RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 PSMD14O00487 310 aa18.7■□□□□ 0.58
NEDD1-213ENST00000557644 PDE4AP27815 886 aa18.7■□□□□ 0.58
NEDD1-213ENST00000557644 EIF6P56537 245 aaKnown RBP18.7■□□□□ 0.58
NEDD1-213ENST00000557644 TTLL5Q6EMB2 1281 aa18.7■□□□□ 0.58
NEDD1-213ENST00000557644 SNRKQ9NRH2 765 aa18.7■□□□□ 0.58
NEDD1-213ENST00000557644 HMG20BQ9P0W2 317 aa18.7■□□□□ 0.58
NEDD1-213ENST00000557644 USP17L3A6NCW0 530 aa18.69■□□□□ 0.58
NEDD1-213ENST00000557644 USP17L4A6NCW7 530 aa18.69■□□□□ 0.58
NEDD1-213ENST00000557644 MX1P20591 662 aa18.69■□□□□ 0.58
NEDD1-213ENST00000557644 USP17L1Q7RTZ2 530 aa18.69■□□□□ 0.58
NEDD1-213ENST00000557644 UQCRFS1P1P0C7P4 283 aa18.69■□□□□ 0.58
NEDD1-213ENST00000557644 CIAPIN1Q6FI81 312 aa18.69■□□□□ 0.58
NEDD1-213ENST00000557644 ECHDC1Q9NTX5 307 aa18.69■□□□□ 0.58
NEDD1-213ENST00000557644 ZBTB12Q9Y330 459 aaPredicted RBP18.69■□□□□ 0.58
NEDD1-213ENST00000557644 GJA3Q9Y6H8 435 aa18.69■□□□□ 0.58
NEDD1-213ENST00000557644 DACT2Q5SW24 774 aa18.68■□□□□ 0.58
NEDD1-213ENST00000557644 SPATA5Q8NB90 893 aa18.68■□□□□ 0.58
NEDD1-213ENST00000557644 BOLA2Q9H3K6 86 aa18.68■□□□□ 0.58
NEDD1-213ENST00000557644 DDNO94850 711 aaPredicted RBP18.68■□□□□ 0.58
NEDD1-213ENST00000557644 STRIP1Q5VSL9 837 aa18.68■□□□□ 0.58
NEDD1-213ENST00000557644 ZNF512BQ96KM6 892 aaPredicted RBP18.68■□□□□ 0.58
NEDD1-213ENST00000557644 DENND2AQ9ULE3 1009 aa18.68■□□□□ 0.58
NEDD1-213ENST00000557644 VIL1P09327 827 aaKnown RBP18.67■□□□□ 0.58
NEDD1-213ENST00000557644 PDE1AP54750 535 aa18.67■□□□□ 0.58
NEDD1-213ENST00000557644 PLEKHM2Q8IWE5 1019 aa18.67■□□□□ 0.58
NEDD1-213ENST00000557644 CERS5Q8N5B7 392 aa18.67■□□□□ 0.58
NEDD1-213ENST00000557644 FAM205AQ6ZU69 1335 aa18.67■□□□□ 0.58
NEDD1-213ENST00000557644 SEMA3EO15041 775 aa18.67■□□□□ 0.58
NEDD1-213ENST00000557644 ATP5JP18859 108 aa18.67■□□□□ 0.58
NEDD1-213ENST00000557644 ZAP70P43403 619 aa18.67■□□□□ 0.58
NEDD1-213ENST00000557644 PI4K2BQ8TCG2 481 aa18.67■□□□□ 0.58
NEDD1-213ENST00000557644 GPATCH3Q96I76 525 aa18.67■□□□□ 0.58
NEDD1-213ENST00000557644 TNIP1Q15025 636 aa18.66■□□□□ 0.58
NEDD1-213ENST00000557644 GRIK5Q16478 980 aa18.66■□□□□ 0.58
NEDD1-213ENST00000557644 MFSD14BQ5SR56 506 aa18.66■□□□□ 0.58
NEDD1-213ENST00000557644 TBC1D9Q6ZT07 1266 aa18.66■□□□□ 0.58
NEDD1-213ENST00000557644 ZC3H4Q9UPT8 1303 aaKnown RBP18.66■□□□□ 0.58
NEDD1-213ENST00000557644 EDC3Q96F86 508 aaKnown RBP18.66■□□□□ 0.58
NEDD1-213ENST00000557644 STAP2Q9UGK3 403 aa18.66■□□□□ 0.58
NEDD1-213ENST00000557644 RSBN1LQ6PCB5 846 aaPredicted RBP18.65■□□□□ 0.58
NEDD1-213ENST00000557644 GPC2Q8N158 579 aa18.65■□□□□ 0.58
NEDD1-213ENST00000557644 DNAJC2Q99543 621 aaKnown RBP18.65■□□□□ 0.58
NEDD1-213ENST00000557644 TTC41PQ6P2S7 1318 aa18.65■□□□□ 0.58
NEDD1-213ENST00000557644 CYP2E1P05181 493 aaPredicted RBP18.64■□□□□ 0.58
NEDD1-213ENST00000557644 ANTXR1Q9H6X2 564 aa18.64■□□□□ 0.58
NEDD1-213ENST00000557644 ZNF646O15015 1829 aaPredicted RBP18.64■□□□□ 0.57
NEDD1-213ENST00000557644 GLTPD2A6NH11 291 aa18.64■□□□□ 0.57
NEDD1-213ENST00000557644 DPY19L2Q6NUT2 758 aa18.64■□□□□ 0.57
NEDD1-213ENST00000557644 AKAP11Q9UKA4 1901 aa18.64■□□□□ 0.57
NEDD1-213ENST00000557644 ZBTB22O15209 634 aa18.63■□□□□ 0.57
NEDD1-213ENST00000557644 MAP4K4O95819 1239 aaPredicted RBP18.63■□□□□ 0.57
NEDD1-213ENST00000557644 GMPSP49915 693 aaPredicted RBP18.63■□□□□ 0.57
NEDD1-213ENST00000557644 WDR66Q8TBY9 1149 aa18.63■□□□□ 0.57
NEDD1-213ENST00000557644 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.63■□□□□ 0.57
NEDD1-213ENST00000557644 HAUS7Q99871 368 aa18.63■□□□□ 0.57
NEDD1-213ENST00000557644 ABCF2Q9UG63 623 aa18.63■□□□□ 0.57
NEDD1-213ENST00000557644 SHTN1A0MZ66 631 aa18.63■□□□□ 0.57
NEDD1-213ENST00000557644 F8W031 263 aaPredicted RBP18.63■□□□□ 0.57
NEDD1-213ENST00000557644 PRDX5P30044 214 aa18.63■□□□□ 0.57
NEDD1-213ENST00000557644 KIAA0825Q8IV33 1275 aa18.63■□□□□ 0.57
NEDD1-213ENST00000557644 GMLQ99445 158 aa18.63■□□□□ 0.57
NEDD1-213ENST00000557644 MYH13Q9UKX3 1938 aa18.63■□□□□ 0.57
NEDD1-213ENST00000557644 PDS5AQ29RF7 1337 aaKnown RBP18.63■□□□□ 0.57
NEDD1-213ENST00000557644 PIH1D3Q9NQM4 214 aaKnown RBP18.62■□□□□ 0.57
NEDD1-213ENST00000557644 PSME4Q14997 1843 aa18.62■□□□□ 0.57
NEDD1-213ENST00000557644 GOLIM4O00461 696 aa18.62■□□□□ 0.57
NEDD1-213ENST00000557644 ERC2O15083 957 aa18.62■□□□□ 0.57
NEDD1-213ENST00000557644 GLRX3O76003 335 aaKnown RBP18.62■□□□□ 0.57
NEDD1-213ENST00000557644 ZNF526Q8TF50 670 aaPredicted RBP18.62■□□□□ 0.57
NEDD1-213ENST00000557644 TBC1D22AQ8WUA7 517 aa18.62■□□□□ 0.57
NEDD1-213ENST00000557644 RGS3P49796 1198 aa18.61■□□□□ 0.57
NEDD1-213ENST00000557644 SCNN1DP51172 638 aa18.61■□□□□ 0.57
NEDD1-213ENST00000557644 OSBPL3Q9H4L5 887 aa18.61■□□□□ 0.57
NEDD1-213ENST00000557644 SALL1Q9NSC2 1324 aa18.61■□□□□ 0.57
NEDD1-213ENST00000557644 PAG1Q9NWQ8 432 aa18.61■□□□□ 0.57
NEDD1-213ENST00000557644 FKBP1AP62942 108 aaKnown RBP18.6■□□□□ 0.57
NEDD1-213ENST00000557644 AGBL3Q8NEM8 1001 aa18.6■□□□□ 0.57
NEDD1-213ENST00000557644 MYO3BQ8WXR4 1341 aa18.59■□□□□ 0.57
NEDD1-213ENST00000557644 TTF2Q9UNY4 1162 aaKnown RBP18.59■□□□□ 0.57
NEDD1-213ENST00000557644 AOX1Q06278 1338 aa18.59■□□□□ 0.57
NEDD1-213ENST00000557644 LDHBP07195 334 aaKnown RBP18.59■□□□□ 0.57
NEDD1-213ENST00000557644 RPS12P25398 132 aaKnown RBP18.59■□□□□ 0.57
NEDD1-213ENST00000557644 EPS15P42566 896 aa18.59■□□□□ 0.57
NEDD1-213ENST00000557644 MICALL2Q8IY33 904 aa18.59■□□□□ 0.57
NEDD1-213ENST00000557644 GPRC5DQ9NZD1 345 aa18.59■□□□□ 0.57
NEDD1-213ENST00000557644 LRP2BPQ9P2M1 347 aa18.59■□□□□ 0.57
NEDD1-213ENST00000557644 CNOT7Q9UIV1 285 aaKnown RBP18.59■□□□□ 0.57
NEDD1-213ENST00000557644 ZNF384Q8TF68 577 aa18.58■□□□□ 0.56
NEDD1-213ENST00000557644 DPF2Q92785 391 aa18.58■□□□□ 0.56
NEDD1-213ENST00000557644 L3MBTL3Q96JM7 780 aaPredicted RBP18.58■□□□□ 0.56
NEDD1-213ENST00000557644 POTECB2RU33 542 aa18.57■□□□□ 0.56
NEDD1-213ENST00000557644 IDH1O75874 414 aaKnown RBP18.57■□□□□ 0.56
NEDD1-213ENST00000557644 USP17L8P0C7I0 530 aa18.57■□□□□ 0.56
NEDD1-213ENST00000557644 ERICH6Q7L0X2 663 aa18.57■□□□□ 0.56
NEDD1-213ENST00000557644 ZGPATQ8N5A5 531 aaKnown RBP18.57■□□□□ 0.56
NEDD1-213ENST00000557644 RAI14Q9P0K7 980 aa18.57■□□□□ 0.56
NEDD1-213ENST00000557644 EGFRP00533 1210 aa18.57■□□□□ 0.56
NEDD1-213ENST00000557644 GSPT1P15170 499 aaKnown RBP18.57■□□□□ 0.56
NEDD1-213ENST00000557644 DIXDC1Q155Q3 683 aa18.57■□□□□ 0.56
NEDD1-213ENST00000557644 PCDHAC2Q9Y5I4 1007 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms