RNA–Protein interactions for RNA: ENST00000558863.5

ZEB1-214, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 5

Gene ZEB1, Length 1,355 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-214ENST00000558863 DACT2Q5SW24 774 aa29.9■■■□□ 2.38
ZEB1-214ENST00000558863 AGBL3Q8NEM8 1001 aa29.9■■■□□ 2.38
ZEB1-214ENST00000558863 TBC1D22AQ8WUA7 517 aa29.9■■■□□ 2.38
ZEB1-214ENST00000558863 PDS5AQ29RF7 1337 aaKnown RBP29.89■■■□□ 2.38
ZEB1-214ENST00000558863 WDR90Q96KV7 1748 aa29.89■■■□□ 2.38
ZEB1-214ENST00000558863 ARID4AP29374 1257 aaPredicted RBP29.89■■■□□ 2.37
ZEB1-214ENST00000558863 TTC39AQ5SRH9 613 aa29.89■■■□□ 2.37
ZEB1-214ENST00000558863 DPF2Q92785 391 aa29.89■■■□□ 2.37
ZEB1-214ENST00000558863 MMP14P50281 582 aa29.88■■■□□ 2.37
ZEB1-214ENST00000558863 ANKRD45Q5TZF3 282 aa29.88■■■□□ 2.37
ZEB1-214ENST00000558863 WDR66Q8TBY9 1149 aa29.88■■■□□ 2.37
ZEB1-214ENST00000558863 IQSEC3Q9UPP2 1182 aaPredicted RBP29.88■■■□□ 2.37
ZEB1-214ENST00000558863 IQCA1LA6NCM1 817 aa29.87■■■□□ 2.37
ZEB1-214ENST00000558863 LMOD1P29536 600 aaPredicted RBP29.87■■■□□ 2.37
ZEB1-214ENST00000558863 MYH13Q9UKX3 1938 aa29.87■■■□□ 2.37
ZEB1-214ENST00000558863 SMARCA5O60264 1052 aaPredicted RBP29.86■■■□□ 2.37
ZEB1-214ENST00000558863 TLR7Q9NYK1 1049 aaKnown RBP29.86■■■□□ 2.37
ZEB1-214ENST00000558863 GMPSP49915 693 aaPredicted RBP29.85■■■□□ 2.37
ZEB1-214ENST00000558863 GPATCH3Q96I76 525 aa29.85■■■□□ 2.37
ZEB1-214ENST00000558863 GPBP1L1Q9HC44 474 aaPredicted RBP29.85■■■□□ 2.37
ZEB1-214ENST00000558863 ZNF646O15015 1829 aaPredicted RBP29.85■■■□□ 2.37
ZEB1-214ENST00000558863 CHAF1AQ13111 956 aaPredicted RBP29.84■■■□□ 2.37
ZEB1-214ENST00000558863 RASGRF1Q13972 1273 aa29.84■■■□□ 2.37
ZEB1-214ENST00000558863 MFSD14BQ5SR56 506 aa29.84■■■□□ 2.37
ZEB1-214ENST00000558863 GMLQ99445 158 aa29.84■■■□□ 2.37
ZEB1-214ENST00000558863 GPRC5DQ9NZD1 345 aa29.84■■■□□ 2.37
ZEB1-214ENST00000558863 SCN4AP35499 1836 aa29.83■■■□□ 2.37
ZEB1-214ENST00000558863 VEGFAP15692 232 aaPredicted RBP29.83■■■□□ 2.37
ZEB1-214ENST00000558863 SCNN1DP51172 638 aa29.83■■■□□ 2.37
ZEB1-214ENST00000558863 ZGPATQ8N5A5 531 aaKnown RBP29.83■■■□□ 2.37
ZEB1-214ENST00000558863 HACL1Q9UJ83 578 aa29.83■■■□□ 2.37
ZEB1-214ENST00000558863 SUGT1Q9Y2Z0 365 aa29.83■■■□□ 2.37
ZEB1-214ENST00000558863 ZBTB12Q9Y330 459 aaPredicted RBP29.83■■■□□ 2.37
ZEB1-214ENST00000558863 ZNF526Q8TF50 670 aaPredicted RBP29.82■■■□□ 2.36
ZEB1-214ENST00000558863 BCL11AQ9H165 835 aa29.82■■■□□ 2.36
ZEB1-214ENST00000558863 SALL1Q9NSC2 1324 aa29.82■■■□□ 2.36
ZEB1-214ENST00000558863 NUCB1Q02818 461 aa29.81■■■□□ 2.36
ZEB1-214ENST00000558863 SPATA5Q8NB90 893 aa29.81■■■□□ 2.36
ZEB1-214ENST00000558863 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.81■■■□□ 2.36
ZEB1-214ENST00000558863 H7C1D1 291 aa29.8■■■□□ 2.36
ZEB1-214ENST00000558863 OGFOD1Q8N543 542 aa29.8■■■□□ 2.36
ZEB1-214ENST00000558863 ZNF784Q8NCA9 323 aaPredicted RBP29.8■■■□□ 2.36
ZEB1-214ENST00000558863 HMG20BQ9P0W2 317 aa29.8■■■□□ 2.36
ZEB1-214ENST00000558863 CNOT7Q9UIV1 285 aaKnown RBP29.8■■■□□ 2.36
ZEB1-214ENST00000558863 COL1A1P02452 1464 aaPredicted RBP29.8■■■□□ 2.36
ZEB1-214ENST00000558863 USP17L8P0C7I0 530 aa29.79■■■□□ 2.36
ZEB1-214ENST00000558863 MCAMP43121 646 aa29.79■■■□□ 2.36
ZEB1-214ENST00000558863 CHD1LQ86WJ1 897 aa29.79■■■□□ 2.36
ZEB1-214ENST00000558863 HDAC9Q9UKV0 1011 aa29.79■■■□□ 2.36
ZEB1-214ENST00000558863 JAG2Q9Y219 1238 aa29.79■■■□□ 2.36
ZEB1-214ENST00000558863 B4GALNT3Q6L9W6 998 aa29.78■■■□□ 2.36
ZEB1-214ENST00000558863 CENPQQ7L2Z9 268 aaPredicted RBP29.78■■■□□ 2.36
ZEB1-214ENST00000558863 MICALL2Q8IY33 904 aa29.78■■■□□ 2.36
ZEB1-214ENST00000558863 CERS5Q8N5B7 392 aa29.78■■■□□ 2.36
ZEB1-214ENST00000558863 CCDC136Q96JN2 1154 aa29.78■■■□□ 2.36
ZEB1-214ENST00000558863 RRAGCQ9HB90 399 aa29.78■■■□□ 2.36
ZEB1-214ENST00000558863 ATP5JP18859 108 aa29.77■■■□□ 2.36
ZEB1-214ENST00000558863 SPTY2D1Q68D10 685 aaPredicted RBP29.77■■■□□ 2.36
ZEB1-214ENST00000558863 MXD3Q9BW11 206 aa29.77■■■□□ 2.36
ZEB1-214ENST00000558863 ECHDC1Q9NTX5 307 aa29.77■■■□□ 2.36
ZEB1-214ENST00000558863 MAST3O60307 1309 aa29.77■■■□□ 2.36
ZEB1-214ENST00000558863 TTC41PQ6P2S7 1318 aa29.77■■■□□ 2.36
ZEB1-214ENST00000558863 POTECB2RU33 542 aa29.77■■■□□ 2.36
ZEB1-214ENST00000558863 IGSF3O75054 1194 aa29.77■■■□□ 2.36
ZEB1-214ENST00000558863 ZNF280AP59817 542 aaPredicted RBP29.77■■■□□ 2.36
ZEB1-214ENST00000558863 SCARF1Q14162 830 aa29.77■■■□□ 2.36
ZEB1-214ENST00000558863 NMRK2Q9NPI5 230 aa29.77■■■□□ 2.36
ZEB1-214ENST00000558863 ADARB2Q9NS39 739 aaKnown RBP29.77■■■□□ 2.36
ZEB1-214ENST00000558863 EPHX2P34913 555 aa29.76■■■□□ 2.35
ZEB1-214ENST00000558863 PNMA8AQ86V59 439 aaPredicted RBP29.76■■■□□ 2.35
ZEB1-214ENST00000558863 KIAA0825Q8IV33 1275 aa29.76■■■□□ 2.35
ZEB1-214ENST00000558863 LNPKQ9C0E8 428 aa29.76■■■□□ 2.35
ZEB1-214ENST00000558863 EPS15P42566 896 aa29.75■■■□□ 2.35
ZEB1-214ENST00000558863 TAF1DQ9H5J8 278 aaPredicted RBP29.75■■■□□ 2.35
ZEB1-214ENST00000558863 PPP4R2Q9NY27 417 aa29.75■■■□□ 2.35
ZEB1-214ENST00000558863 AKAP11Q9UKA4 1901 aa29.74■■■□□ 2.35
ZEB1-214ENST00000558863 ERC2O15083 957 aa29.74■■■□□ 2.35
ZEB1-214ENST00000558863 LDHBP07195 334 aaKnown RBP29.74■■■□□ 2.35
ZEB1-214ENST00000558863 USP50Q70EL3 339 aaPredicted RBP29.74■■■□□ 2.35
ZEB1-214ENST00000558863 MX1P20591 662 aa29.73■■■□□ 2.35
ZEB1-214ENST00000558863 HDLBPQ00341 1268 aaKnown RBP29.72■■■□□ 2.35
ZEB1-214ENST00000558863 PI16Q6UXB8 463 aa29.72■■■□□ 2.35
ZEB1-214ENST00000558863 C16orf71Q8IYS4 520 aaPredicted RBP29.72■■■□□ 2.35
ZEB1-214ENST00000558863 MRIQ9BWK5 157 aa29.72■■■□□ 2.35
ZEB1-214ENST00000558863 ABCF2Q9UG63 623 aa29.72■■■□□ 2.35
ZEB1-214ENST00000558863 TTF2Q9UNY4 1162 aaKnown RBP29.72■■■□□ 2.35
ZEB1-214ENST00000558863 SALL3Q9BXA9 1300 aa29.71■■■□□ 2.35
ZEB1-214ENST00000558863 ZAP70P43403 619 aa29.71■■■□□ 2.35
ZEB1-214ENST00000558863 TTF1Q15361 905 aaPredicted RBP29.71■■■□□ 2.35
ZEB1-214ENST00000558863 MYOZ2Q9NPC6 264 aa29.71■■■□□ 2.35
ZEB1-214ENST00000558863 SNRKQ9NRH2 765 aa29.71■■■□□ 2.35
ZEB1-214ENST00000558863 SERPINA10Q9UK55 444 aa29.71■■■□□ 2.35
ZEB1-214ENST00000558863 ERICH6Q7L0X2 663 aa29.7■■■□□ 2.35
ZEB1-214ENST00000558863 STAP2Q9UGK3 403 aa29.7■■■□□ 2.35
ZEB1-214ENST00000558863 F8W031 263 aaPredicted RBP29.69■■■□□ 2.34
ZEB1-214ENST00000558863 GLRX3O76003 335 aaKnown RBP29.69■■■□□ 2.34
ZEB1-214ENST00000558863 CYP2E1P05181 493 aaPredicted RBP29.69■■■□□ 2.34
ZEB1-214ENST00000558863 SLF2Q8IX21 1173 aa29.69■■■□□ 2.34
ZEB1-214ENST00000558863 MTMR14Q8NCE2 650 aa29.69■■■□□ 2.34
ZEB1-214ENST00000558863 HAUS7Q99871 368 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms