RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 GALNT11Q8NCW6 608 aa7.37□□□□□ -1.23
ATXN3-243ENST00000556671 GGNBP2Q9H3C7 697 aa7.37□□□□□ -1.23
ATXN3-243ENST00000556671 SALL4Q9UJQ4 1053 aa7.37□□□□□ -1.23
ATXN3-243ENST00000556671 ABCA8O94911 1581 aa7.37□□□□□ -1.23
ATXN3-243ENST00000556671 SCO2A0A1W2PP80 73 aa7.36□□□□□ -1.23
ATXN3-243ENST00000556671 PLEKHD1A6NEE1 506 aa7.36□□□□□ -1.23
ATXN3-243ENST00000556671 TM4SF5O14894 197 aa7.36□□□□□ -1.23
ATXN3-243ENST00000556671 PCSK2P16519 638 aa7.36□□□□□ -1.23
ATXN3-243ENST00000556671 ARTNQ5T4W7 220 aa7.36□□□□□ -1.23
ATXN3-243ENST00000556671 ERICH6Q7L0X2 663 aa7.36□□□□□ -1.23
ATXN3-243ENST00000556671 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.36□□□□□ -1.23
ATXN3-243ENST00000556671 C1orf127Q8N9H9 656 aa7.36□□□□□ -1.23
ATXN3-243ENST00000556671 KANSL3Q9P2N6 904 aa7.36□□□□□ -1.23
ATXN3-243ENST00000556671 EFCAB5A4FU69 1503 aa7.36□□□□□ -1.23
ATXN3-243ENST00000556671 UHRF1BP1LA0JNW5 1464 aa7.36□□□□□ -1.23
ATXN3-243ENST00000556671 NPR3P17342 541 aa7.35□□□□□ -1.23
ATXN3-243ENST00000556671 ALKBH2Q6NS38 261 aa7.35□□□□□ -1.23
ATXN3-243ENST00000556671 TXNDC11Q6PKC3 985 aa7.35□□□□□ -1.23
ATXN3-243ENST00000556671 PRR23CQ6ZRP0 262 aa7.35□□□□□ -1.23
ATXN3-243ENST00000556671 POP1Q99575 1024 aaKnown RBP7.35□□□□□ -1.23
ATXN3-243ENST00000556671 ADAM19Q9H013 955 aa7.35□□□□□ -1.23
ATXN3-243ENST00000556671 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-243ENST00000556671 DIP2BQ9P265 1576 aa7.34□□□□□ -1.23
ATXN3-243ENST00000556671 MAPKBP1O60336 1514 aa7.34□□□□□ -1.23
ATXN3-243ENST00000556671 A6NHS1 94 aa7.34□□□□□ -1.23
ATXN3-243ENST00000556671 PTPRAP18433 802 aa7.34□□□□□ -1.23
ATXN3-243ENST00000556671 EPHA1P21709 976 aa7.34□□□□□ -1.23
ATXN3-243ENST00000556671 CD68P34810 354 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-243ENST00000556671 MTMR3Q13615 1198 aa7.34□□□□□ -1.23
ATXN3-243ENST00000556671 PHLDB3Q6NSJ2 640 aa7.34□□□□□ -1.23
ATXN3-243ENST00000556671 AGGF1Q8N302 714 aaeCLIP7.34□□□□□ -1.23
ATXN3-243ENST00000556671 ZFP64Q9NPA5 681 aa7.34□□□□□ -1.23
ATXN3-243ENST00000556671 LRRIQ1Q96JM4 1722 aa7.34□□□□□ -1.23
ATXN3-243ENST00000556671 ABCC10Q5T3U5 1492 aa7.34□□□□□ -1.23
ATXN3-243ENST00000556671 ARHGAP35Q9NRY4 1499 aa7.34□□□□□ -1.23
ATXN3-243ENST00000556671 CLIP1P30622 1438 aa7.34□□□□□ -1.23
ATXN3-243ENST00000556671 KDM5BQ9UGL1 1544 aa7.33□□□□□ -1.24
ATXN3-243ENST00000556671 ATP10BO94823 1461 aa7.33□□□□□ -1.24
ATXN3-243ENST00000556671 NFKBIEO00221 500 aa7.33□□□□□ -1.24
ATXN3-243ENST00000556671 FSCN2O14926 492 aa7.33□□□□□ -1.24
ATXN3-243ENST00000556671 WISP1O95388 367 aa7.33□□□□□ -1.24
ATXN3-243ENST00000556671 CES1P23141 567 aa7.33□□□□□ -1.24
ATXN3-243ENST00000556671 C8orf34Q49A92 452 aa7.33□□□□□ -1.24
ATXN3-243ENST00000556671 KLHL23Q8NBE8 558 aa7.33□□□□□ -1.24
ATXN3-243ENST00000556671 CHRDQ9H2X0 955 aa7.33□□□□□ -1.24
ATXN3-243ENST00000556671 SH2B1Q9NRF2 756 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-243ENST00000556671 KCNK4Q9NYG8 393 aa7.33□□□□□ -1.24
ATXN3-243ENST00000556671 POLIQ9UNA4 740 aa7.33□□□□□ -1.24
ATXN3-243ENST00000556671 ACPPP15309 386 aa7.32□□□□□ -1.24
ATXN3-243ENST00000556671 CDC25BP30305 580 aa7.32□□□□□ -1.24
ATXN3-243ENST00000556671 FAM117BQ6P1L5 589 aa7.32□□□□□ -1.24
ATXN3-243ENST00000556671 TTC16Q8NEE8 873 aa7.32□□□□□ -1.24
ATXN3-243ENST00000556671 PMEPA1Q969W9 287 aa7.32□□□□□ -1.24
ATXN3-243ENST00000556671 CARD10Q9BWT7 1032 aa7.32□□□□□ -1.24
ATXN3-243ENST00000556671 DZANK1Q9NVP4 752 aa7.32□□□□□ -1.24
ATXN3-243ENST00000556671 CDK11AQ9UQ88 783 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-243ENST00000556671 FMN1Q68DA7 1419 aa7.32□□□□□ -1.24
ATXN3-243ENST00000556671 CARNS1A5YM72 827 aa7.31□□□□□ -1.24
ATXN3-243ENST00000556671 FAM13AO94988 1023 aa7.31□□□□□ -1.24
ATXN3-243ENST00000556671 GLB1P16278 677 aa7.31□□□□□ -1.24
ATXN3-243ENST00000556671 LRP8Q14114 963 aa7.31□□□□□ -1.24
ATXN3-243ENST00000556671 ACAD11Q709F0 780 aa7.31□□□□□ -1.24
ATXN3-243ENST00000556671 UBL7Q96S82 380 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-243ENST00000556671 MTMR7Q9Y216 660 aa7.31□□□□□ -1.24
ATXN3-243ENST00000556671 CFAP43Q8NDM7 1665 aa7.31□□□□□ -1.24
ATXN3-243ENST00000556671 CDK13Q14004 1512 aaKnown RBP7.31□□□□□ -1.24
ATXN3-243ENST00000556671 HECW1Q76N89 1606 aa7.3□□□□□ -1.24
ATXN3-243ENST00000556671 WDR7Q9Y4E6 1490 aa7.3□□□□□ -1.24
ATXN3-243ENST00000556671 FAM177BA6PVY3 158 aa7.3□□□□□ -1.24
ATXN3-243ENST00000556671 H3BRJ5 948 aa7.3□□□□□ -1.24
ATXN3-243ENST00000556671 SF3B2Q13435 895 aaKnown RBP7.3□□□□□ -1.24
ATXN3-243ENST00000556671 C14orf37Q86TY3 774 aa7.3□□□□□ -1.24
ATXN3-243ENST00000556671 WNT8BQ93098 351 aa7.3□□□□□ -1.24
ATXN3-243ENST00000556671 SEC31BQ9NQW1 1179 aa7.3□□□□□ -1.24
ATXN3-243ENST00000556671 RNF112Q9ULX5 631 aa7.3□□□□□ -1.24
ATXN3-243ENST00000556671 EPRSP07814 1512 aaKnown RBP7.3□□□□□ -1.24
ATXN3-243ENST00000556671 NUP153P49790 1475 aaKnown RBP7.3□□□□□ -1.24
ATXN3-243ENST00000556671 CEP162Q5TB80 1403 aa7.29□□□□□ -1.24
ATXN3-243ENST00000556671 CD109Q6YHK3 1445 aa7.29□□□□□ -1.24
ATXN3-243ENST00000556671 PDE2AO00408 941 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-243ENST00000556671 FZD6O60353 706 aa7.29□□□□□ -1.24
ATXN3-243ENST00000556671 ADAM11O75078 769 aa7.29□□□□□ -1.24
ATXN3-243ENST00000556671 TNFRSF21O75509 655 aa7.29□□□□□ -1.24
ATXN3-243ENST00000556671 TRPA1O75762 1119 aa7.29□□□□□ -1.24
ATXN3-243ENST00000556671 FSTP19883 344 aa7.29□□□□□ -1.24
ATXN3-243ENST00000556671 CABP4P57796 275 aa7.29□□□□□ -1.24
ATXN3-243ENST00000556671 PIP4K2BP78356 416 aa7.29□□□□□ -1.24
ATXN3-243ENST00000556671 FKBP4Q02790 459 aaKnown RBP eCLIP7.29□□□□□ -1.24
ATXN3-243ENST00000556671 EHHADHQ08426 723 aa7.29□□□□□ -1.24
ATXN3-243ENST00000556671 KIAA1211Q6ZU35 1233 aa7.29□□□□□ -1.24
ATXN3-243ENST00000556671 SLC51AQ86UW1 340 aa7.29□□□□□ -1.24
ATXN3-243ENST00000556671 TMEM102Q8N9M5 508 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-243ENST00000556671 FOXD4L4Q8WXT5 416 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-243ENST00000556671 KLHDC7BQ96G42 594 aa7.29□□□□□ -1.24
ATXN3-243ENST00000556671 HHIPQ96QV1 700 aa7.29□□□□□ -1.24
ATXN3-243ENST00000556671 CEP41Q9BYV8 373 aa7.29□□□□□ -1.24
ATXN3-243ENST00000556671 OSGEPQ9NPF4 335 aa7.29□□□□□ -1.24
ATXN3-243ENST00000556671 SOX13Q9UN79 622 aa7.29□□□□□ -1.24
ATXN3-243ENST00000556671 KDM6BO15054 1643 aa7.29□□□□□ -1.24
ATXN3-243ENST00000556671 MAP3K4Q9Y6R4 1608 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms