RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 VGLL2Q8N8G2 317 aa11.27□□□□□ -0.61
CHD8-214ENST00000557727 COPRSQ9NQ92 184 aa11.27□□□□□ -0.61
CHD8-214ENST00000557727 POLLQ9UGP5 575 aa11.27□□□□□ -0.61
CHD8-214ENST00000557727 PA2G4Q9UQ80 394 aaKnown RBP11.27□□□□□ -0.61
CHD8-214ENST00000557727 CHMP3Q9Y3E7 222 aa11.27□□□□□ -0.61
CHD8-214ENST00000557727 SRGAP3O43295 1099 aa11.26□□□□□ -0.61
CHD8-214ENST00000557727 PDE4AP27815 886 aa11.26□□□□□ -0.61
CHD8-214ENST00000557727 FKBP4Q02790 459 aaKnown RBP eCLIP11.26□□□□□ -0.61
CHD8-214ENST00000557727 ARHGAP27Q6ZUM4 889 aa11.26□□□□□ -0.61
CHD8-214ENST00000557727 RTKN2Q8IZC4 609 aa11.26□□□□□ -0.61
CHD8-214ENST00000557727 HDAC5Q9UQL6 1122 aa11.26□□□□□ -0.61
CHD8-214ENST00000557727 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.26□□□□□ -0.61
CHD8-214ENST00000557727 MYH13Q9UKX3 1938 aa11.25□□□□□ -0.61
CHD8-214ENST00000557727 SNAP23O00161 211 aa11.25□□□□□ -0.61
CHD8-214ENST00000557727 EYA2O00167 538 aa11.25□□□□□ -0.61
CHD8-214ENST00000557727 IGHMBP2P38935 993 aaKnown RBP11.25□□□□□ -0.61
CHD8-214ENST00000557727 CHRNDQ07001 517 aa11.25□□□□□ -0.61
CHD8-214ENST00000557727 GRIPAP1Q4V328 841 aa11.25□□□□□ -0.61
CHD8-214ENST00000557727 PPP1R15BQ5SWA1 713 aa11.25□□□□□ -0.61
CHD8-214ENST00000557727 MPNDQ8N594 471 aa11.25□□□□□ -0.61
CHD8-214ENST00000557727 TBC1D16Q8TBP0 767 aa11.25□□□□□ -0.61
CHD8-214ENST00000557727 GPR101Q96P66 508 aaPredicted RBP11.25□□□□□ -0.61
CHD8-214ENST00000557727 TAOK3Q9H2K8 898 aa11.25□□□□□ -0.61
CHD8-214ENST00000557727 PCDHB15Q9Y5E8 787 aa11.25□□□□□ -0.61
CHD8-214ENST00000557727 CIAO1O76071 339 aa11.24□□□□□ -0.61
CHD8-214ENST00000557727 KLRK1P26718 216 aa11.24□□□□□ -0.61
CHD8-214ENST00000557727 LDHAL6AQ6ZMR3 332 aa11.24□□□□□ -0.61
CHD8-214ENST00000557727 HELBQ8NG08 1087 aaPredicted RBP11.24□□□□□ -0.61
CHD8-214ENST00000557727 EXOC6Q8TAG9 804 aa11.24□□□□□ -0.61
CHD8-214ENST00000557727 MPHOSPH8Q99549 860 aa11.24□□□□□ -0.61
CHD8-214ENST00000557727 ZNF277Q9NRM2 450 aaPredicted RBP11.24□□□□□ -0.61
CHD8-214ENST00000557727 NSFL1CQ9UNZ2 370 aaKnown RBP11.24□□□□□ -0.61
CHD8-214ENST00000557727 NOP58Q9Y2X3 529 aaKnown RBP11.24□□□□□ -0.61
CHD8-214ENST00000557727 XDHP47989 1333 aa11.24□□□□□ -0.61
CHD8-214ENST00000557727 TAF5LO75529 589 aa11.23□□□□□ -0.61
CHD8-214ENST00000557727 LMNB1P20700 586 aa11.23□□□□□ -0.61
CHD8-214ENST00000557727 IARSP41252 1262 aaKnown RBP11.23□□□□□ -0.61
CHD8-214ENST00000557727 KIAA2012Q0VF49 1180 aa11.23□□□□□ -0.61
CHD8-214ENST00000557727 DPP8Q6V1X1 898 aaPredicted RBP11.23□□□□□ -0.61
CHD8-214ENST00000557727 TXNRD3Q86VQ6 643 aa11.23□□□□□ -0.61
CHD8-214ENST00000557727 PLA2G2EQ9NZK7 142 aa11.23□□□□□ -0.61
CHD8-214ENST00000557727 AKAP11Q9UKA4 1901 aa11.23□□□□□ -0.61
CHD8-214ENST00000557727 SASH1O94885 1247 aa11.22□□□□□ -0.61
CHD8-214ENST00000557727 FGFR2P21802 821 aa11.22□□□□□ -0.61
CHD8-214ENST00000557727 IRX6P78412 446 aaPredicted RBP11.22□□□□□ -0.61
CHD8-214ENST00000557727 AOC3Q16853 763 aa11.22□□□□□ -0.61
CHD8-214ENST00000557727 C9orf131Q5VYM1 1079 aa11.22□□□□□ -0.61
CHD8-214ENST00000557727 MROH5Q6ZUA9 1318 aa11.22□□□□□ -0.61
CHD8-214ENST00000557727 C15orf52Q6ZUT6 534 aaKnown RBP11.22□□□□□ -0.61
CHD8-214ENST00000557727 RPAP2Q8IXW5 612 aaPredicted RBP11.22□□□□□ -0.61
CHD8-214ENST00000557727 KCNK17Q96T54 332 aa11.22□□□□□ -0.61
CHD8-214ENST00000557727 SIL1Q9H173 461 aa11.22□□□□□ -0.61
CHD8-214ENST00000557727 MED23Q9ULK4 1368 aa11.22□□□□□ -0.61
CHD8-214ENST00000557727 WDR90Q96KV7 1748 aa11.21□□□□□ -0.61
CHD8-214ENST00000557727 ZNF804BA4D1E1 1349 aa11.21□□□□□ -0.61
CHD8-214ENST00000557727 YDJCA8MPS7 323 aa11.21□□□□□ -0.61
CHD8-214ENST00000557727 UFL1O94874 794 aa11.21□□□□□ -0.61
CHD8-214ENST00000557727 PDE8BO95263 885 aa11.21□□□□□ -0.61
CHD8-214ENST00000557727 ATP2B4P23634 1241 aa11.21□□□□□ -0.61
CHD8-214ENST00000557727 TAF7LQ5H9L4 462 aa11.21□□□□□ -0.61
CHD8-214ENST00000557727 ANKRD2Q9GZV1 360 aa11.21□□□□□ -0.61
CHD8-214ENST00000557727 VPS33BQ9H267 617 aa11.21□□□□□ -0.61
CHD8-214ENST00000557727 CHMP4BQ9H444 224 aaKnown RBP11.21□□□□□ -0.61
CHD8-214ENST00000557727 CNNM1Q9NRU3 951 aa11.21□□□□□ -0.61
CHD8-214ENST00000557727 RNF181Q9P0P0 153 aa11.21□□□□□ -0.61
CHD8-214ENST00000557727 ANKIB1Q9P2G1 1089 aa11.21□□□□□ -0.61
CHD8-214ENST00000557727 GGA1Q9UJY5 639 aa11.21□□□□□ -0.61
CHD8-214ENST00000557727 LEMD3Q9Y2U8 911 aa11.21□□□□□ -0.61
CHD8-214ENST00000557727 ZNF609O15014 1411 aa11.2□□□□□ -0.62
CHD8-214ENST00000557727 FZD9O00144 591 aa11.2□□□□□ -0.62
CHD8-214ENST00000557727 GTPBP6O43824 516 aaPredicted RBP11.2□□□□□ -0.62
CHD8-214ENST00000557727 IL15P40933 162 aaPredicted RBP11.2□□□□□ -0.62
CHD8-214ENST00000557727 ZNF454Q8N9F8 522 aa11.2□□□□□ -0.62
CHD8-214ENST00000557727 SLC4A5Q9BY07 1137 aa11.2□□□□□ -0.62
CHD8-214ENST00000557727 MYO5AQ9Y4I1 1855 aaKnown RBP11.2□□□□□ -0.62
CHD8-214ENST00000557727 ZNF541Q9H0D2 1346 aa11.19□□□□□ -0.62
CHD8-214ENST00000557727 ZC3H4Q9UPT8 1303 aaKnown RBP11.19□□□□□ -0.62
CHD8-214ENST00000557727 C6orf229H3BNL8 230 aa11.19□□□□□ -0.62
CHD8-214ENST00000557727 PPIP5K2O43314 1243 aa11.19□□□□□ -0.62
CHD8-214ENST00000557727 TFCP2Q12800 502 aa11.19□□□□□ -0.62
CHD8-214ENST00000557727 UBE4AQ14139 1066 aa11.19□□□□□ -0.62
CHD8-214ENST00000557727 WASHC4Q2M389 1173 aa11.19□□□□□ -0.62
CHD8-214ENST00000557727 METTL24Q5JXM2 366 aa11.19□□□□□ -0.62
CHD8-214ENST00000557727 SUPT20HQ8NEM7 779 aa11.19□□□□□ -0.62
CHD8-214ENST00000557727 VPS9D1Q9Y2B5 631 aa11.19□□□□□ -0.62
CHD8-214ENST00000557727 EXOC6BQ9Y2D4 811 aa11.19□□□□□ -0.62
CHD8-214ENST00000557727 COL1A1P02452 1464 aaPredicted RBP11.19□□□□□ -0.62
CHD8-214ENST00000557727 SCN4AP35499 1836 aa11.19□□□□□ -0.62
CHD8-214ENST00000557727 SURF6O75683 361 aaKnown RBP11.18□□□□□ -0.62
CHD8-214ENST00000557727 FOSBP53539 338 aa11.18□□□□□ -0.62
CHD8-214ENST00000557727 AAMPQ13685 434 aa11.18□□□□□ -0.62
CHD8-214ENST00000557727 LARGE2Q8N3Y3 721 aa11.18□□□□□ -0.62
CHD8-214ENST00000557727 TMX4Q9H1E5 349 aaPredicted RBP11.18□□□□□ -0.62
CHD8-214ENST00000557727 KCNQ5Q9NR82 932 aa11.18□□□□□ -0.62
CHD8-214ENST00000557727 PUM3Q15397 648 aaKnown RBP11.17□□□□□ -0.62
CHD8-214ENST00000557727 FBXO33Q7Z6M2 555 aa11.17□□□□□ -0.62
CHD8-214ENST00000557727 FAM84BQ96KN1 310 aaPredicted RBP11.17□□□□□ -0.62
CHD8-214ENST00000557727 EYA3Q99504 573 aa11.17□□□□□ -0.62
CHD8-214ENST00000557727 DCTPP1Q9H773 170 aa11.17□□□□□ -0.62
CHD8-214ENST00000557727 DBNDD1Q9H9R9 158 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms