966 NIM1KQ8IY84 436 aa7.63□□□□□ -1.19
CTDSPL2-204ENST00000558966 GPC2Q8N158 579 aa7.63□□□□□ -1.19
CTDSPL2-204ENST00000558966 GPR101Q96P66 508 aaPredicted RBP7.63□□□□□ -1.19
CTDSPL2-204ENST00000558966 PODXL2Q9NZ53 605 aa7.63□□□□□ -1.19
CTDSPL2-204ENST00000558966 POLLQ9UGP5 575 aa7.63□□□□□ -1.19
CTDSPL2-204ENST00000558966 NSFL1CQ9UNZ2 370 aaKnown RBP7.63□□□□□ -1.19
CTDSPL2-204ENST00000558966 ADAMTSL1Q8N6G6 1762 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 PTPRCP08575 1304 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 GRM8O00222 908 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 RAD21O60216 631 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 ALDH1L1O75891 902 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 CSF1RP07333 972 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 CT47B1P0C2W7 299 aaPredicted RBP7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 HSPA6P17066 643 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 FOXO4P98177 505 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 TMEM259Q4ZIN3 620 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 ANKRD18AQ8IVF6 992 aa7.62□□□□□ -1.19
CTDSPL2-204ENST00000558966 BANK1Q8NDB2 785 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms