RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 GLYCTKQ8IVS8 523 aa6.19□□□□□ -1.42
SPG11-211ENST00000558561 RGL4Q8IZJ4 473 aa6.19□□□□□ -1.42
SPG11-211ENST00000558561 ABTB2Q8N961 1025 aa6.19□□□□□ -1.42
SPG11-211ENST00000558561 GPR152Q8TDT2 470 aa6.19□□□□□ -1.42
SPG11-211ENST00000558561 DCAF11Q8TEB1 546 aa6.19□□□□□ -1.42
SPG11-211ENST00000558561 CNTNAP3BQ96NU0 1288 aa6.19□□□□□ -1.42
SPG11-211ENST00000558561 CNTNAP3Q9BZ76 1288 aa6.19□□□□□ -1.42
SPG11-211ENST00000558561 MARK1Q9P0L2 795 aa6.19□□□□□ -1.42
SPG11-211ENST00000558561 KCNH4Q9UQ05 1017 aa6.19□□□□□ -1.42
SPG11-211ENST00000558561 RTCBQ9Y3I0 505 aaKnown RBP6.19□□□□□ -1.42
SPG11-211ENST00000558561 CPS1P31327 1500 aa6.19□□□□□ -1.42
SPG11-211ENST00000558561 DHX57Q6P158 1386 aaKnown RBP6.18□□□□□ -1.42
SPG11-211ENST00000558561 PLEKHH1Q9ULM0 1364 aa6.18□□□□□ -1.42
SPG11-211ENST00000558561 PPLO60437 1756 aa6.18□□□□□ -1.42
SPG11-211ENST00000558561 KCNQ4P56696 695 aa6.18□□□□□ -1.42
SPG11-211ENST00000558561 ARHGAP4P98171 946 aa6.18□□□□□ -1.42
SPG11-211ENST00000558561 AAMPQ13685 434 aa6.18□□□□□ -1.42
SPG11-211ENST00000558561 LAMC2Q13753 1193 aa6.18□□□□□ -1.42
SPG11-211ENST00000558561 CMTR1Q8N1G2 835 aaKnown RBP6.18□□□□□ -1.42
SPG11-211ENST00000558561 SLC30A3Q99726 388 aa6.18□□□□□ -1.42
SPG11-211ENST00000558561 RPGRIP1LQ68CZ1 1315 aa6.18□□□□□ -1.42
SPG11-211ENST00000558561 ROBO2Q9HCK4 1378 aa6.18□□□□□ -1.42
SPG11-211ENST00000558561 SETD1AO15047 1707 aaKnown RBP6.17□□□□□ -1.42
SPG11-211ENST00000558561 PATL2C9JE40 543 aaKnown RBP6.17□□□□□ -1.42
SPG11-211ENST00000558561 BMP4P12644 408 aa6.17□□□□□ -1.42
SPG11-211ENST00000558561 DNM1Q05193 864 aaKnown RBP6.17□□□□□ -1.42
SPG11-211ENST00000558561 TRIM26Q12899 539 aaPredicted RBP6.17□□□□□ -1.42
SPG11-211ENST00000558561 SAFB2Q14151 953 aaKnown RBP eCLIP6.17□□□□□ -1.42
SPG11-211ENST00000558561 ORAI2Q96SN7 254 aa6.17□□□□□ -1.42
SPG11-211ENST00000558561 C14orf93Q9H972 538 aaKnown RBP6.17□□□□□ -1.42
SPG11-211ENST00000558561 CCDC87Q9NVE4 849 aa6.17□□□□□ -1.42
SPG11-211ENST00000558561 CCDC144AA2RUR9 1427 aa6.16□□□□□ -1.42
SPG11-211ENST00000558561 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.16□□□□□ -1.42
SPG11-211ENST00000558561 FZD6O60353 706 aa6.16□□□□□ -1.42
SPG11-211ENST00000558561 SPEM2Q0P670 501 aa6.16□□□□□ -1.42
SPG11-211ENST00000558561 ALKBH2Q6NS38 261 aa6.16□□□□□ -1.42
SPG11-211ENST00000558561 RAB44Q7Z6P3 723 aaPredicted RBP6.16□□□□□ -1.42
SPG11-211ENST00000558561 PIK3R5Q8WYR1 880 aa6.16□□□□□ -1.42
SPG11-211ENST00000558561 EDEM1Q92611 657 aa6.16□□□□□ -1.42
SPG11-211ENST00000558561 PCGF6Q9BYE7 350 aa6.16□□□□□ -1.42
SPG11-211ENST00000558561 GZF1Q9H116 711 aaPredicted RBP6.16□□□□□ -1.42
SPG11-211ENST00000558561 C19orf44Q9H6X5 657 aa6.16□□□□□ -1.42
SPG11-211ENST00000558561 MBIPQ9NS73 344 aa6.16□□□□□ -1.42
SPG11-211ENST00000558561 BIN2Q9UBW5 565 aaPredicted RBP6.16□□□□□ -1.42
SPG11-211ENST00000558561 RGS17Q9UGC6 210 aaPredicted RBP6.16□□□□□ -1.42
SPG11-211ENST00000558561 KCNMB2Q9Y691 235 aa6.16□□□□□ -1.42
SPG11-211ENST00000558561 IQSEC2Q5JU85 1478 aa6.15□□□□□ -1.42
SPG11-211ENST00000558561 ASXL1Q8IXJ9 1541 aa6.15□□□□□ -1.42
SPG11-211ENST00000558561 NWD1Q149M9 1564 aa6.15□□□□□ -1.42
SPG11-211ENST00000558561 EPB42P16452 691 aa6.15□□□□□ -1.42
SPG11-211ENST00000558561 TRIP4Q15650 581 aaPredicted RBP6.15□□□□□ -1.42
SPG11-211ENST00000558561 NBPF8Q3BBV2 869 aa6.15□□□□□ -1.42
SPG11-211ENST00000558561 FAM182BQ5T319 152 aa6.15□□□□□ -1.42
SPG11-211ENST00000558561 NUDT16Q96DE0 195 aaKnown RBP6.15□□□□□ -1.42
SPG11-211ENST00000558561 GSX2Q9BZM3 304 aa6.15□□□□□ -1.42
SPG11-211ENST00000558561 GGNBP2Q9H3C7 697 aa6.15□□□□□ -1.42
SPG11-211ENST00000558561 PRR12Q9ULL5 1215 aa6.15□□□□□ -1.42
SPG11-211ENST00000558561 POLIQ9UNA4 740 aa6.15□□□□□ -1.42
SPG11-211ENST00000558561 TRAK1Q9UPV9 953 aa6.15□□□□□ -1.42
SPG11-211ENST00000558561 IFT172Q9UG01 1749 aa6.15□□□□□ -1.42
SPG11-211ENST00000558561 SETBP1Q9Y6X0 1596 aa6.14□□□□□ -1.43
SPG11-211ENST00000558561 XYLBO75191 536 aa6.14□□□□□ -1.43
SPG11-211ENST00000558561 SASH3O75995 380 aa6.14□□□□□ -1.43
SPG11-211ENST00000558561 ADAMTS2O95450 1211 aa6.14□□□□□ -1.43
SPG11-211ENST00000558561 PDGFAP04085 211 aa6.14□□□□□ -1.43
SPG11-211ENST00000558561 ATF3P18847 181 aa6.14□□□□□ -1.43
SPG11-211ENST00000558561 TARSP26639 723 aaKnown RBP6.14□□□□□ -1.43
SPG11-211ENST00000558561 MZF1P28698 734 aaPredicted RBP6.14□□□□□ -1.43
SPG11-211ENST00000558561 PCBP4P57723 403 aaKnown RBP6.14□□□□□ -1.43
SPG11-211ENST00000558561 XPCQ01831 940 aaPredicted RBP6.14□□□□□ -1.43
SPG11-211ENST00000558561 SRSF11Q05519 484 aaKnown RBP6.14□□□□□ -1.43
SPG11-211ENST00000558561 CCINQ13939 588 aa6.14□□□□□ -1.43
SPG11-211ENST00000558561 BRINP3Q76B58 766 aa6.14□□□□□ -1.43
SPG11-211ENST00000558561 KRT25Q7Z3Z0 450 aa6.14□□□□□ -1.43
SPG11-211ENST00000558561 HIRIP3Q9BW71 556 aaPredicted RBP6.14□□□□□ -1.43
SPG11-211ENST00000558561 FAM13BQ9NYF5 915 aa6.14□□□□□ -1.43
SPG11-211ENST00000558561 KLF15Q9UIH9 416 aa6.14□□□□□ -1.43
SPG11-211ENST00000558561 DISP3Q9P2K9 1392 aa6.14□□□□□ -1.43
SPG11-211ENST00000558561 XRN1Q8IZH2 1706 aaKnown RBP6.13□□□□□ -1.43
SPG11-211ENST00000558561 ZBTB7CA1YPR0 619 aa6.13□□□□□ -1.43
SPG11-211ENST00000558561 A6NHS1 94 aa6.13□□□□□ -1.43
SPG11-211ENST00000558561 BHMTQ93088 406 aa6.13□□□□□ -1.43
SPG11-211ENST00000558561 NSFL1CQ9UNZ2 370 aaKnown RBP6.13□□□□□ -1.43
SPG11-211ENST00000558561 MSH6P52701 1360 aa6.13□□□□□ -1.43
SPG11-211ENST00000558561 PIK3R4Q99570 1358 aa6.13□□□□□ -1.43
SPG11-211ENST00000558561 FAM135BQ49AJ0 1406 aa6.13□□□□□ -1.43
SPG11-211ENST00000558561 ROBO1Q9Y6N7 1651 aa6.13□□□□□ -1.43
SPG11-211ENST00000558561 RGPD8O14715 1765 aaPredicted RBP6.13□□□□□ -1.43
SPG11-211ENST00000558561 PIK3C2GO75747 1445 aa6.12□□□□□ -1.43
SPG11-211ENST00000558561 EGFRP00533 1210 aa6.12□□□□□ -1.43
SPG11-211ENST00000558561 LRPPRCP42704 1394 aaKnown RBP6.12□□□□□ -1.43
SPG11-211ENST00000558561 MAP2K3P46734 347 aa6.12□□□□□ -1.43
SPG11-211ENST00000558561 C8orf34Q49A92 452 aa6.12□□□□□ -1.43
SPG11-211ENST00000558561 ZNF468Q5VIY5 522 aaPredicted RBP6.12□□□□□ -1.43
SPG11-211ENST00000558561 SYT9Q86SS6 491 aa6.12□□□□□ -1.43
SPG11-211ENST00000558561 WHAMMQ8TF30 809 aa6.12□□□□□ -1.43
SPG11-211ENST00000558561 ACDQ96AP0 544 aa6.12□□□□□ -1.43
SPG11-211ENST00000558561 PRAM1Q96QH2 718 aa6.12□□□□□ -1.43
SPG11-211ENST00000558561 ZFATQ9P243 1243 aa6.12□□□□□ -1.43
SPG11-211ENST00000558561 BRPF3Q9ULD4 1205 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms