RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 JARID2Q92833 1246 aaPredicted RBP16.39■□□□□ 0.21
PSEN1-220ENST00000557037 CHPF2Q9P2E5 772 aa16.39■□□□□ 0.21
PSEN1-220ENST00000557037 BIN2Q9UBW5 565 aaPredicted RBP16.39■□□□□ 0.21
PSEN1-220ENST00000557037 PPP2R3BQ9Y5P8 575 aa16.39■□□□□ 0.21
PSEN1-220ENST00000557037 GRK4P32298 578 aa16.38■□□□□ 0.21
PSEN1-220ENST00000557037 PRMT2P55345 433 aa16.38■□□□□ 0.21
PSEN1-220ENST00000557037 NFE2L2Q16236 605 aa16.38■□□□□ 0.21
PSEN1-220ENST00000557037 TXNRD3Q86VQ6 643 aa16.38■□□□□ 0.21
PSEN1-220ENST00000557037 AOX1Q06278 1338 aa16.38■□□□□ 0.21
PSEN1-220ENST00000557037 TLR2O60603 784 aa16.37■□□□□ 0.21
PSEN1-220ENST00000557037 GNRH1P01148 92 aa16.37■□□□□ 0.21
PSEN1-220ENST00000557037 CTGFP29279 349 aa16.37■□□□□ 0.21
PSEN1-220ENST00000557037 MMP14P50281 582 aa16.37■□□□□ 0.21
PSEN1-220ENST00000557037 GTF2A2P52657 109 aa16.37■□□□□ 0.21
PSEN1-220ENST00000557037 GTF2IP78347 998 aa16.37■□□□□ 0.21
PSEN1-220ENST00000557037 RAET1EQ8TD07 263 aa16.37■□□□□ 0.21
PSEN1-220ENST00000557037 U2AF1L4Q8WU68 220 aaKnown RBP16.37■□□□□ 0.21
PSEN1-220ENST00000557037 COA1Q9GZY4 146 aa16.37■□□□□ 0.21
PSEN1-220ENST00000557037 SRRDQ9UH36 339 aa16.37■□□□□ 0.21
PSEN1-220ENST00000557037 RIPOR2Q9Y4F9 1068 aa16.37■□□□□ 0.21
PSEN1-220ENST00000557037 ZNF804BA4D1E1 1349 aa16.37■□□□□ 0.21
PSEN1-220ENST00000557037 OTOFQ9HC10 1997 aa16.37■□□□□ 0.21
PSEN1-220ENST00000557037 WDHD1O75717 1129 aaPredicted RBP16.36■□□□□ 0.21
PSEN1-220ENST00000557037 PSMC4P43686 418 aa16.36■□□□□ 0.21
PSEN1-220ENST00000557037 BCAMP50895 628 aa16.36■□□□□ 0.21
PSEN1-220ENST00000557037 KRT24Q2M2I5 525 aa16.36■□□□□ 0.21
PSEN1-220ENST00000557037 F8W031 263 aaPredicted RBP16.35■□□□□ 0.21
PSEN1-220ENST00000557037 KLRK1P26718 216 aa16.35■□□□□ 0.21
PSEN1-220ENST00000557037 PPP2R1AP30153 589 aa16.35■□□□□ 0.21
PSEN1-220ENST00000557037 RASA3Q14644 834 aa16.35■□□□□ 0.21
PSEN1-220ENST00000557037 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.35■□□□□ 0.21
PSEN1-220ENST00000557037 ZBTB38Q8NAP3 1195 aaPredicted RBP16.35■□□□□ 0.21
PSEN1-220ENST00000557037 TRIM47Q96LD4 638 aa16.35■□□□□ 0.21
PSEN1-220ENST00000557037 GDF15Q99988 308 aa16.35■□□□□ 0.21
PSEN1-220ENST00000557037 UNC93B1Q9H1C4 597 aa16.35■□□□□ 0.21
PSEN1-220ENST00000557037 ZMYND8Q9ULU4 1186 aaPredicted RBP16.35■□□□□ 0.21
PSEN1-220ENST00000557037 FMNL1O95466 1100 aaPredicted RBP16.34■□□□□ 0.21
PSEN1-220ENST00000557037 OSBPP22059 807 aa16.34■□□□□ 0.21
PSEN1-220ENST00000557037 CCT4P50991 539 aaKnown RBP16.34■□□□□ 0.21
PSEN1-220ENST00000557037 CFAP100Q494V2 611 aa16.34■□□□□ 0.21
PSEN1-220ENST00000557037 PRMT6Q96LA8 375 aaPredicted RBP16.34■□□□□ 0.21
PSEN1-220ENST00000557037 MINPP1Q9UNW1 487 aa16.34■□□□□ 0.21
PSEN1-220ENST00000557037 BTBD19C9JJ37 291 aa16.33■□□□□ 0.2
PSEN1-220ENST00000557037 MYO1BO43795 1136 aa16.33■□□□□ 0.2
PSEN1-220ENST00000557037 BMP8BP34820 402 aa16.33■□□□□ 0.2
PSEN1-220ENST00000557037 UBXN2AP68543 259 aa16.33■□□□□ 0.2
PSEN1-220ENST00000557037 TRIM28Q13263 835 aaKnown RBP16.33■□□□□ 0.2
PSEN1-220ENST00000557037 VGLL4Q14135 290 aa16.33■□□□□ 0.2
PSEN1-220ENST00000557037 CDAN1Q8IWY9 1227 aa16.33■□□□□ 0.2
PSEN1-220ENST00000557037 CERS5Q8N5B7 392 aa16.33■□□□□ 0.2
PSEN1-220ENST00000557037 CPA4Q9UI42 421 aa16.33■□□□□ 0.2
PSEN1-220ENST00000557037 MYPNQ86TC9 1320 aa16.33■□□□□ 0.2
PSEN1-220ENST00000557037 SPDYE2BA6NHP3 402 aa16.32■□□□□ 0.2
PSEN1-220ENST00000557037 PDE8AO60658 829 aa16.32■□□□□ 0.2
PSEN1-220ENST00000557037 SGPL1O95470 568 aa16.32■□□□□ 0.2
PSEN1-220ENST00000557037 TFRCP02786 760 aaKnown RBP16.32■□□□□ 0.2
PSEN1-220ENST00000557037 SPDYE6P0CI01 402 aa16.32■□□□□ 0.2
PSEN1-220ENST00000557037 VCANP13611 3396 aa16.32■□□□□ 0.2
PSEN1-220ENST00000557037 HSP90B1P14625 803 aaKnown RBP16.32■□□□□ 0.2
PSEN1-220ENST00000557037 COL9A1P20849 921 aa16.32■□□□□ 0.2
PSEN1-220ENST00000557037 LRIT3Q3SXY7 679 aa16.32■□□□□ 0.2
PSEN1-220ENST00000557037 C7orf61Q8IZ16 206 aa16.32■□□□□ 0.2
PSEN1-220ENST00000557037 RPTORQ8N122 1335 aa16.32■□□□□ 0.2
PSEN1-220ENST00000557037 MTMR14Q8NCE2 650 aa16.32■□□□□ 0.2
PSEN1-220ENST00000557037 PLEKHF1Q96S99 279 aa16.32■□□□□ 0.2
PSEN1-220ENST00000557037 ALPK3Q96L96 1907 aa16.31■□□□□ 0.2
PSEN1-220ENST00000557037 HOXD10P28358 340 aa16.31■□□□□ 0.2
PSEN1-220ENST00000557037 MAP3K9P80192 1104 aa16.31■□□□□ 0.2
PSEN1-220ENST00000557037 RAPGEFL1Q9UHV5 662 aa16.31■□□□□ 0.2
PSEN1-220ENST00000557037 CETPP11597 493 aa16.3■□□□□ 0.2
PSEN1-220ENST00000557037 HDGFL1Q5TGJ6 251 aa16.3■□□□□ 0.2
PSEN1-220ENST00000557037 C17orf99Q6UX52 265 aa16.3■□□□□ 0.2
PSEN1-220ENST00000557037 PAWRQ96IZ0 340 aaKnown RBP16.3■□□□□ 0.2
PSEN1-220ENST00000557037 CDC5LQ99459 802 aaKnown RBP16.3■□□□□ 0.2
PSEN1-220ENST00000557037 CSADQ9Y600 493 aa16.3■□□□□ 0.2
PSEN1-220ENST00000557037 SPTBN5Q9NRC6 3674 aaKnown RBP16.3■□□□□ 0.2
PSEN1-220ENST00000557037 ECM29Q5VYK3 1845 aa16.3■□□□□ 0.2
PSEN1-220ENST00000557037 SPEF2Q9C093 1822 aa16.3■□□□□ 0.2
PSEN1-220ENST00000557037 SYN1P17600 705 aa16.29■□□□□ 0.2
PSEN1-220ENST00000557037 MAGEA10P43363 369 aaPredicted RBP16.29■□□□□ 0.2
PSEN1-220ENST00000557037 RBM5P52756 815 aaKnown RBP eCLIP16.29■□□□□ 0.2
PSEN1-220ENST00000557037 PRKCZQ05513 592 aa16.29■□□□□ 0.2
PSEN1-220ENST00000557037 TDHQ8IZJ6 230 aa16.29■□□□□ 0.2
PSEN1-220ENST00000557037 GUCD1Q96NT3 240 aa16.29■□□□□ 0.2
PSEN1-220ENST00000557037 DEFB118Q96PH6 123 aa16.29■□□□□ 0.2
PSEN1-220ENST00000557037 BSDC1Q9NW68 430 aaPredicted RBP16.29■□□□□ 0.2
PSEN1-220ENST00000557037 MAPK8IP3Q9UPT6 1336 aa16.28■□□□□ 0.2
PSEN1-220ENST00000557037 IRS2Q9Y4H2 1338 aa16.28■□□□□ 0.2
PSEN1-220ENST00000557037 PCCAP05165 728 aaPredicted RBP16.28■□□□□ 0.2
PSEN1-220ENST00000557037 RIC3Q7Z5B4 369 aa16.28■□□□□ 0.2
PSEN1-220ENST00000557037 DIS3LQ8TF46 1054 aaKnown RBP16.28■□□□□ 0.2
PSEN1-220ENST00000557037 FAM161BQ96MY7 647 aa16.28■□□□□ 0.2
PSEN1-220ENST00000557037 MYD88Q99836 296 aa16.28■□□□□ 0.2
PSEN1-220ENST00000557037 JAG2Q9Y219 1238 aa16.28■□□□□ 0.2
PSEN1-220ENST00000557037 LEMD3Q9Y2U8 911 aa16.28■□□□□ 0.2
PSEN1-220ENST00000557037 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.27■□□□□ 0.2
PSEN1-220ENST00000557037 TEPSINQ96N21 525 aa16.27■□□□□ 0.2
PSEN1-220ENST00000557037 ZCCHC17Q9NP64 241 aaKnown RBP16.27■□□□□ 0.2
PSEN1-220ENST00000557037 SPDYE5A6NIY4 337 aa16.26■□□□□ 0.19
PSEN1-220ENST00000557037 IRF6O14896 467 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms