RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 AGBL3Q8NEM8 1001 aa13.08□□□□□ -0.32
HNRNPC-232ENST00000557442 ADARB2Q9NS39 739 aaKnown RBP13.08□□□□□ -0.32
HNRNPC-232ENST00000557442 CNOT7Q9UIV1 285 aaKnown RBP13.08□□□□□ -0.32
HNRNPC-232ENST00000557442 IQSEC3Q9UPP2 1182 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-232ENST00000557442 EXOC6BQ9Y2D4 811 aa13.08□□□□□ -0.32
HNRNPC-232ENST00000557442 SUPT16HQ9Y5B9 1047 aaKnown RBP13.08□□□□□ -0.32
HNRNPC-232ENST00000557442 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-232ENST00000557442 SASH1O94885 1247 aa13.07□□□□□ -0.32
HNRNPC-232ENST00000557442 ADORA1P30542 326 aa13.07□□□□□ -0.32
HNRNPC-232ENST00000557442 C1QTNF8P60827 252 aa13.07□□□□□ -0.32
HNRNPC-232ENST00000557442 LDHDQ86WU2 507 aa13.07□□□□□ -0.32
HNRNPC-232ENST00000557442 SIRT2Q8IXJ6 389 aa13.07□□□□□ -0.32
HNRNPC-232ENST00000557442 SMC1BQ8NDV3 1235 aa13.07□□□□□ -0.32
HNRNPC-232ENST00000557442 TDRD7Q8NHU6 1098 aaKnown RBP13.07□□□□□ -0.32
HNRNPC-232ENST00000557442 CLEC11AQ9Y240 323 aa13.07□□□□□ -0.32
HNRNPC-232ENST00000557442 NOP58Q9Y2X3 529 aaKnown RBP13.07□□□□□ -0.32
HNRNPC-232ENST00000557442 COL1A1P02452 1464 aaPredicted RBP13.07□□□□□ -0.32
HNRNPC-232ENST00000557442 DOCK2Q92608 1830 aa13.06□□□□□ -0.32
HNRNPC-232ENST00000557442 USP17L8P0C7I0 530 aa13.06□□□□□ -0.32
HNRNPC-232ENST00000557442 TIMM10P62072 90 aa13.06□□□□□ -0.32
HNRNPC-232ENST00000557442 CHAF1AQ13111 956 aaPredicted RBP13.06□□□□□ -0.32
HNRNPC-232ENST00000557442 USP50Q70EL3 339 aaPredicted RBP13.06□□□□□ -0.32
HNRNPC-232ENST00000557442 ERC1Q8IUD2 1116 aa13.06□□□□□ -0.32
HNRNPC-232ENST00000557442 NEUROD6Q96NK8 337 aa13.06□□□□□ -0.32
HNRNPC-232ENST00000557442 GMLQ99445 158 aa13.06□□□□□ -0.32
HNRNPC-232ENST00000557442 FAM205AQ6ZU69 1335 aa13.06□□□□□ -0.32
HNRNPC-232ENST00000557442 APBB1O00213 710 aa13.05□□□□□ -0.32
HNRNPC-232ENST00000557442 PHKA1P46020 1223 aa13.05□□□□□ -0.32
HNRNPC-232ENST00000557442 KIF4BQ2VIQ3 1234 aa13.05□□□□□ -0.32
HNRNPC-232ENST00000557442 TBC1D10BQ4KMP7 808 aaPredicted RBP13.05□□□□□ -0.32
HNRNPC-232ENST00000557442 HSP90AB4PQ58FF6 505 aa13.05□□□□□ -0.32
HNRNPC-232ENST00000557442 TNNI3KQ59H18 835 aa13.05□□□□□ -0.32
HNRNPC-232ENST00000557442 MFSD14BQ5SR56 506 aa13.05□□□□□ -0.32
HNRNPC-232ENST00000557442 CHADLQ6NUI6 762 aa13.05□□□□□ -0.32
HNRNPC-232ENST00000557442 SAMD7Q7Z3H4 446 aa13.05□□□□□ -0.32
HNRNPC-232ENST00000557442 KIAA0825Q8IV33 1275 aa13.05□□□□□ -0.32
HNRNPC-232ENST00000557442 CERS5Q8N5B7 392 aa13.05□□□□□ -0.32
HNRNPC-232ENST00000557442 TRPM4Q8TD43 1214 aa13.05□□□□□ -0.32
HNRNPC-232ENST00000557442 XAGE2Q96GT9 111 aa13.05□□□□□ -0.32
HNRNPC-232ENST00000557442 GNL3LQ9NVN8 582 aaKnown RBP13.05□□□□□ -0.32
HNRNPC-232ENST00000557442 FPGT-TNNI3KV9GXZ4 949 aa13.05□□□□□ -0.32
HNRNPC-232ENST00000557442 AK9Q5TCS8 1911 aa13.05□□□□□ -0.32
HNRNPC-232ENST00000557442 EGFRP00533 1210 aa13.04□□□□□ -0.32
HNRNPC-232ENST00000557442 ZNF280AP59817 542 aaPredicted RBP13.04□□□□□ -0.32
HNRNPC-232ENST00000557442 FSTL1Q12841 308 aa13.04□□□□□ -0.32
HNRNPC-232ENST00000557442 GORABQ5T7V8 394 aa13.04□□□□□ -0.32
HNRNPC-232ENST00000557442 RBM26Q5T8P6 1007 aaKnown RBP13.04□□□□□ -0.32
HNRNPC-232ENST00000557442 CCDC102BQ68D86 513 aa13.04□□□□□ -0.32
HNRNPC-232ENST00000557442 OGFOD1Q8N543 542 aa13.04□□□□□ -0.32
HNRNPC-232ENST00000557442 CDK5RAP2Q96SN8 1893 aa13.03□□□□□ -0.32
HNRNPC-232ENST00000557442 F8W031 263 aaPredicted RBP13.03□□□□□ -0.32
HNRNPC-232ENST00000557442 FKBP1AP62942 108 aaKnown RBP13.03□□□□□ -0.32
HNRNPC-232ENST00000557442 MYOZ2Q9NPC6 264 aa13.03□□□□□ -0.32
HNRNPC-232ENST00000557442 GPR108Q9NPR9 543 aa13.03□□□□□ -0.32
HNRNPC-232ENST00000557442 HDAC9Q9UKV0 1011 aa13.03□□□□□ -0.32
HNRNPC-232ENST00000557442 SEMA3EO15041 775 aa13.02□□□□□ -0.33
HNRNPC-232ENST00000557442 HIRAP54198 1017 aaPredicted RBP13.02□□□□□ -0.33
HNRNPC-232ENST00000557442 MAP1SQ66K74 1059 aaPredicted RBP13.02□□□□□ -0.33
HNRNPC-232ENST00000557442 RHPN1Q8TCX5 695 aa13.02□□□□□ -0.33
HNRNPC-232ENST00000557442 TBC1D22AQ8WUA7 517 aa13.02□□□□□ -0.33
HNRNPC-232ENST00000557442 KIF1BPQ96EK5 621 aa13.02□□□□□ -0.33
HNRNPC-232ENST00000557442 BCL11AQ9H165 835 aa13.02□□□□□ -0.33
HNRNPC-232ENST00000557442 IL1RAPL2Q9NP60 686 aa13.02□□□□□ -0.33
HNRNPC-232ENST00000557442 PCDHB15Q9Y5E8 787 aa13.02□□□□□ -0.33
HNRNPC-232ENST00000557442 CEP350Q5VT06 3117 aa13.01□□□□□ -0.33
HNRNPC-232ENST00000557442 RASGRF1Q13972 1273 aa13.01□□□□□ -0.33
HNRNPC-232ENST00000557442 AACSQ86V21 672 aa13.01□□□□□ -0.33
HNRNPC-232ENST00000557442 CNKSR2Q8WXI2 1034 aa13.01□□□□□ -0.33
HNRNPC-232ENST00000557442 DBNDD2Q9BQY9 259 aa13.01□□□□□ -0.33
HNRNPC-232ENST00000557442 DENND2AQ9ULE3 1009 aa13.01□□□□□ -0.33
HNRNPC-232ENST00000557442 TTF2Q9UNY4 1162 aaKnown RBP13.01□□□□□ -0.33
HNRNPC-232ENST00000557442 FOCADQ5VW36 1801 aa13□□□□□ -0.33
HNRNPC-232ENST00000557442 RAB11FIP3O75154 756 aa13□□□□□ -0.33
HNRNPC-232ENST00000557442 MMP14P50281 582 aa13□□□□□ -0.33
HNRNPC-232ENST00000557442 IRX6P78412 446 aaPredicted RBP13□□□□□ -0.33
HNRNPC-232ENST00000557442 AAMPQ13685 434 aa13□□□□□ -0.33
HNRNPC-232ENST00000557442 TTC39AQ5SRH9 613 aa13□□□□□ -0.33
HNRNPC-232ENST00000557442 CNTROBQ8N137 903 aa13□□□□□ -0.33
HNRNPC-232ENST00000557442 EXOC6Q8TAG9 804 aa13□□□□□ -0.33
HNRNPC-232ENST00000557442 WDR66Q8TBY9 1149 aa13□□□□□ -0.33
HNRNPC-232ENST00000557442 ZC3H15Q8WU90 426 aaKnown RBP13□□□□□ -0.33
HNRNPC-232ENST00000557442 EAF2Q96CJ1 260 aaPredicted RBP13□□□□□ -0.33
HNRNPC-232ENST00000557442 CCDC8Q9H0W5 538 aaPredicted RBP13□□□□□ -0.33
HNRNPC-232ENST00000557442 TLR7Q9NYK1 1049 aaKnown RBP13□□□□□ -0.33
HNRNPC-232ENST00000557442 GGA3Q9NZ52 723 aa13□□□□□ -0.33
HNRNPC-232ENST00000557442 DBNLQ9UJU6 430 aaKnown RBP13□□□□□ -0.33
HNRNPC-232ENST00000557442 MAST3O60307 1309 aa12.99□□□□□ -0.33
HNRNPC-232ENST00000557442 ASTN2O75129 1339 aaPredicted RBP12.99□□□□□ -0.33
HNRNPC-232ENST00000557442 PDS5AQ29RF7 1337 aaKnown RBP12.99□□□□□ -0.33
HNRNPC-232ENST00000557442 UQCRFS1P1P0C7P4 283 aa12.99□□□□□ -0.33
HNRNPC-232ENST00000557442 ARID4AP29374 1257 aaPredicted RBP12.99□□□□□ -0.33
HNRNPC-232ENST00000557442 GRIK5Q16478 980 aa12.99□□□□□ -0.33
HNRNPC-232ENST00000557442 CCDC158Q5M9N0 1113 aa12.99□□□□□ -0.33
HNRNPC-232ENST00000557442 CLASRPQ8N2M8 674 aaKnown RBP12.99□□□□□ -0.33
HNRNPC-232ENST00000557442 SALL1Q9NSC2 1324 aa12.98□□□□□ -0.33
HNRNPC-232ENST00000557442 WNT10BO00744 389 aa12.98□□□□□ -0.33
HNRNPC-232ENST00000557442 HSPA6P17066 643 aa12.98□□□□□ -0.33
HNRNPC-232ENST00000557442 RBM5P52756 815 aaKnown RBP eCLIP12.98□□□□□ -0.335e-14■■□□□ 12.8
HNRNPC-232ENST00000557442 SCARF1Q14162 830 aa12.98□□□□□ -0.33
HNRNPC-232ENST00000557442 DLGAP5Q15398 846 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms