RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 MICALL2Q8IY33 904 aa20.61■□□□□ 0.89
PBX4-202ENST00000557978 RHPN1Q8TCX5 695 aa20.61■□□□□ 0.89
PBX4-202ENST00000557978 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.61■□□□□ 0.89
PBX4-202ENST00000557978 FPGT-TNNI3KV9GXZ4 949 aa20.61■□□□□ 0.89
PBX4-202ENST00000557978 ECM29Q5VYK3 1845 aa20.6■□□□□ 0.89
PBX4-202ENST00000557978 SEMA3EO15041 775 aa20.6■□□□□ 0.89
PBX4-202ENST00000557978 CCDC102BQ68D86 513 aa20.6■□□□□ 0.89
PBX4-202ENST00000557978 OGFOD1Q8N543 542 aa20.6■□□□□ 0.89
PBX4-202ENST00000557978 EXOC6Q8TAG9 804 aa20.6■□□□□ 0.89
PBX4-202ENST00000557978 TBC1D22AQ8WUA7 517 aa20.6■□□□□ 0.89
PBX4-202ENST00000557978 GMLQ99445 158 aa20.6■□□□□ 0.89
PBX4-202ENST00000557978 IQSEC3Q9UPP2 1182 aaPredicted RBP20.6■□□□□ 0.89
PBX4-202ENST00000557978 AKAP11Q9UKA4 1901 aa20.59■□□□□ 0.89
PBX4-202ENST00000557978 ADAMTSL1Q8N6G6 1762 aa20.59■□□□□ 0.89
PBX4-202ENST00000557978 ZBTB22O15209 634 aa20.59■□□□□ 0.89
PBX4-202ENST00000557978 USP17L8P0C7I0 530 aa20.59■□□□□ 0.89
PBX4-202ENST00000557978 ADORA1P30542 326 aa20.59■□□□□ 0.89
PBX4-202ENST00000557978 EAPPQ56P03 285 aaPredicted RBP20.59■□□□□ 0.89
PBX4-202ENST00000557978 RBM46Q8TBY0 533 aaKnown RBP20.59■□□□□ 0.89
PBX4-202ENST00000557978 PHKA1P46020 1223 aa20.58■□□□□ 0.88
PBX4-202ENST00000557978 CLASRPQ8N2M8 674 aaKnown RBP20.58■□□□□ 0.88
PBX4-202ENST00000557978 DCTPP1Q9H773 170 aa20.58■□□□□ 0.88
PBX4-202ENST00000557978 HDAC9Q9UKV0 1011 aa20.58■□□□□ 0.88
PBX4-202ENST00000557978 DENND2AQ9ULE3 1009 aa20.58■□□□□ 0.88
PBX4-202ENST00000557978 APBB1O00213 710 aa20.57■□□□□ 0.88
PBX4-202ENST00000557978 CENPBP07199 599 aaPredicted RBP20.57■□□□□ 0.88
PBX4-202ENST00000557978 CHAF1AQ13111 956 aaPredicted RBP20.57■□□□□ 0.88
PBX4-202ENST00000557978 CCDC158Q5M9N0 1113 aa20.57■□□□□ 0.88
PBX4-202ENST00000557978 MFSD14BQ5SR56 506 aa20.57■□□□□ 0.88
PBX4-202ENST00000557978 LDHDQ86WU2 507 aa20.57■□□□□ 0.88
PBX4-202ENST00000557978 MXD3Q9BW11 206 aa20.57■□□□□ 0.88
PBX4-202ENST00000557978 CLEC11AQ9Y240 323 aa20.57■□□□□ 0.88
PBX4-202ENST00000557978 ZNF280AP59817 542 aaPredicted RBP20.56■□□□□ 0.88
PBX4-202ENST00000557978 WDR66Q8TBY9 1149 aa20.56■□□□□ 0.88
PBX4-202ENST00000557978 JAG2Q9Y219 1238 aa20.56■□□□□ 0.88
PBX4-202ENST00000557978 UQCRFS1P1P0C7P4 283 aa20.55■□□□□ 0.88
PBX4-202ENST00000557978 KIAA0825Q8IV33 1275 aa20.55■□□□□ 0.88
PBX4-202ENST00000557978 SMC1BQ8NDV3 1235 aa20.55■□□□□ 0.88
PBX4-202ENST00000557978 EAF2Q96CJ1 260 aaPredicted RBP20.55■□□□□ 0.88
PBX4-202ENST00000557978 LRRCC1Q9C099 1032 aa20.55■□□□□ 0.88
PBX4-202ENST00000557978 IL1RAPL2Q9NP60 686 aa20.55■□□□□ 0.88
PBX4-202ENST00000557978 MYH2Q9UKX2 1941 aa20.55■□□□□ 0.88
PBX4-202ENST00000557978 HDAC1Q13547 482 aaPredicted RBP20.54■□□□□ 0.88
PBX4-202ENST00000557978 SAMD7Q7Z3H4 446 aa20.54■□□□□ 0.88
PBX4-202ENST00000557978 AACSQ86V21 672 aa20.54■□□□□ 0.88
PBX4-202ENST00000557978 CERS5Q8N5B7 392 aa20.54■□□□□ 0.88
PBX4-202ENST00000557978 ZC3H15Q8WU90 426 aaKnown RBP20.54■□□□□ 0.88
PBX4-202ENST00000557978 DBNDD2Q9BQY9 259 aa20.54■□□□□ 0.88
PBX4-202ENST00000557978 CCDC8Q9H0W5 538 aaPredicted RBP20.54■□□□□ 0.88
PBX4-202ENST00000557978 MYO5AQ9Y4I1 1855 aaKnown RBP20.54■□□□□ 0.88
PBX4-202ENST00000557978 SHTN1A0MZ66 631 aa20.53■□□□□ 0.88
PBX4-202ENST00000557978 ARID4AP29374 1257 aaPredicted RBP20.53■□□□□ 0.88
PBX4-202ENST00000557978 IRX6P78412 446 aaPredicted RBP20.53■□□□□ 0.88
PBX4-202ENST00000557978 FSTL1Q12841 308 aa20.53■□□□□ 0.88
PBX4-202ENST00000557978 PDS5AQ29RF7 1337 aaKnown RBP20.53■□□□□ 0.88
PBX4-202ENST00000557978 TBC1D10BQ4KMP7 808 aaPredicted RBP20.53■□□□□ 0.88
PBX4-202ENST00000557978 TTC39AQ5SRH9 613 aa20.53■□□□□ 0.88
PBX4-202ENST00000557978 CHADLQ6NUI6 762 aa20.53■□□□□ 0.88
PBX4-202ENST00000557978 ZGPATQ8N5A5 531 aaKnown RBP20.53■□□□□ 0.88
PBX4-202ENST00000557978 TRPM7Q96QT4 1865 aa20.53■□□□□ 0.88
PBX4-202ENST00000557978 MYOZ2Q9NPC6 264 aa20.53■□□□□ 0.88
PBX4-202ENST00000557978 SUGT1Q9Y2Z0 365 aa20.53■□□□□ 0.88
PBX4-202ENST00000557978 IFIT2P09913 472 aaKnown RBP20.53■□□□□ 0.88
PBX4-202ENST00000557978 POTEIP0CG38 1075 aa20.53■□□□□ 0.88
PBX4-202ENST00000557978 POTEJP0CG39 1038 aa20.53■□□□□ 0.88
PBX4-202ENST00000557978 KIF4BQ2VIQ3 1234 aa20.53■□□□□ 0.88
PBX4-202ENST00000557978 RBM26Q5T8P6 1007 aaKnown RBP20.53■□□□□ 0.88
PBX4-202ENST00000557978 RWDD1Q9H446 243 aaPredicted RBP20.53■□□□□ 0.88
PBX4-202ENST00000557978 DBNLQ9UJU6 430 aaKnown RBP20.53■□□□□ 0.88
PBX4-202ENST00000557978 SALL1Q9NSC2 1324 aa20.52■□□□□ 0.87
PBX4-202ENST00000557978 RASGRF1Q13972 1273 aa20.52■□□□□ 0.87
PBX4-202ENST00000557978 TRPM4Q8TD43 1214 aa20.52■□□□□ 0.87
PBX4-202ENST00000557978 GCC1Q96CN9 775 aa20.52■□□□□ 0.87
PBX4-202ENST00000557978 ZNF512BQ96KM6 892 aaPredicted RBP20.52■□□□□ 0.87
PBX4-202ENST00000557978 MAST3O60307 1309 aa20.51■□□□□ 0.87
PBX4-202ENST00000557978 F8W031 263 aaPredicted RBP20.51■□□□□ 0.87
PBX4-202ENST00000557978 HIRAP54198 1017 aaPredicted RBP20.51■□□□□ 0.87
PBX4-202ENST00000557978 TTF2Q9UNY4 1162 aaKnown RBP20.51■□□□□ 0.87
PBX4-202ENST00000557978 COL1A1P02452 1464 aaPredicted RBP20.5■□□□□ 0.87
PBX4-202ENST00000557978 C1QTNF8P60827 252 aa20.5■□□□□ 0.87
PBX4-202ENST00000557978 SPATA5Q8NB90 893 aa20.5■□□□□ 0.87
PBX4-202ENST00000557978 ZBTB47Q9UFB7 747 aaPredicted RBP20.5■□□□□ 0.87
PBX4-202ENST00000557978 PGAP2Q9UHJ9 254 aa20.5■□□□□ 0.87
PBX4-202ENST00000557978 EGFRP00533 1210 aa20.49■□□□□ 0.87
PBX4-202ENST00000557978 BCL11AQ9H165 835 aa20.49■□□□□ 0.87
PBX4-202ENST00000557978 TLR7Q9NYK1 1049 aaKnown RBP20.49■□□□□ 0.87
PBX4-202ENST00000557978 HMG20BQ9P0W2 317 aa20.49■□□□□ 0.87
PBX4-202ENST00000557978 SERPINA10Q9UK55 444 aa20.49■□□□□ 0.87
PBX4-202ENST00000557978 MCAMP43121 646 aa20.48■□□□□ 0.87
PBX4-202ENST00000557978 HDLBPQ00341 1268 aaKnown RBP20.48■□□□□ 0.87
PBX4-202ENST00000557978 DLGAP5Q15398 846 aa20.48■□□□□ 0.87
PBX4-202ENST00000557978 SPTY2D1Q68D10 685 aaPredicted RBP20.48■□□□□ 0.87
PBX4-202ENST00000557978 MTMR14Q8NCE2 650 aa20.48■□□□□ 0.87
PBX4-202ENST00000557978 MRIQ9BWK5 157 aa20.48■□□□□ 0.87
PBX4-202ENST00000557978 WNT10BO00744 389 aa20.47■□□□□ 0.87
PBX4-202ENST00000557978 LDHBP07195 334 aaKnown RBP20.47■□□□□ 0.87
PBX4-202ENST00000557978 RBM5P52756 815 aaKnown RBP eCLIP20.47■□□□□ 0.87
PBX4-202ENST00000557978 SCARF1Q14162 830 aa20.47■□□□□ 0.87
PBX4-202ENST00000557978 CNTROBQ8N137 903 aa20.47■□□□□ 0.87
PBX4-202ENST00000557978 DCPSQ96C86 337 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms