RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 MTX1Q13505 466 aa12.92□□□□□ -0.34
SNX6-208ENST00000556712 SCARF1Q14162 830 aa12.92□□□□□ -0.34
SNX6-208ENST00000556712 ANGEL2Q5VTE6 544 aaKnown RBP12.92□□□□□ -0.34
SNX6-208ENST00000556712 COPRSQ9NQ92 184 aa12.92□□□□□ -0.34
SNX6-208ENST00000556712 ABT1Q9ULW3 272 aaKnown RBP12.92□□□□□ -0.34
SNX6-208ENST00000556712 HDAC5Q9UQL6 1122 aa12.92□□□□□ -0.34
SNX6-208ENST00000556712 PCDHAC2Q9Y5I4 1007 aa12.92□□□□□ -0.34
SNX6-208ENST00000556712 CNTNAP1P78357 1384 aa12.92□□□□□ -0.34
SNX6-208ENST00000556712 CELF2O95319 508 aaKnown RBP12.91□□□□□ -0.34
SNX6-208ENST00000556712 BCAMP50895 628 aa12.91□□□□□ -0.34
SNX6-208ENST00000556712 CHAF1AQ13111 956 aaPredicted RBP12.91□□□□□ -0.34
SNX6-208ENST00000556712 ATP2B3Q16720 1220 aa12.91□□□□□ -0.34
SNX6-208ENST00000556712 NBPF9Q3BBW0 867 aa12.91□□□□□ -0.34
SNX6-208ENST00000556712 CST9Q5W186 159 aa12.91□□□□□ -0.34
SNX6-208ENST00000556712 CDC37L1Q7L3B6 337 aa12.91□□□□□ -0.34
SNX6-208ENST00000556712 KRT26Q7Z3Y9 468 aa12.91□□□□□ -0.34
SNX6-208ENST00000556712 FBXO33Q7Z6M2 555 aa12.91□□□□□ -0.34
SNX6-208ENST00000556712 VPS37DQ86XT2 251 aa12.91□□□□□ -0.34
SNX6-208ENST00000556712 TDRD7Q8NHU6 1098 aaKnown RBP12.91□□□□□ -0.34
SNX6-208ENST00000556712 DCPSQ96C86 337 aaKnown RBP12.91□□□□□ -0.34
SNX6-208ENST00000556712 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.91□□□□□ -0.34
SNX6-208ENST00000556712 WNT10BO00744 389 aa12.9□□□□□ -0.34
SNX6-208ENST00000556712 IFIT1P09914 478 aaKnown RBP12.9□□□□□ -0.34
SNX6-208ENST00000556712 SLC5A1P13866 664 aa12.9□□□□□ -0.34
SNX6-208ENST00000556712 IL15P40933 162 aaPredicted RBP12.9□□□□□ -0.34
SNX6-208ENST00000556712 MAPK8IP2Q13387 824 aaPredicted RBP12.9□□□□□ -0.34
SNX6-208ENST00000556712 GRIK5Q16478 980 aa12.9□□□□□ -0.34
SNX6-208ENST00000556712 MFSD14BQ5SR56 506 aa12.9□□□□□ -0.34
SNX6-208ENST00000556712 OGFOD1Q8N543 542 aa12.9□□□□□ -0.34
SNX6-208ENST00000556712 CEP126Q9P2H0 1117 aa12.9□□□□□ -0.34
SNX6-208ENST00000556712 THSD7BQ9C0I4 1608 aa12.9□□□□□ -0.34
SNX6-208ENST00000556712 FAM205AQ6ZU69 1335 aa12.89□□□□□ -0.35
SNX6-208ENST00000556712 ZBTB7BO15156 539 aaPredicted RBP12.89□□□□□ -0.35
SNX6-208ENST00000556712 ADORA1P30542 326 aa12.89□□□□□ -0.35
SNX6-208ENST00000556712 TFCP2Q12800 502 aa12.89□□□□□ -0.35
SNX6-208ENST00000556712 CAVIN4Q5BKX8 364 aa12.89□□□□□ -0.35
SNX6-208ENST00000556712 LPIN2Q92539 896 aa12.89□□□□□ -0.35
SNX6-208ENST00000556712 FBXO3Q9UK99 471 aa12.89□□□□□ -0.35
SNX6-208ENST00000556712 HDAC9Q9UKV0 1011 aa12.89□□□□□ -0.35
SNX6-208ENST00000556712 AOX1Q06278 1338 aa12.88□□□□□ -0.35
SNX6-208ENST00000556712 FRAT2O75474 233 aaPredicted RBP12.88□□□□□ -0.35
SNX6-208ENST00000556712 FKBP1AP62942 108 aaKnown RBP12.88□□□□□ -0.35
SNX6-208ENST00000556712 CFAP100Q494V2 611 aa12.88□□□□□ -0.35
SNX6-208ENST00000556712 C20orf194Q5TEA3 1177 aa12.88□□□□□ -0.35
SNX6-208ENST00000556712 PAXIP1Q6ZW49 1069 aaPredicted RBP12.88□□□□□ -0.35
SNX6-208ENST00000556712 SULF1Q8IWU6 871 aa12.88□□□□□ -0.35
SNX6-208ENST00000556712 JMYQ8N9B5 988 aa12.88□□□□□ -0.35
SNX6-208ENST00000556712 CDCA5Q96FF9 252 aa12.88□□□□□ -0.35
SNX6-208ENST00000556712 COG6Q9Y2V7 657 aa12.88□□□□□ -0.35
SNX6-208ENST00000556712 RASSF10A6NK89 507 aa12.87□□□□□ -0.35
SNX6-208ENST00000556712 PHKA1P46020 1223 aa12.87□□□□□ -0.35
SNX6-208ENST00000556712 VEGFBP49765 207 aa12.87□□□□□ -0.35
SNX6-208ENST00000556712 GRM1Q13255 1194 aa12.87□□□□□ -0.35
SNX6-208ENST00000556712 POLA2Q14181 598 aa12.87□□□□□ -0.35
SNX6-208ENST00000556712 ZBED3Q96IU2 234 aaPredicted RBP12.87□□□□□ -0.35
SNX6-208ENST00000556712 TTF2Q9UNY4 1162 aaKnown RBP12.87□□□□□ -0.35
SNX6-208ENST00000556712 TLL2Q9Y6L7 1015 aa12.87□□□□□ -0.35
SNX6-208ENST00000556712 PITPNM2Q9BZ72 1349 aa12.87□□□□□ -0.35
SNX6-208ENST00000556712 PAPPA2Q9BXP8 1791 aa12.86□□□□□ -0.35
SNX6-208ENST00000556712 TIMM10P62072 90 aa12.86□□□□□ -0.35
SNX6-208ENST00000556712 ATP8B2P98198 1209 aa12.86□□□□□ -0.35
SNX6-208ENST00000556712 MVPQ14764 893 aaKnown RBP12.86□□□□□ -0.35
SNX6-208ENST00000556712 DLGAP5Q15398 846 aa12.86□□□□□ -0.35
SNX6-208ENST00000556712 DEFB115Q30KQ5 88 aa12.86□□□□□ -0.35
SNX6-208ENST00000556712 PRAMEF18Q5VWM3 479 aa12.86□□□□□ -0.35
SNX6-208ENST00000556712 CYP4F22Q6NT55 531 aa12.86□□□□□ -0.35
SNX6-208ENST00000556712 CEP85Q6P2H3 762 aa12.86□□□□□ -0.35
SNX6-208ENST00000556712 A0A1B0GUL7 405 aa12.85□□□□□ -0.35
SNX6-208ENST00000556712 CLRN2A0PK11 232 aa12.85□□□□□ -0.35
SNX6-208ENST00000556712 SPDYE2BA6NHP3 402 aa12.85□□□□□ -0.35
SNX6-208ENST00000556712 SPDYE6P0CI01 402 aa12.85□□□□□ -0.35
SNX6-208ENST00000556712 RBM5P52756 815 aaKnown RBP eCLIP12.85□□□□□ -0.35
SNX6-208ENST00000556712 SAPCD2Q86UD0 394 aa12.85□□□□□ -0.35
SNX6-208ENST00000556712 SSH3Q8TE77 659 aa12.85□□□□□ -0.35
SNX6-208ENST00000556712 MS4A1P11836 297 aa12.84□□□□□ -0.35
SNX6-208ENST00000556712 G3BP1Q13283 466 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNX6-208ENST00000556712 OS9Q13438 667 aaPredicted RBP12.84□□□□□ -0.35
SNX6-208ENST00000556712 CCDC102BQ68D86 513 aa12.84□□□□□ -0.35
SNX6-208ENST00000556712 MTMR14Q8NCE2 650 aa12.84□□□□□ -0.35
SNX6-208ENST00000556712 PRMT6Q96LA8 375 aaPredicted RBP12.84□□□□□ -0.35
SNX6-208ENST00000556712 GBA2Q9HCG7 927 aaPredicted RBP12.84□□□□□ -0.35
SNX6-208ENST00000556712 SSC5DA1L4H1 1573 aa12.84□□□□□ -0.35
SNX6-208ENST00000556712 WDR33Q9C0J8 1336 aaKnown RBP12.84□□□□□ -0.35
SNX6-208ENST00000556712 SURF6O75683 361 aaKnown RBP12.83□□□□□ -0.36
SNX6-208ENST00000556712 HSPA1AP0DMV8 641 aaKnown RBP12.83□□□□□ -0.36
SNX6-208ENST00000556712 HSPA1BP0DMV9 641 aaKnown RBP12.83□□□□□ -0.36
SNX6-208ENST00000556712 MMP14P50281 582 aa12.83□□□□□ -0.36
SNX6-208ENST00000556712 HUNKP57058 714 aa12.83□□□□□ -0.36
SNX6-208ENST00000556712 RASGRF1Q13972 1273 aa12.83□□□□□ -0.36
SNX6-208ENST00000556712 MOB2Q70IA6 237 aa12.83□□□□□ -0.36
SNX6-208ENST00000556712 APOBEC3FQ8IUX4 373 aaKnown RBP12.83□□□□□ -0.36
SNX6-208ENST00000556712 TBC1D22AQ8WUA7 517 aa12.83□□□□□ -0.36
SNX6-208ENST00000556712 XAGE2Q96GT9 111 aa12.83□□□□□ -0.36
SNX6-208ENST00000556712 CAPNS2Q96L46 248 aa12.83□□□□□ -0.36
SNX6-208ENST00000556712 NEUROD6Q96NK8 337 aa12.83□□□□□ -0.36
SNX6-208ENST00000556712 VEZTQ9HBM0 779 aa12.83□□□□□ -0.36
SNX6-208ENST00000556712 DDX19BQ9UMR2 479 aa12.83□□□□□ -0.36
SNX6-208ENST00000556712 MYH2Q9UKX2 1941 aa12.82□□□□□ -0.36
SNX6-208ENST00000556712 OTOFQ9HC10 1997 aa12.82□□□□□ -0.36
SNX6-208ENST00000556712 AOC2O75106 756 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms