RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 TSR2Q969E8 191 aaKnown RBP11.58□□□□□ -0.56
HNRNPC-227ENST00000556897 STK31Q9BXU1 1019 aa11.58□□□□□ -0.56
HNRNPC-227ENST00000556897 CD209Q9NNX6 404 aa11.58□□□□□ -0.56
HNRNPC-227ENST00000556897 PCDHAC2Q9Y5I4 1007 aa11.58□□□□□ -0.56
HNRNPC-227ENST00000556897 SSC5DA1L4H1 1573 aa11.58□□□□□ -0.56
HNRNPC-227ENST00000556897 COL1A1P02452 1464 aaPredicted RBP11.57□□□□□ -0.56
HNRNPC-227ENST00000556897 F8W031 263 aaPredicted RBP11.57□□□□□ -0.56
HNRNPC-227ENST00000556897 SNAP23O00161 211 aa11.57□□□□□ -0.56
HNRNPC-227ENST00000556897 ZBTB48P10074 688 aaPredicted RBP11.57□□□□□ -0.56
HNRNPC-227ENST00000556897 INHBEP58166 350 aa11.57□□□□□ -0.56
HNRNPC-227ENST00000556897 CHRNDQ07001 517 aa11.57□□□□□ -0.56
HNRNPC-227ENST00000556897 GCKRQ14397 625 aa11.57□□□□□ -0.56
HNRNPC-227ENST00000556897 MAP3K11Q16584 847 aa11.57□□□□□ -0.56
HNRNPC-227ENST00000556897 G2E3Q7L622 706 aa11.57□□□□□ -0.56
HNRNPC-227ENST00000556897 GCC1Q96CN9 775 aa11.57□□□□□ -0.56
HNRNPC-227ENST00000556897 WNK4Q96J92 1243 aa11.57□□□□□ -0.56
HNRNPC-227ENST00000556897 PLA2G12BQ9BX93 195 aa11.57□□□□□ -0.56
HNRNPC-227ENST00000556897 CLRN2A0PK11 232 aa11.56□□□□□ -0.56
HNRNPC-227ENST00000556897 PPP1R12BO60237 982 aaPredicted RBP11.56□□□□□ -0.56
HNRNPC-227ENST00000556897 SPDYE2BA6NHP3 402 aa11.55□□□□□ -0.56
HNRNPC-227ENST00000556897 MYO1BO43795 1136 aa11.55□□□□□ -0.56
HNRNPC-227ENST00000556897 TAF5LO75529 589 aa11.55□□□□□ -0.56
HNRNPC-227ENST00000556897 CSF1RP07333 972 aa11.55□□□□□ -0.56
HNRNPC-227ENST00000556897 SPDYE6P0CI01 402 aa11.55□□□□□ -0.56
HNRNPC-227ENST00000556897 CASP7P55210 303 aa11.55□□□□□ -0.56
HNRNPC-227ENST00000556897 CRHR2Q13324 411 aa11.55□□□□□ -0.56
HNRNPC-227ENST00000556897 SUPT20HL1Q3ZLR7 823 aa11.55□□□□□ -0.56
HNRNPC-227ENST00000556897 CFAP100Q494V2 611 aa11.55□□□□□ -0.56
HNRNPC-227ENST00000556897 NBPF12Q5TAG4 269 aaPredicted RBP11.55□□□□□ -0.56
HNRNPC-227ENST00000556897 INTS3Q68E01 1043 aaKnown RBP11.55□□□□□ -0.56
HNRNPC-227ENST00000556897 MTMR14Q8NCE2 650 aa11.55□□□□□ -0.56
HNRNPC-227ENST00000556897 HELBQ8NG08 1087 aaPredicted RBP11.55□□□□□ -0.56
HNRNPC-227ENST00000556897 PRMT6Q96LA8 375 aaPredicted RBP11.55□□□□□ -0.56
HNRNPC-227ENST00000556897 PRKRIP1Q9H875 184 aaPredicted RBP11.55□□□□□ -0.56
HNRNPC-227ENST00000556897 VEZTQ9HBM0 779 aa11.55□□□□□ -0.56
HNRNPC-227ENST00000556897 JAG2Q9Y219 1238 aa11.55□□□□□ -0.56
HNRNPC-227ENST00000556897 PTPN22Q9Y2R2 807 aa11.55□□□□□ -0.56
HNRNPC-227ENST00000556897 PPP2R3BQ9Y5P8 575 aa11.55□□□□□ -0.56
HNRNPC-227ENST00000556897 AOX1Q06278 1338 aa11.55□□□□□ -0.56
HNRNPC-227ENST00000556897 IRS2Q9Y4H2 1338 aa11.55□□□□□ -0.56
HNRNPC-227ENST00000556897 ANKRD18BA2A2Z9 1011 aa11.54□□□□□ -0.56
HNRNPC-227ENST00000556897 GJA5P36382 358 aa11.54□□□□□ -0.56
HNRNPC-227ENST00000556897 TWISTNBQ3B726 338 aaPredicted RBP11.54□□□□□ -0.56
HNRNPC-227ENST00000556897 HABP4Q5JVS0 413 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-227ENST00000556897 CD99L2Q8TCZ2 262 aa11.54□□□□□ -0.56
HNRNPC-227ENST00000556897 ERO1AQ96HE7 468 aa11.54□□□□□ -0.56
HNRNPC-227ENST00000556897 UNCXA6NJT0 531 aa11.53□□□□□ -0.56
HNRNPC-227ENST00000556897 USP2O75604 605 aaPredicted RBP11.53□□□□□ -0.56
HNRNPC-227ENST00000556897 IL1R1P14778 569 aa11.53□□□□□ -0.56
HNRNPC-227ENST00000556897 IREB2P48200 963 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-227ENST00000556897 RBM5P52756 815 aaKnown RBP eCLIP11.53□□□□□ -0.56
HNRNPC-227ENST00000556897 CAP1Q01518 475 aa11.53□□□□□ -0.56
HNRNPC-227ENST00000556897 FLIIQ13045 1269 aa11.53□□□□□ -0.56
HNRNPC-227ENST00000556897 RASA3Q14644 834 aa11.53□□□□□ -0.56
HNRNPC-227ENST00000556897 OTUD7BQ6GQQ9 843 aa11.53□□□□□ -0.56
HNRNPC-227ENST00000556897 C15orf52Q6ZUT6 534 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-227ENST00000556897 LINS1Q8NG48 757 aa11.53□□□□□ -0.56
HNRNPC-227ENST00000556897 DNAAF4Q8WXU2 420 aa11.53□□□□□ -0.56
HNRNPC-227ENST00000556897 PTPN18Q99952 460 aa11.53□□□□□ -0.56
HNRNPC-227ENST00000556897 MYH16Q9H6N6 1097 aa11.53□□□□□ -0.56
HNRNPC-227ENST00000556897 EN2P19622 333 aaPredicted RBP11.52□□□□□ -0.57
HNRNPC-227ENST00000556897 SP3Q02447 781 aa11.52□□□□□ -0.57
HNRNPC-227ENST00000556897 IFIT5Q13325 482 aaKnown RBP11.52□□□□□ -0.57
HNRNPC-227ENST00000556897 FKBP5Q13451 457 aaPredicted RBP11.52□□□□□ -0.57
HNRNPC-227ENST00000556897 ZNF804AQ7Z570 1209 aa11.52□□□□□ -0.57
HNRNPC-227ENST00000556897 ANKRD13AQ8IZ07 590 aa11.52□□□□□ -0.57
HNRNPC-227ENST00000556897 ARMC5Q96C12 935 aa11.52□□□□□ -0.57
HNRNPC-227ENST00000556897 EFCC1Q9HA90 598 aa11.52□□□□□ -0.57
HNRNPC-227ENST00000556897 CHMP3Q9Y3E7 222 aa11.52□□□□□ -0.57
HNRNPC-227ENST00000556897 LAMB1P07942 1786 aa11.51□□□□□ -0.57
HNRNPC-227ENST00000556897 ECM29Q5VYK3 1845 aa11.51□□□□□ -0.57
HNRNPC-227ENST00000556897 FKBP1AP62942 108 aaKnown RBP11.51□□□□□ -0.57
HNRNPC-227ENST00000556897 FOXO4P98177 505 aa11.51□□□□□ -0.57
HNRNPC-227ENST00000556897 OPTNQ96CV9 577 aa11.51□□□□□ -0.57
HNRNPC-227ENST00000556897 ELP3Q9H9T3 547 aa11.51□□□□□ -0.57
HNRNPC-227ENST00000556897 CEP290O15078 2479 aa11.51□□□□□ -0.57
HNRNPC-227ENST00000556897 RBBP6Q7Z6E9 1792 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-227ENST00000556897 TESPA1A2RU30 521 aaPredicted RBP11.5□□□□□ -0.57
HNRNPC-227ENST00000556897 CDAN1Q8IWY9 1227 aa11.5□□□□□ -0.57
HNRNPC-227ENST00000556897 WWC1Q8IX03 1113 aa11.5□□□□□ -0.57
HNRNPC-227ENST00000556897 ZNF594Q96JF6 807 aaPredicted RBP11.5□□□□□ -0.57
HNRNPC-227ENST00000556897 MS4A4AQ96JQ5 239 aa11.5□□□□□ -0.57
HNRNPC-227ENST00000556897 PLIN1O60240 522 aa11.49□□□□□ -0.57
HNRNPC-227ENST00000556897 TNFAIP1Q13829 316 aa11.49□□□□□ -0.57
HNRNPC-227ENST00000556897 SPDYE2Q495Y8 402 aa11.49□□□□□ -0.57
HNRNPC-227ENST00000556897 MFSD14BQ5SR56 506 aa11.49□□□□□ -0.57
HNRNPC-227ENST00000556897 ZNF333Q96JL9 665 aa11.49□□□□□ -0.57
HNRNPC-227ENST00000556897 TDRD3Q9H7E2 651 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-227ENST00000556897 ZNF70Q9UC06 446 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-227ENST00000556897 TTF2Q9UNY4 1162 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-227ENST00000556897 A0A1B0GUL6 1792 aa11.49□□□□□ -0.57
HNRNPC-227ENST00000556897 OTOFQ9HC10 1997 aa11.48□□□□□ -0.57
HNRNPC-227ENST00000556897 F6X3S4 739 aa11.48□□□□□ -0.57
HNRNPC-227ENST00000556897 FXR1P51114 621 aaKnown RBP eCLIP11.48□□□□□ -0.57
HNRNPC-227ENST00000556897 VGLL4Q14135 290 aa11.48□□□□□ -0.57
HNRNPC-227ENST00000556897 CCDC27Q2M243 656 aa11.48□□□□□ -0.57
HNRNPC-227ENST00000556897 CCDC57Q2TAC2 916 aa11.48□□□□□ -0.57
HNRNPC-227ENST00000556897 TAF7LQ5H9L4 462 aa11.48□□□□□ -0.57
HNRNPC-227ENST00000556897 EPHA10Q5JZY3 1008 aa11.48□□□□□ -0.57
HNRNPC-227ENST00000556897 LMBR1LQ6UX01 489 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 1106.9 ms