RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 CSRNP1Q96S65 589 aa7.04□□□□□ -1.28
SMAD3-209ENST00000558894 USP44Q9H0E7 712 aa7.04□□□□□ -1.28
SMAD3-209ENST00000558894 RIPOR2Q9Y4F9 1068 aa7.04□□□□□ -1.28
SMAD3-209ENST00000558894 E9PSI1 815 aa7.03□□□□□ -1.28
SMAD3-209ENST00000558894 RFX5P48382 616 aaPredicted RBP7.03□□□□□ -1.28
SMAD3-209ENST00000558894 MMP14P50281 582 aa7.03□□□□□ -1.28
SMAD3-209ENST00000558894 FKBP1AP62942 108 aaKnown RBP7.03□□□□□ -1.28
SMAD3-209ENST00000558894 FKBP1BP68106 108 aa7.03□□□□□ -1.28
SMAD3-209ENST00000558894 SLC4A10Q6U841 1118 aa7.03□□□□□ -1.28
SMAD3-209ENST00000558894 LDHAL6AQ6ZMR3 332 aa7.03□□□□□ -1.28
SMAD3-209ENST00000558894 RASAL3Q86YV0 1011 aa7.03□□□□□ -1.28
SMAD3-209ENST00000558894 C2orf69Q8N8R5 385 aa7.03□□□□□ -1.28
SMAD3-209ENST00000558894 TDRD7Q8NHU6 1098 aaKnown RBP7.03□□□□□ -1.28
SMAD3-209ENST00000558894 ABHD8Q96I13 439 aa7.03□□□□□ -1.28
SMAD3-209ENST00000558894 FAM84BQ96KN1 310 aaPredicted RBP7.03□□□□□ -1.28
SMAD3-209ENST00000558894 PRMT6Q96LA8 375 aaPredicted RBP7.03□□□□□ -1.28
SMAD3-209ENST00000558894 BICC1Q9H694 974 aaKnown RBP7.03□□□□□ -1.28
SMAD3-209ENST00000558894 RNF186Q9NXI6 227 aa7.03□□□□□ -1.28
SMAD3-209ENST00000558894 C9orf78Q9NZ63 289 aaPredicted RBP7.03□□□□□ -1.28
SMAD3-209ENST00000558894 PTPRCP08575 1304 aa7.02□□□□□ -1.28
SMAD3-209ENST00000558894 FAM205AQ6ZU69 1335 aa7.02□□□□□ -1.28
SMAD3-209ENST00000558894 UBE2Q2LH0YL09 131 aa7.02□□□□□ -1.29
SMAD3-209ENST00000558894 CA12O43570 354 aa7.02□□□□□ -1.29
SMAD3-209ENST00000558894 GYG1P46976 350 aa7.02□□□□□ -1.29
SMAD3-209ENST00000558894 ZNF157P51786 506 aaPredicted RBP7.02□□□□□ -1.29
SMAD3-209ENST00000558894 GRIK5Q16478 980 aa7.02□□□□□ -1.29
SMAD3-209ENST00000558894 CCDC57Q2TAC2 916 aa7.02□□□□□ -1.29
SMAD3-209ENST00000558894 LRRC24Q50LG9 513 aa7.02□□□□□ -1.29
SMAD3-209ENST00000558894 LDLRAD1Q5T700 205 aa7.02□□□□□ -1.29
SMAD3-209ENST00000558894 KLHDC4Q8TBB5 520 aa7.02□□□□□ -1.29
SMAD3-209ENST00000558894 CCDC102AQ96A19 550 aa7.02□□□□□ -1.29
SMAD3-209ENST00000558894 SAGE1Q9NXZ1 904 aa7.02□□□□□ -1.29
SMAD3-209ENST00000558894 FZD1Q9UP38 647 aa7.02□□□□□ -1.29
SMAD3-209ENST00000558894 CHMP3Q9Y3E7 222 aa7.02□□□□□ -1.29
SMAD3-209ENST00000558894 COL1A1P02452 1464 aaPredicted RBP7.02□□□□□ -1.29
SMAD3-209ENST00000558894 CCER2I3L3R5 266 aa7.01□□□□□ -1.29
SMAD3-209ENST00000558894 UBE4AQ14139 1066 aa7.01□□□□□ -1.29
SMAD3-209ENST00000558894 ALDH1L2Q3SY69 923 aa7.01□□□□□ -1.29
SMAD3-209ENST00000558894 FBXO33Q7Z6M2 555 aa7.01□□□□□ -1.29
SMAD3-209ENST00000558894 OGFOD1Q8N543 542 aa7.01□□□□□ -1.29
SMAD3-209ENST00000558894 FBXW7Q969H0 707 aa7.01□□□□□ -1.29
SMAD3-209ENST00000558894 CNNM1Q9NRU3 951 aa7.01□□□□□ -1.29
SMAD3-209ENST00000558894 JAG2Q9Y219 1238 aa7.01□□□□□ -1.29
SMAD3-209ENST00000558894 SPDYE2BA6NHP3 402 aa7□□□□□ -1.29
SMAD3-209ENST00000558894 PLIN1O60240 522 aa7□□□□□ -1.29
SMAD3-209ENST00000558894 PDE8BO95263 885 aa7□□□□□ -1.29
SMAD3-209ENST00000558894 SPDYE6P0CI01 402 aa7□□□□□ -1.29
SMAD3-209ENST00000558894 FGFR2P21802 821 aa7□□□□□ -1.29
SMAD3-209ENST00000558894 KCNJ4P48050 445 aa7□□□□□ -1.29
SMAD3-209ENST00000558894 TM4SF4P48230 202 aa7□□□□□ -1.29
SMAD3-209ENST00000558894 PTPN12Q05209 780 aaKnown RBP7□□□□□ -1.29
SMAD3-209ENST00000558894 MAP3K11Q16584 847 aa7□□□□□ -1.29
SMAD3-209ENST00000558894 CFAP100Q494V2 611 aa7□□□□□ -1.29
SMAD3-209ENST00000558894 ATG9AQ7Z3C6 839 aa7□□□□□ -1.29
SMAD3-209ENST00000558894 ZNF804AQ7Z570 1209 aa7□□□□□ -1.29
SMAD3-209ENST00000558894 CDAN1Q8IWY9 1227 aa7□□□□□ -1.29
SMAD3-209ENST00000558894 TEPSINQ96N21 525 aa7□□□□□ -1.29
SMAD3-209ENST00000558894 BEGAINQ9BUH8 593 aa7□□□□□ -1.29
SMAD3-209ENST00000558894 MCOLN1Q9GZU1 580 aa7□□□□□ -1.29
SMAD3-209ENST00000558894 DEFB129Q9H1M3 183 aa7□□□□□ -1.29
SMAD3-209ENST00000558894 MROH5Q6ZUA9 1318 aa7□□□□□ -1.29
SMAD3-209ENST00000558894 MYH2Q9UKX2 1941 aa6.99□□□□□ -1.29
SMAD3-209ENST00000558894 MYO5AQ9Y4I1 1855 aaKnown RBP6.99□□□□□ -1.29
SMAD3-209ENST00000558894 F8W031 263 aaPredicted RBP6.99□□□□□ -1.29
SMAD3-209ENST00000558894 TRPA1O75762 1119 aa6.99□□□□□ -1.29
SMAD3-209ENST00000558894 HIBADHP31937 336 aaKnown RBP6.99□□□□□ -1.29
SMAD3-209ENST00000558894 DLGAP5Q15398 846 aa6.99□□□□□ -1.29
SMAD3-209ENST00000558894 NBPF12Q5TAG4 269 aaPredicted RBP6.99□□□□□ -1.29
SMAD3-209ENST00000558894 APOBEC3FQ8IUX4 373 aaKnown RBP6.99□□□□□ -1.29
SMAD3-209ENST00000558894 REM2Q8IYK8 340 aaPredicted RBP6.99□□□□□ -1.29
SMAD3-209ENST00000558894 R3HDMLQ9H3Y0 253 aa6.99□□□□□ -1.29
SMAD3-209ENST00000558894 HDAC9Q9UKV0 1011 aa6.99□□□□□ -1.29
SMAD3-209ENST00000558894 RBBP6Q7Z6E9 1792 aaKnown RBP6.99□□□□□ -1.29
SMAD3-209ENST00000558894 HTTP42858 3142 aa6.99□□□□□ -1.29
SMAD3-209ENST00000558894 KIF16BQ96L93 1317 aa6.99□□□□□ -1.29
SMAD3-209ENST00000558894 CDK5RAP2Q96SN8 1893 aa6.98□□□□□ -1.29
SMAD3-209ENST00000558894 CLRN2A0PK11 232 aa6.98□□□□□ -1.29
SMAD3-209ENST00000558894 EYA2O00167 538 aa6.98□□□□□ -1.29
SMAD3-209ENST00000558894 USP2O75604 605 aaPredicted RBP6.98□□□□□ -1.29
SMAD3-209ENST00000558894 CT47B1P0C2W7 299 aaPredicted RBP6.98□□□□□ -1.29
SMAD3-209ENST00000558894 SPDYE2Q495Y8 402 aa6.98□□□□□ -1.29
SMAD3-209ENST00000558894 TAF7LQ5H9L4 462 aa6.98□□□□□ -1.29
SMAD3-209ENST00000558894 MFSD14BQ5SR56 506 aa6.98□□□□□ -1.29
SMAD3-209ENST00000558894 CLMNQ96JQ2 1002 aa6.98□□□□□ -1.29
SMAD3-209ENST00000558894 CFHR5Q9BXR6 569 aa6.98□□□□□ -1.29
SMAD3-209ENST00000558894 SERPINA10Q9UK55 444 aa6.98□□□□□ -1.29
SMAD3-209ENST00000558894 NOB1Q9ULX3 412 aaKnown RBP6.98□□□□□ -1.29
SMAD3-209ENST00000558894 IQSEC3Q9UPP2 1182 aaPredicted RBP6.98□□□□□ -1.29
SMAD3-209ENST00000558894 PPP2R3BQ9Y5P8 575 aa6.98□□□□□ -1.29
SMAD3-209ENST00000558894 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.98□□□□□ -1.29
SMAD3-209ENST00000558894 ZSWIM8A7E2V4 1837 aa6.98□□□□□ -1.29
SMAD3-209ENST00000558894 PHIPQ8WWQ0 1821 aa6.98□□□□□ -1.29
SMAD3-209ENST00000558894 DOCK2Q92608 1830 aa6.98□□□□□ -1.29
SMAD3-209ENST00000558894 BRCA2P51587 3418 aa6.97□□□□□ -1.29
SMAD3-209ENST00000558894 ZBTB22O15209 634 aa6.97□□□□□ -1.29
SMAD3-209ENST00000558894 GJA5P36382 358 aa6.97□□□□□ -1.29
SMAD3-209ENST00000558894 CRKP46108 304 aa6.97□□□□□ -1.29
SMAD3-209ENST00000558894 CENPFP49454 3210 aa6.97□□□□□ -1.29
SMAD3-209ENST00000558894 BCAMP50895 628 aa6.97□□□□□ -1.29
SMAD3-209ENST00000558894 RARSP54136 660 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms