RNA–Protein interactions for RNA: ENST00000557478.5

NEDD1-212, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-212ENST00000557478 REM2Q8IYK8 340 aaPredicted RBP21.87■■□□□ 1.09
NEDD1-212ENST00000557478 CDCA5Q96FF9 252 aa21.87■■□□□ 1.09
NEDD1-212ENST00000557478 IFIT1P09914 478 aaKnown RBP21.86■■□□□ 1.09
NEDD1-212ENST00000557478 HNRNPUQ00839 825 aaKnown RBP eCLIP21.86■■□□□ 1.09
NEDD1-212ENST00000557478 PUM3Q15397 648 aaKnown RBP21.86■■□□□ 1.09
NEDD1-212ENST00000557478 TDRD7Q8NHU6 1098 aaKnown RBP21.86■■□□□ 1.09
NEDD1-212ENST00000557478 TBC1D22AQ8WUA7 517 aa21.86■■□□□ 1.09
NEDD1-212ENST00000557478 EYA2O00167 538 aa21.85■■□□□ 1.09
NEDD1-212ENST00000557478 CIAO1O76071 339 aa21.85■■□□□ 1.09
NEDD1-212ENST00000557478 RGMBQ6NW40 437 aa21.85■■□□□ 1.09
NEDD1-212ENST00000557478 FAM84BQ96KN1 310 aaPredicted RBP21.85■■□□□ 1.09
NEDD1-212ENST00000557478 PUS3Q9BZE2 481 aaKnown RBP21.85■■□□□ 1.09
NEDD1-212ENST00000557478 PPP2R3BQ9Y5P8 575 aa21.85■■□□□ 1.09
NEDD1-212ENST00000557478 SNAP23O00161 211 aa21.84■■□□□ 1.09
NEDD1-212ENST00000557478 NBPF9Q3BBW0 867 aa21.84■■□□□ 1.09
NEDD1-212ENST00000557478 COL1A1P02452 1464 aaPredicted RBP21.83■■□□□ 1.09
NEDD1-212ENST00000557478 FOXN1O15353 648 aa21.83■■□□□ 1.09
NEDD1-212ENST00000557478 FRAT2O75474 233 aaPredicted RBP21.83■■□□□ 1.09
NEDD1-212ENST00000557478 GRM1Q13255 1194 aa21.83■■□□□ 1.09
NEDD1-212ENST00000557478 COL13A1Q5TAT6 717 aaPredicted RBP21.83■■□□□ 1.09
NEDD1-212ENST00000557478 ATF7IPQ6VMQ6 1270 aa21.83■■□□□ 1.09
NEDD1-212ENST00000557478 FBXO33Q7Z6M2 555 aa21.83■■□□□ 1.09
NEDD1-212ENST00000557478 VGLL2Q8N8G2 317 aa21.83■■□□□ 1.09
NEDD1-212ENST00000557478 ZBED3Q96IU2 234 aaPredicted RBP21.83■■□□□ 1.09
NEDD1-212ENST00000557478 MXD3Q9BW11 206 aa21.83■■□□□ 1.09
NEDD1-212ENST00000557478 LRRC24Q50LG9 513 aa21.82■■□□□ 1.08
NEDD1-212ENST00000557478 MFSD14BQ5SR56 506 aa21.82■■□□□ 1.08
NEDD1-212ENST00000557478 LPIN2Q92539 896 aa21.82■■□□□ 1.08
NEDD1-212ENST00000557478 SERPINA10Q9UK55 444 aa21.82■■□□□ 1.08
NEDD1-212ENST00000557478 SUGT1Q9Y2Z0 365 aa21.82■■□□□ 1.08
NEDD1-212ENST00000557478 SLC5A1P13866 664 aa21.81■■□□□ 1.08
NEDD1-212ENST00000557478 GYG1P46976 350 aa21.81■■□□□ 1.08
NEDD1-212ENST00000557478 RFX5P48382 616 aaPredicted RBP21.81■■□□□ 1.08
NEDD1-212ENST00000557478 ZNF157P51786 506 aaPredicted RBP21.81■■□□□ 1.08
NEDD1-212ENST00000557478 PTPN12Q05209 780 aaKnown RBP21.81■■□□□ 1.08
NEDD1-212ENST00000557478 TNS4Q8IZW8 715 aa21.81■■□□□ 1.08
NEDD1-212ENST00000557478 ASTN2O75129 1339 aaPredicted RBP21.8■■□□□ 1.08
NEDD1-212ENST00000557478 THSD7BQ9C0I4 1608 aa21.8■■□□□ 1.08
NEDD1-212ENST00000557478 IL15P40933 162 aaPredicted RBP21.8■■□□□ 1.08
NEDD1-212ENST00000557478 HDLBPQ00341 1268 aaKnown RBP21.8■■□□□ 1.08
NEDD1-212ENST00000557478 TNFAIP1Q13829 316 aa21.8■■□□□ 1.08
NEDD1-212ENST00000557478 CERS5Q8N5B7 392 aa21.8■■□□□ 1.08
NEDD1-212ENST00000557478 CEP126Q9P2H0 1117 aa21.8■■□□□ 1.08
NEDD1-212ENST00000557478 ZBED9Q6R2W3 1325 aa21.8■■□□□ 1.08
NEDD1-212ENST00000557478 SPDYE2BA6NHP3 402 aa21.79■■□□□ 1.08
NEDD1-212ENST00000557478 UNCXA6NJT0 531 aa21.79■■□□□ 1.08
NEDD1-212ENST00000557478 SPDYE6P0CI01 402 aa21.79■■□□□ 1.08
NEDD1-212ENST00000557478 ZKSCAN2Q63HK3 967 aa21.79■■□□□ 1.08
NEDD1-212ENST00000557478 MRIQ9BWK5 157 aa21.79■■□□□ 1.08
NEDD1-212ENST00000557478 GNL3LQ9NVN8 582 aaKnown RBP21.79■■□□□ 1.08
NEDD1-212ENST00000557478 MAST3O60307 1309 aa21.79■■□□□ 1.08
NEDD1-212ENST00000557478 ZBTB22O15209 634 aa21.78■■□□□ 1.08
NEDD1-212ENST00000557478 FGFR2P21802 821 aa21.78■■□□□ 1.08
NEDD1-212ENST00000557478 CFAP100Q494V2 611 aa21.78■■□□□ 1.08
NEDD1-212ENST00000557478 ARMC9Q7Z3E5 817 aa21.78■■□□□ 1.08
NEDD1-212ENST00000557478 FRAT1Q92837 279 aaPredicted RBP21.78■■□□□ 1.08
NEDD1-212ENST00000557478 COPRSQ9NQ92 184 aa21.78■■□□□ 1.08
NEDD1-212ENST00000557478 LRRFIP2Q9Y608 721 aaKnown RBP21.78■■□□□ 1.08
NEDD1-212ENST00000557478 TRIM27P14373 513 aa21.77■■□□□ 1.08
NEDD1-212ENST00000557478 RBM5P52756 815 aaKnown RBP eCLIP21.77■■□□□ 1.08
NEDD1-212ENST00000557478 MTX1Q13505 466 aa21.77■■□□□ 1.08
NEDD1-212ENST00000557478 SUPT20HL1Q3ZLR7 823 aa21.77■■□□□ 1.08
NEDD1-212ENST00000557478 KLHDC4Q8TBB5 520 aa21.77■■□□□ 1.08
NEDD1-212ENST00000557478 DEFB129Q9H1M3 183 aa21.77■■□□□ 1.08
NEDD1-212ENST00000557478 TTF2Q9UNY4 1162 aaKnown RBP21.77■■□□□ 1.08
NEDD1-212ENST00000557478 AOC2O75106 756 aa21.76■■□□□ 1.07
NEDD1-212ENST00000557478 GNAI2P04899 355 aa21.76■■□□□ 1.07
NEDD1-212ENST00000557478 SLC10A3P09131 477 aa21.76■■□□□ 1.07
NEDD1-212ENST00000557478 WDR66Q8TBY9 1149 aa21.76■■□□□ 1.07
NEDD1-212ENST00000557478 MEIS3Q99687 375 aa21.76■■□□□ 1.07
NEDD1-212ENST00000557478 SAGE1Q9NXZ1 904 aa21.76■■□□□ 1.07
NEDD1-212ENST00000557478 A0A1B0GUL6 1792 aa21.75■■□□□ 1.07
NEDD1-212ENST00000557478 PAPPA2Q9BXP8 1791 aa21.75■■□□□ 1.07
NEDD1-212ENST00000557478 FAM155AB1AL88 458 aaPredicted RBP21.75■■□□□ 1.07
NEDD1-212ENST00000557478 F8W031 263 aaPredicted RBP21.75■■□□□ 1.07
NEDD1-212ENST00000557478 SEMA3EO15041 775 aa21.75■■□□□ 1.07
NEDD1-212ENST00000557478 PPP1R12BO60237 982 aaPredicted RBP21.75■■□□□ 1.07
NEDD1-212ENST00000557478 HSPA8P11142 646 aaKnown RBP21.75■■□□□ 1.07
NEDD1-212ENST00000557478 LBX1P52954 281 aa21.75■■□□□ 1.07
NEDD1-212ENST00000557478 TTLL12Q14166 644 aaPredicted RBP21.75■■□□□ 1.07
NEDD1-212ENST00000557478 ATG9AQ7Z3C6 839 aa21.75■■□□□ 1.07
NEDD1-212ENST00000557478 AKAP2Q9Y2D5 859 aa21.75■■□□□ 1.07
NEDD1-212ENST00000557478 BCAR3O75815 825 aa21.74■■□□□ 1.07
NEDD1-212ENST00000557478 DLK2Q6UY11 383 aa21.74■■□□□ 1.07
NEDD1-212ENST00000557478 SRGAP3O43295 1099 aa21.73■■□□□ 1.07
NEDD1-212ENST00000557478 TNNI2P48788 182 aa21.73■■□□□ 1.07
NEDD1-212ENST00000557478 BCAMP50895 628 aa21.73■■□□□ 1.07
NEDD1-212ENST00000557478 ATP2B3Q16720 1220 aa21.73■■□□□ 1.07
NEDD1-212ENST00000557478 FTSJ3Q8IY81 847 aaKnown RBP21.73■■□□□ 1.07
NEDD1-212ENST00000557478 ZNF646O15015 1829 aaPredicted RBP21.73■■□□□ 1.07
NEDD1-212ENST00000557478 MS4A1P11836 297 aa21.72■■□□□ 1.07
NEDD1-212ENST00000557478 TEKT1Q969V4 418 aa21.72■■□□□ 1.07
NEDD1-212ENST00000557478 PRMT6Q96LA8 375 aaPredicted RBP21.72■■□□□ 1.07
NEDD1-212ENST00000557478 SIL1Q9H173 461 aa21.72■■□□□ 1.07
NEDD1-212ENST00000557478 POLR2AP24928 1970 aaKnown RBP21.71■■□□□ 1.07
NEDD1-212ENST00000557478 CRKP46108 304 aa21.71■■□□□ 1.07
NEDD1-212ENST00000557478 CHAF1AQ13111 956 aaPredicted RBP21.71■■□□□ 1.07
NEDD1-212ENST00000557478 SPDYE2Q495Y8 402 aa21.71■■□□□ 1.07
NEDD1-212ENST00000557478 DZIP1LQ8IYY4 767 aaKnown RBP21.71■■□□□ 1.07
NEDD1-212ENST00000557478 ZGPATQ8N5A5 531 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms