RNA–Protein interactions for RNA: ENST00000557592.5

APEX1-220, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-220ENST00000557592 B4GALNT3Q6L9W6 998 aa13.92□□□□□ -0.18
APEX1-220ENST00000557592 SMC5Q8IY18 1101 aa13.92□□□□□ -0.18
APEX1-220ENST00000557592 MXD3Q9BW11 206 aa13.92□□□□□ -0.18
APEX1-220ENST00000557592 ZBTB12Q9Y330 459 aaPredicted RBP13.92□□□□□ -0.18
APEX1-220ENST00000557592 SEMA3EO15041 775 aa13.91□□□□□ -0.18
APEX1-220ENST00000557592 RASGRF1Q13972 1273 aa13.91□□□□□ -0.18
APEX1-220ENST00000557592 RSBN1LQ6PCB5 846 aaPredicted RBP13.91□□□□□ -0.18
APEX1-220ENST00000557592 L3MBTL3Q96JM7 780 aaPredicted RBP13.91□□□□□ -0.18
APEX1-220ENST00000557592 COL1A1P02452 1464 aaPredicted RBP13.91□□□□□ -0.18
APEX1-220ENST00000557592 FAM205AQ6ZU69 1335 aa13.9□□□□□ -0.18
APEX1-220ENST00000557592 WDR90Q96KV7 1748 aa13.9□□□□□ -0.18
APEX1-220ENST00000557592 UQCRFS1P1P0C7P4 283 aa13.9□□□□□ -0.18
APEX1-220ENST00000557592 RPS12P25398 132 aaKnown RBP13.9□□□□□ -0.18
APEX1-220ENST00000557592 ARID4AP29374 1257 aaPredicted RBP13.9□□□□□ -0.18
APEX1-220ENST00000557592 GPBP1L1Q9HC44 474 aaPredicted RBP13.9□□□□□ -0.18
APEX1-220ENST00000557592 DENND2AQ9ULE3 1009 aa13.9□□□□□ -0.18
APEX1-220ENST00000557592 MYO3BQ8WXR4 1341 aa13.9□□□□□ -0.19
APEX1-220ENST00000557592 LMOD1P29536 600 aaPredicted RBP13.89□□□□□ -0.19
APEX1-220ENST00000557592 SCNN1DP51172 638 aa13.89□□□□□ -0.19
APEX1-220ENST00000557592 SCARF1Q14162 830 aa13.89□□□□□ -0.19
APEX1-220ENST00000557592 MFSD14BQ5SR56 506 aa13.89□□□□□ -0.19
APEX1-220ENST00000557592 PI16Q6UXB8 463 aa13.89□□□□□ -0.19
APEX1-220ENST00000557592 ZNF784Q8NCA9 323 aaPredicted RBP13.89□□□□□ -0.19
APEX1-220ENST00000557592 AGBL3Q8NEM8 1001 aa13.89□□□□□ -0.19
APEX1-220ENST00000557592 CCDC136Q96JN2 1154 aa13.89□□□□□ -0.19
APEX1-220ENST00000557592 RRAGCQ9HB90 399 aa13.89□□□□□ -0.19
APEX1-220ENST00000557592 NMRK2Q9NPI5 230 aa13.89□□□□□ -0.19
APEX1-220ENST00000557592 SCN4AP35499 1836 aa13.89□□□□□ -0.19
APEX1-220ENST00000557592 AKAP11Q9UKA4 1901 aa13.88□□□□□ -0.19
APEX1-220ENST00000557592 IQCA1LA6NCM1 817 aa13.88□□□□□ -0.19
APEX1-220ENST00000557592 EPS15P42566 896 aa13.88□□□□□ -0.19
APEX1-220ENST00000557592 MCAMP43121 646 aa13.88□□□□□ -0.19
APEX1-220ENST00000557592 FKBP1AP62942 108 aaKnown RBP13.88□□□□□ -0.19
APEX1-220ENST00000557592 NUCB1Q02818 461 aa13.88□□□□□ -0.19
APEX1-220ENST00000557592 MICALL2Q8IY33 904 aa13.88□□□□□ -0.19
APEX1-220ENST00000557592 C16orf71Q8IYS4 520 aaPredicted RBP13.88□□□□□ -0.19
APEX1-220ENST00000557592 CERS5Q8N5B7 392 aa13.88□□□□□ -0.19
APEX1-220ENST00000557592 SPATA5Q8NB90 893 aa13.88□□□□□ -0.19
APEX1-220ENST00000557592 WDR66Q8TBY9 1149 aa13.88□□□□□ -0.19
APEX1-220ENST00000557592 TBC1D22AQ8WUA7 517 aa13.88□□□□□ -0.19
APEX1-220ENST00000557592 DPF2Q92785 391 aa13.88□□□□□ -0.19
APEX1-220ENST00000557592 GPATCH3Q96I76 525 aa13.88□□□□□ -0.19
APEX1-220ENST00000557592 GMLQ99445 158 aa13.88□□□□□ -0.19
APEX1-220ENST00000557592 LNPKQ9C0E8 428 aa13.88□□□□□ -0.19
APEX1-220ENST00000557592 SNRKQ9NRH2 765 aa13.88□□□□□ -0.19
APEX1-220ENST00000557592 GPRC5DQ9NZD1 345 aa13.88□□□□□ -0.19
APEX1-220ENST00000557592 HMG20BQ9P0W2 317 aa13.88□□□□□ -0.19
APEX1-220ENST00000557592 HACL1Q9UJ83 578 aa13.88□□□□□ -0.19
APEX1-220ENST00000557592 SHTN1A0MZ66 631 aa13.87□□□□□ -0.19
APEX1-220ENST00000557592 F8W031 263 aaPredicted RBP13.87□□□□□ -0.19
APEX1-220ENST00000557592 ZBTB22O15209 634 aa13.87□□□□□ -0.19
APEX1-220ENST00000557592 USP17L8P0C7I0 530 aa13.87□□□□□ -0.19
APEX1-220ENST00000557592 VEGFAP15692 232 aaPredicted RBP13.87□□□□□ -0.19
APEX1-220ENST00000557592 ERICH6BQ5W0A0 696 aa13.87□□□□□ -0.19
APEX1-220ENST00000557592 CHD1LQ86WJ1 897 aa13.87□□□□□ -0.19
APEX1-220ENST00000557592 KIAA0825Q8IV33 1275 aa13.87□□□□□ -0.19
APEX1-220ENST00000557592 OTUD7AQ8TE49 926 aaPredicted RBP13.87□□□□□ -0.19
APEX1-220ENST00000557592 ZNF512BQ96KM6 892 aaPredicted RBP13.87□□□□□ -0.19
APEX1-220ENST00000557592 CNOT7Q9UIV1 285 aaKnown RBP13.87□□□□□ -0.19
APEX1-220ENST00000557592 PDS5AQ29RF7 1337 aaKnown RBP13.87□□□□□ -0.19
APEX1-220ENST00000557592 POTECB2RU33 542 aa13.86□□□□□ -0.19
APEX1-220ENST00000557592 H7C1D1 291 aa13.86□□□□□ -0.19
APEX1-220ENST00000557592 TSHZ3Q63HK5 1081 aa13.86□□□□□ -0.19
APEX1-220ENST00000557592 OGFOD1Q8N543 542 aa13.86□□□□□ -0.19
APEX1-220ENST00000557592 ECHDC1Q9NTX5 307 aa13.86□□□□□ -0.19
APEX1-220ENST00000557592 ATP5JP18859 108 aa13.85□□□□□ -0.19
APEX1-220ENST00000557592 MX1P20591 662 aa13.85□□□□□ -0.19
APEX1-220ENST00000557592 EPHX2P34913 555 aa13.85□□□□□ -0.19
APEX1-220ENST00000557592 ZAP70P43403 619 aa13.85□□□□□ -0.19
APEX1-220ENST00000557592 GRIK5Q16478 980 aa13.85□□□□□ -0.19
APEX1-220ENST00000557592 CENPQQ7L2Z9 268 aaPredicted RBP13.85□□□□□ -0.19
APEX1-220ENST00000557592 ZGPATQ8N5A5 531 aaKnown RBP13.85□□□□□ -0.19
APEX1-220ENST00000557592 TAF1DQ9H5J8 278 aaPredicted RBP13.85□□□□□ -0.19
APEX1-220ENST00000557592 PPP4R2Q9NY27 417 aa13.85□□□□□ -0.19
APEX1-220ENST00000557592 ABCF2Q9UG63 623 aa13.85□□□□□ -0.19
APEX1-220ENST00000557592 HDAC9Q9UKV0 1011 aa13.85□□□□□ -0.19
APEX1-220ENST00000557592 TTF2Q9UNY4 1162 aaKnown RBP13.85□□□□□ -0.19
APEX1-220ENST00000557592 NDUFB9Q9Y6M9 179 aa13.85□□□□□ -0.19
APEX1-220ENST00000557592 SALL1Q9NSC2 1324 aa13.85□□□□□ -0.19
APEX1-220ENST00000557592 LDHBP07195 334 aaKnown RBP13.84□□□□□ -0.19
APEX1-220ENST00000557592 ZNF280AP59817 542 aaPredicted RBP13.84□□□□□ -0.19
APEX1-220ENST00000557592 TBC1D10BQ4KMP7 808 aaPredicted RBP13.84□□□□□ -0.19
APEX1-220ENST00000557592 RBM26Q5T8P6 1007 aaKnown RBP13.84□□□□□ -0.19
APEX1-220ENST00000557592 TBC1D9Q6ZT07 1266 aa13.84□□□□□ -0.19
APEX1-220ENST00000557592 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.84□□□□□ -0.19
APEX1-220ENST00000557592 DNAJC2Q99543 621 aaKnown RBP13.84□□□□□ -0.19
APEX1-220ENST00000557592 BOLA2Q9H3K6 86 aa13.84□□□□□ -0.19
APEX1-220ENST00000557592 ADARB2Q9NS39 739 aaKnown RBP13.84□□□□□ -0.19
APEX1-220ENST00000557592 SUGT1Q9Y2Z0 365 aa13.84□□□□□ -0.19
APEX1-220ENST00000557592 CYP2E1P05181 493 aaPredicted RBP13.83□□□□□ -0.2
APEX1-220ENST00000557592 PRDX5P30044 214 aa13.83□□□□□ -0.2
APEX1-220ENST00000557592 KIF4BQ2VIQ3 1234 aa13.83□□□□□ -0.2
APEX1-220ENST00000557592 EAPPQ56P03 285 aaPredicted RBP13.83□□□□□ -0.2
APEX1-220ENST00000557592 SPTY2D1Q68D10 685 aaPredicted RBP13.83□□□□□ -0.2
APEX1-220ENST00000557592 SAMD7Q7Z3H4 446 aa13.83□□□□□ -0.2
APEX1-220ENST00000557592 MYOZ2Q9NPC6 264 aa13.83□□□□□ -0.2
APEX1-220ENST00000557592 RAI14Q9P0K7 980 aa13.83□□□□□ -0.2
APEX1-220ENST00000557592 MAST3O60307 1309 aa13.83□□□□□ -0.2
APEX1-220ENST00000557592 TTC41PQ6P2S7 1318 aa13.83□□□□□ -0.2
APEX1-220ENST00000557592 SALL3Q9BXA9 1300 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms