RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 SUCLG2Q96I99 432 aa20.07■□□□□ 0.8
TUBB3-213ENST00000557262 PAPPA2Q9BXP8 1791 aa20.06■□□□□ 0.8
TUBB3-213ENST00000557262 NBPF7P0C2Y1 421 aaPredicted RBP20.06■□□□□ 0.8
TUBB3-213ENST00000557262 MTMR14Q8NCE2 650 aa20.06■□□□□ 0.8
TUBB3-213ENST00000557262 KAZALD1Q96I82 304 aa20.06■□□□□ 0.8
TUBB3-213ENST00000557262 UTYO14607 1347 aa20.05■□□□□ 0.8
TUBB3-213ENST00000557262 E9PSI1 815 aa20.05■□□□□ 0.8
TUBB3-213ENST00000557262 UBE4AQ14139 1066 aa20.05■□□□□ 0.8
TUBB3-213ENST00000557262 ARMC9Q7Z3E5 817 aa20.05■□□□□ 0.8
TUBB3-213ENST00000557262 F8W031 263 aaPredicted RBP20.04■□□□□ 0.8
TUBB3-213ENST00000557262 PUS3Q9BZE2 481 aaKnown RBP20.04■□□□□ 0.8
TUBB3-213ENST00000557262 PTPRCP08575 1304 aa20.03■□□□□ 0.8
TUBB3-213ENST00000557262 TDRD7Q8NHU6 1098 aaKnown RBP20.03■□□□□ 0.8
TUBB3-213ENST00000557262 DEFB129Q9H1M3 183 aa20.03■□□□□ 0.8
TUBB3-213ENST00000557262 RIPOR2Q9Y4F9 1068 aa20.03■□□□□ 0.8
TUBB3-213ENST00000557262 MYO1BO43795 1136 aa20.02■□□□□ 0.8
TUBB3-213ENST00000557262 HIBADHP31937 336 aaKnown RBP20.02■□□□□ 0.8
TUBB3-213ENST00000557262 PTPN12Q05209 780 aaKnown RBP20.02■□□□□ 0.8
TUBB3-213ENST00000557262 SLFN5Q08AF3 891 aa20.02■□□□□ 0.8
TUBB3-213ENST00000557262 PRKG1Q13976 671 aa20.02■□□□□ 0.8
TUBB3-213ENST00000557262 RABL6Q3YEC7 729 aaPredicted RBP20.02■□□□□ 0.8
TUBB3-213ENST00000557262 CFAP100Q494V2 611 aa20.02■□□□□ 0.8
TUBB3-213ENST00000557262 FAM84BQ96KN1 310 aaPredicted RBP20.02■□□□□ 0.8
TUBB3-213ENST00000557262 BICC1Q9H694 974 aaKnown RBP20.02■□□□□ 0.8
TUBB3-213ENST00000557262 AKAP11Q9UKA4 1901 aa20.02■□□□□ 0.79
TUBB3-213ENST00000557262 FAM205AQ6ZU69 1335 aa20.02■□□□□ 0.79
TUBB3-213ENST00000557262 TM4SF4P48230 202 aa20.01■□□□□ 0.79
TUBB3-213ENST00000557262 LDLRAD1Q5T700 205 aa20.01■□□□□ 0.79
TUBB3-213ENST00000557262 SSH1Q8WYL5 1049 aa20.01■□□□□ 0.79
TUBB3-213ENST00000557262 PRMT6Q96LA8 375 aaPredicted RBP20.01■□□□□ 0.79
TUBB3-213ENST00000557262 JAG2Q9Y219 1238 aa20.01■□□□□ 0.79
TUBB3-213ENST00000557262 PCDHAC2Q9Y5I4 1007 aa20.01■□□□□ 0.79
TUBB3-213ENST00000557262 MROH5Q6ZUA9 1318 aa20.01■□□□□ 0.79
TUBB3-213ENST00000557262 SPDYE2BA6NHP3 402 aa20■□□□□ 0.79
TUBB3-213ENST00000557262 SPDYE6P0CI01 402 aa20■□□□□ 0.79
TUBB3-213ENST00000557262 GYG1P46976 350 aa20■□□□□ 0.79
TUBB3-213ENST00000557262 RGS19P49795 217 aa20■□□□□ 0.79
TUBB3-213ENST00000557262 RBM5P52756 815 aaKnown RBP eCLIP20■□□□□ 0.79
TUBB3-213ENST00000557262 ANGEL1Q9UNK9 670 aaKnown RBP20■□□□□ 0.79
TUBB3-213ENST00000557262 PPP2R3BQ9Y5P8 575 aa20■□□□□ 0.79
TUBB3-213ENST00000557262 A0A1B0GUL6 1792 aa19.99■□□□□ 0.79
TUBB3-213ENST00000557262 ANKRD44Q8N8A2 993 aa19.99■□□□□ 0.79
TUBB3-213ENST00000557262 USP44Q9H0E7 712 aa19.99■□□□□ 0.79
TUBB3-213ENST00000557262 COL1A1P02452 1464 aaPredicted RBP19.99■□□□□ 0.79
TUBB3-213ENST00000557262 CLRN2A0PK11 232 aa19.98■□□□□ 0.79
TUBB3-213ENST00000557262 PPP1R12BO60237 982 aaPredicted RBP19.98■□□□□ 0.79
TUBB3-213ENST00000557262 ALDH1L2Q3SY69 923 aa19.98■□□□□ 0.79
TUBB3-213ENST00000557262 SUPT20HL1Q3ZLR7 823 aa19.98■□□□□ 0.79
TUBB3-213ENST00000557262 MFSD14BQ5SR56 506 aa19.98■□□□□ 0.79
TUBB3-213ENST00000557262 MKRN3Q13064 507 aaKnown RBP19.97■□□□□ 0.79
TUBB3-213ENST00000557262 MAP3K11Q16584 847 aa19.97■□□□□ 0.79
TUBB3-213ENST00000557262 LRRC24Q50LG9 513 aa19.97■□□□□ 0.79
TUBB3-213ENST00000557262 FBXO33Q7Z6M2 555 aa19.97■□□□□ 0.79
TUBB3-213ENST00000557262 SLC10A4Q96EP9 437 aa19.97■□□□□ 0.79
TUBB3-213ENST00000557262 VEZTQ9HBM0 779 aa19.97■□□□□ 0.79
TUBB3-213ENST00000557262 TBC1D8O95759 1140 aa19.96■□□□□ 0.79
TUBB3-213ENST00000557262 SREBF2Q12772 1141 aa19.96■□□□□ 0.79
TUBB3-213ENST00000557262 METTL24Q5JXM2 366 aa19.96■□□□□ 0.79
TUBB3-213ENST00000557262 SPRYD7Q5W111 196 aa19.96■□□□□ 0.79
TUBB3-213ENST00000557262 VPS37DQ86XT2 251 aa19.96■□□□□ 0.79
TUBB3-213ENST00000557262 CDCA7LQ96GN5 454 aa19.96■□□□□ 0.79
TUBB3-213ENST00000557262 SERPINA10Q9UK55 444 aa19.96■□□□□ 0.79
TUBB3-213ENST00000557262 TTF2Q9UNY4 1162 aaKnown RBP19.96■□□□□ 0.79
TUBB3-213ENST00000557262 FZD1Q9UP38 647 aa19.96■□□□□ 0.79
TUBB3-213ENST00000557262 UNCXA6NJT0 531 aa19.95■□□□□ 0.78
TUBB3-213ENST00000557262 PDE8BO95263 885 aa19.95■□□□□ 0.78
TUBB3-213ENST00000557262 MLLT1Q03111 559 aaPredicted RBP19.95■□□□□ 0.78
TUBB3-213ENST00000557262 CAVIN4Q5BKX8 364 aa19.95■□□□□ 0.78
TUBB3-213ENST00000557262 CTU1Q7Z7A3 348 aaKnown RBP19.95■□□□□ 0.78
TUBB3-213ENST00000557262 TRMT2AQ8IZ69 625 aaKnown RBP19.95■□□□□ 0.78
TUBB3-213ENST00000557262 INHBEP58166 350 aa19.94■□□□□ 0.78
TUBB3-213ENST00000557262 RASA3Q14644 834 aa19.94■□□□□ 0.78
TUBB3-213ENST00000557262 NBPF12Q5TAG4 269 aaPredicted RBP19.94■□□□□ 0.78
TUBB3-213ENST00000557262 ZNF70Q9UC06 446 aaPredicted RBP19.94■□□□□ 0.78
TUBB3-213ENST00000557262 AOX1Q06278 1338 aa19.94■□□□□ 0.78
TUBB3-213ENST00000557262 FRAT2O75474 233 aaPredicted RBP19.93■□□□□ 0.78
TUBB3-213ENST00000557262 TNFAIP1Q13829 316 aa19.93■□□□□ 0.78
TUBB3-213ENST00000557262 SPDYE2Q495Y8 402 aa19.93■□□□□ 0.78
TUBB3-213ENST00000557262 NOM1Q5C9Z4 860 aaKnown RBP19.93■□□□□ 0.78
TUBB3-213ENST00000557262 DZIP1LQ8IYY4 767 aaKnown RBP19.93■□□□□ 0.78
TUBB3-213ENST00000557262 VGLL2Q8N8G2 317 aa19.93■□□□□ 0.78
TUBB3-213ENST00000557262 KLHDC4Q8TBB5 520 aa19.93■□□□□ 0.78
TUBB3-213ENST00000557262 ZNF296Q8WUU4 475 aaPredicted RBP19.93■□□□□ 0.78
TUBB3-213ENST00000557262 TDRD3Q9H7E2 651 aaKnown RBP19.93■□□□□ 0.78
TUBB3-213ENST00000557262 MANSC4A6NHS7 340 aaPredicted RBP19.92■□□□□ 0.78
TUBB3-213ENST00000557262 GPR25O00155 361 aa19.92■□□□□ 0.78
TUBB3-213ENST00000557262 USP2O75604 605 aaPredicted RBP19.92■□□□□ 0.78
TUBB3-213ENST00000557262 IREB2P48200 963 aaKnown RBP19.92■□□□□ 0.78
TUBB3-213ENST00000557262 TBC1D22AQ8WUA7 517 aa19.92■□□□□ 0.78
TUBB3-213ENST00000557262 SMC4Q9NTJ3 1288 aa19.92■□□□□ 0.78
TUBB3-213ENST00000557262 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.92■□□□□ 0.78
TUBB3-213ENST00000557262 IQSEC3Q9UPP2 1182 aaPredicted RBP19.92■□□□□ 0.78
TUBB3-213ENST00000557262 ALDH1A1P00352 501 aa19.91■□□□□ 0.78
TUBB3-213ENST00000557262 CT47B1P0C2W7 299 aaPredicted RBP19.91■□□□□ 0.78
TUBB3-213ENST00000557262 ZBTB48P10074 688 aaPredicted RBP19.91■□□□□ 0.78
TUBB3-213ENST00000557262 CRKP46108 304 aa19.91■□□□□ 0.78
TUBB3-213ENST00000557262 BCAMP50895 628 aa19.91■□□□□ 0.78
TUBB3-213ENST00000557262 HDLBPQ00341 1268 aaKnown RBP19.91■□□□□ 0.78
TUBB3-213ENST00000557262 CLMNQ96JQ2 1002 aa19.91■□□□□ 0.78
TUBB3-213ENST00000557262 CFHR5Q9BXR6 569 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms