RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PYGLP06737 847 aa9.89□□□□□ -0.83
SYNE3-205ENST00000557275 MCM10Q7L590 875 aa9.89□□□□□ -0.83
SYNE3-205ENST00000557275 ZNF830Q96NB3 372 aaPredicted RBP9.89□□□□□ -0.83
SYNE3-205ENST00000557275 CECR2Q9BXF3 1484 aa9.89□□□□□ -0.83
SYNE3-205ENST00000557275 ZGPATQ8N5A5 531 aaKnown RBP9.89□□□□□ -0.83
SYNE3-205ENST00000557275 IDH1O75874 414 aaKnown RBP9.89□□□□□ -0.83
SYNE3-205ENST00000557275 EEF2P13639 858 aaKnown RBP9.89□□□□□ -0.83
SYNE3-205ENST00000557275 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.89□□□□□ -0.83
SYNE3-205ENST00000557275 VSIG1Q86XK7 387 aa9.89□□□□□ -0.83
SYNE3-205ENST00000557275 TCP11L2Q8N4U5 519 aa9.89□□□□□ -0.83
SYNE3-205ENST00000557275 TMCO5AQ8N6Q1 288 aa9.89□□□□□ -0.83
SYNE3-205ENST00000557275 NOB1Q9ULX3 412 aaKnown RBP9.89□□□□□ -0.83
SYNE3-205ENST00000557275 PLCB4Q15147 1175 aa9.89□□□□□ -0.83
SYNE3-205ENST00000557275 RNF40O75150 1001 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 DNAI1Q9UI46 699 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 C6orf50Q9HD87 102 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 LMNAP02545 664 aaKnown RBP9.88□□□□□ -0.83
SYNE3-205ENST00000557275 PHBP35232 272 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 KIFC2Q96AC6 838 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 CABS1Q96KC9 395 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 STX10O60499 249 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 SLC5A1P13866 664 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 NOX5Q96PH1 765 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 TTF2Q9UNY4 1162 aaKnown RBP9.88□□□□□ -0.83
SYNE3-205ENST00000557275 CCT6AP40227 531 aaKnown RBP9.88□□□□□ -0.83
SYNE3-205ENST00000557275 IARSP41252 1262 aaKnown RBP9.88□□□□□ -0.83
SYNE3-205ENST00000557275 GSTO1P78417 241 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 CXorf38Q8TB03 319 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 RAB17Q9H0T7 212 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 ZKSCAN5Q9Y2L8 839 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 CABP4P57796 275 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 KRBA2Q6ZNG9 492 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 EFHD1Q9BUP0 239 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 IDEP14735 1019 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 DENND2CQ68D51 928 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 MICAL1Q8TDZ2 1067 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 ERO1AQ96HE7 468 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 NAP1L4Q99733 375 aaKnown RBP9.88□□□□□ -0.83
SYNE3-205ENST00000557275 KRT23Q9C075 422 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 GFM2Q969S9 779 aaKnown RBP9.88□□□□□ -0.83
SYNE3-205ENST00000557275 ANKRD20A4Q4UJ75 823 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 ANKRD20A8PQ5CZ79 823 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 ANKRD20A2Q5SQ80 823 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 LIN9Q5TKA1 542 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 ANKRD20A1Q5TYW2 823 aa9.88□□□□□ -0.83
SYNE3-205ENST00000557275 PAK2Q13177 524 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 USP6NLQ92738 828 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 NUCKS1Q9H1E3 243 aaKnown RBP9.87□□□□□ -0.83
SYNE3-205ENST00000557275 C8orf74Q6P047 294 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 FAM204AQ9H8W3 233 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 HOMER3Q9NSC5 361 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 FRMD4BQ9Y2L6 1034 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 LDHCP07864 332 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 ARHGEF9O43307 516 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 HMOX1P09601 288 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 KLHL14Q9P2G3 628 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 TPCN1Q9ULQ1 816 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 SPECC1L-ADORA2AF8WAN1 911 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 CYB5RLQ6IPT4 315 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 TRIM42Q8IWZ5 723 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 AGTPBP1Q9UPW5 1226 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 KDM4AO75164 1064 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 FLIIQ13045 1269 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 NMIQ13287 307 aaPredicted RBP9.87□□□□□ -0.83
SYNE3-205ENST00000557275 ERICH3Q5RHP9 1530 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 NOP14P78316 857 aaKnown RBP9.87□□□□□ -0.83
SYNE3-205ENST00000557275 CCDC93Q567U6 631 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 NBPF6Q5VWK0 638 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 HAUS1Q96CS2 278 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 NBPF4Q96M43 638 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 CKAP2LQ8IYA6 745 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 KIFC3Q9BVG8 833 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 NUTM2DQ5VT03 806 aaPredicted RBP9.87□□□□□ -0.83
SYNE3-205ENST00000557275 NUTM2AQ8IVF1 878 aaPredicted RBP9.87□□□□□ -0.83
SYNE3-205ENST00000557275 PPP1R21Q6ZMI0 780 aa9.87□□□□□ -0.83
SYNE3-205ENST00000557275 EFCAB14O75071 495 aa9.86□□□□□ -0.83
SYNE3-205ENST00000557275 TEKT2Q9UIF3 430 aa9.86□□□□□ -0.83
SYNE3-205ENST00000557275 HOMEZQ8IX15 550 aa9.86□□□□□ -0.83
SYNE3-205ENST00000557275 NSMCE1Q8WV22 266 aa9.86□□□□□ -0.83
SYNE3-205ENST00000557275 CPLX3Q8WVH0 158 aa9.86□□□□□ -0.83
SYNE3-205ENST00000557275 PTPRCP08575 1304 aa9.86□□□□□ -0.83
SYNE3-205ENST00000557275 CDR2Q01850 454 aa9.86□□□□□ -0.83
SYNE3-205ENST00000557275 EP400NLQ6ZTU2 488 aa9.86□□□□□ -0.83
SYNE3-205ENST00000557275 ATP6V0A1Q93050 837 aa9.86□□□□□ -0.83
SYNE3-205ENST00000557275 CENPKQ9BS16 269 aa9.86□□□□□ -0.83
SYNE3-205ENST00000557275 MFSD6Q6ZSS7 791 aa9.86□□□□□ -0.83
SYNE3-205ENST00000557275 CCDC138Q96M89 665 aa9.86□□□□□ -0.83
SYNE3-205ENST00000557275 SIL1Q9H173 461 aa9.86□□□□□ -0.83
SYNE3-205ENST00000557275 OPHN1O60890 802 aa9.86□□□□□ -0.83
SYNE3-205ENST00000557275 TACO1Q9BSH4 297 aaKnown RBP9.86□□□□□ -0.83
SYNE3-205ENST00000557275 METAP2P50579 478 aaKnown RBP eCLIP9.86□□□□□ -0.83
SYNE3-205ENST00000557275 NLRP7Q8WX94 980 aa9.86□□□□□ -0.83
SYNE3-205ENST00000557275 FAM13AO94988 1023 aa9.86□□□□□ -0.83
SYNE3-205ENST00000557275 RPS6KA2Q15349 733 aa9.86□□□□□ -0.83
SYNE3-205ENST00000557275 NCOA7Q8NI08 942 aa9.86□□□□□ -0.83
SYNE3-205ENST00000557275 STAG1Q8WVM7 1258 aa9.86□□□□□ -0.83
SYNE3-205ENST00000557275 MED4Q9NPJ6 270 aa9.86□□□□□ -0.83
SYNE3-205ENST00000557275 DIABLOQ9NR28 239 aa9.86□□□□□ -0.83
SYNE3-205ENST00000557275 ELP1O95163 1332 aa9.86□□□□□ -0.83
SYNE3-205ENST00000557275 ARHGAP42A6NI28 874 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms