RNA–Protein interactions for RNA: ENST00000556618.1

RCCD1-206, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RCCD1, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-206ENST00000556618 JAG2Q9Y219 1238 aa29.51■■■□□ 2.31
RCCD1-206ENST00000556618 AKAP11Q9UKA4 1901 aa29.5■■■□□ 2.31
RCCD1-206ENST00000556618 ARID4AP29374 1257 aaPredicted RBP29.5■■■□□ 2.31
RCCD1-206ENST00000556618 RSBN1LQ6PCB5 846 aaPredicted RBP29.5■■■□□ 2.31
RCCD1-206ENST00000556618 ZBTB47Q9UFB7 747 aaPredicted RBP29.5■■■□□ 2.31
RCCD1-206ENST00000556618 UQCRFS1P1P0C7P4 283 aa29.49■■■□□ 2.31
RCCD1-206ENST00000556618 TTC39AQ5SRH9 613 aa29.49■■■□□ 2.31
RCCD1-206ENST00000556618 MXD3Q9BW11 206 aa29.49■■■□□ 2.31
RCCD1-206ENST00000556618 DENND2AQ9ULE3 1009 aa29.49■■■□□ 2.31
RCCD1-206ENST00000556618 ZBTB12Q9Y330 459 aaPredicted RBP29.49■■■□□ 2.31
RCCD1-206ENST00000556618 CHAF1AQ13111 956 aaPredicted RBP29.48■■■□□ 2.31
RCCD1-206ENST00000556618 RASGRF1Q13972 1273 aa29.48■■■□□ 2.31
RCCD1-206ENST00000556618 L3MBTL3Q96JM7 780 aaPredicted RBP29.48■■■□□ 2.31
RCCD1-206ENST00000556618 ZNF512BQ96KM6 892 aaPredicted RBP29.48■■■□□ 2.31
RCCD1-206ENST00000556618 COL1A1P02452 1464 aaPredicted RBP29.48■■■□□ 2.31
RCCD1-206ENST00000556618 WDR90Q96KV7 1748 aa29.48■■■□□ 2.31
RCCD1-206ENST00000556618 GMPSP49915 693 aaPredicted RBP29.47■■■□□ 2.31
RCCD1-206ENST00000556618 C16orf71Q8IYS4 520 aaPredicted RBP29.47■■■□□ 2.31
RCCD1-206ENST00000556618 ZNF526Q8TF50 670 aaPredicted RBP29.47■■■□□ 2.31
RCCD1-206ENST00000556618 FKBP1AP62942 108 aaKnown RBP29.47■■■□□ 2.31
RCCD1-206ENST00000556618 NUCB1Q02818 461 aa29.47■■■□□ 2.31
RCCD1-206ENST00000556618 AGBL3Q8NEM8 1001 aa29.47■■■□□ 2.31
RCCD1-206ENST00000556618 RPS12P25398 132 aaKnown RBP29.46■■■□□ 2.31
RCCD1-206ENST00000556618 SCARF1Q14162 830 aa29.46■■■□□ 2.31
RCCD1-206ENST00000556618 CERS5Q8N5B7 392 aa29.46■■■□□ 2.31
RCCD1-206ENST00000556618 DPF2Q92785 391 aa29.46■■■□□ 2.31
RCCD1-206ENST00000556618 GMLQ99445 158 aa29.46■■■□□ 2.31
RCCD1-206ENST00000556618 HMG20BQ9P0W2 317 aa29.46■■■□□ 2.31
RCCD1-206ENST00000556618 MCAMP43121 646 aa29.45■■■□□ 2.31
RCCD1-206ENST00000556618 CCDC136Q96JN2 1154 aa29.45■■■□□ 2.31
RCCD1-206ENST00000556618 SCN4AP35499 1836 aa29.45■■■□□ 2.3
RCCD1-206ENST00000556618 PDS5AQ29RF7 1337 aaKnown RBP29.45■■■□□ 2.3
RCCD1-206ENST00000556618 MYO3BQ8WXR4 1341 aa29.45■■■□□ 2.3
RCCD1-206ENST00000556618 SCNN1DP51172 638 aa29.44■■■□□ 2.3
RCCD1-206ENST00000556618 MFSD14BQ5SR56 506 aa29.44■■■□□ 2.3
RCCD1-206ENST00000556618 CHD1LQ86WJ1 897 aa29.44■■■□□ 2.3
RCCD1-206ENST00000556618 SPATA5Q8NB90 893 aa29.44■■■□□ 2.3
RCCD1-206ENST00000556618 WDR66Q8TBY9 1149 aa29.44■■■□□ 2.3
RCCD1-206ENST00000556618 TBC1D22AQ8WUA7 517 aa29.44■■■□□ 2.3
RCCD1-206ENST00000556618 LNPKQ9C0E8 428 aa29.44■■■□□ 2.3
RCCD1-206ENST00000556618 POTECB2RU33 542 aa29.43■■■□□ 2.3
RCCD1-206ENST00000556618 PI16Q6UXB8 463 aa29.43■■■□□ 2.3
RCCD1-206ENST00000556618 GPRC5DQ9NZD1 345 aa29.43■■■□□ 2.3
RCCD1-206ENST00000556618 OTUD7AQ8TE49 926 aaPredicted RBP29.42■■■□□ 2.3
RCCD1-206ENST00000556618 RRAGCQ9HB90 399 aa29.42■■■□□ 2.3
RCCD1-206ENST00000556618 PPP4R2Q9NY27 417 aa29.42■■■□□ 2.3
RCCD1-206ENST00000556618 CNOT7Q9UIV1 285 aaKnown RBP29.42■■■□□ 2.3
RCCD1-206ENST00000556618 NMRK2Q9NPI5 230 aa29.41■■■□□ 2.3
RCCD1-206ENST00000556618 SNRKQ9NRH2 765 aa29.41■■■□□ 2.3
RCCD1-206ENST00000556618 SALL1Q9NSC2 1324 aa29.41■■■□□ 2.3
RCCD1-206ENST00000556618 ATP5JP18859 108 aa29.4■■■□□ 2.3
RCCD1-206ENST00000556618 LMOD1P29536 600 aaPredicted RBP29.4■■■□□ 2.3
RCCD1-206ENST00000556618 CENPQQ7L2Z9 268 aaPredicted RBP29.4■■■□□ 2.3
RCCD1-206ENST00000556618 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.4■■■□□ 2.3
RCCD1-206ENST00000556618 GPBP1L1Q9HC44 474 aaPredicted RBP29.4■■■□□ 2.3
RCCD1-206ENST00000556618 ECHDC1Q9NTX5 307 aa29.4■■■□□ 2.3
RCCD1-206ENST00000556618 EPS15P42566 896 aa29.39■■■□□ 2.3
RCCD1-206ENST00000556618 KIAA0825Q8IV33 1275 aa29.39■■■□□ 2.3
RCCD1-206ENST00000556618 ZNF784Q8NCA9 323 aaPredicted RBP29.39■■■□□ 2.3
RCCD1-206ENST00000556618 HACL1Q9UJ83 578 aa29.39■■■□□ 2.3
RCCD1-206ENST00000556618 SALL3Q9BXA9 1300 aa29.39■■■□□ 2.3
RCCD1-206ENST00000556618 SHTN1A0MZ66 631 aa29.39■■■□□ 2.29
RCCD1-206ENST00000556618 IQCA1LA6NCM1 817 aa29.39■■■□□ 2.29
RCCD1-206ENST00000556618 USP17L8P0C7I0 530 aa29.39■■■□□ 2.29
RCCD1-206ENST00000556618 VEGFAP15692 232 aaPredicted RBP29.39■■■□□ 2.29
RCCD1-206ENST00000556618 MICALL2Q8IY33 904 aa29.39■■■□□ 2.29
RCCD1-206ENST00000556618 GPATCH3Q96I76 525 aa29.39■■■□□ 2.29
RCCD1-206ENST00000556618 MYO5AQ9Y4I1 1855 aaKnown RBP29.38■■■□□ 2.29
RCCD1-206ENST00000556618 ZAP70P43403 619 aa29.38■■■□□ 2.29
RCCD1-206ENST00000556618 GRIK5Q16478 980 aa29.38■■■□□ 2.29
RCCD1-206ENST00000556618 MX1P20591 662 aa29.37■■■□□ 2.29
RCCD1-206ENST00000556618 SUGT1Q9Y2Z0 365 aa29.37■■■□□ 2.29
RCCD1-206ENST00000556618 H7C1D1 291 aa29.36■■■□□ 2.29
RCCD1-206ENST00000556618 ZGPATQ8N5A5 531 aaKnown RBP29.36■■■□□ 2.29
RCCD1-206ENST00000556618 TTC41PQ6P2S7 1318 aa29.36■■■□□ 2.29
RCCD1-206ENST00000556618 F8W031 263 aaPredicted RBP29.35■■■□□ 2.29
RCCD1-206ENST00000556618 CYP2E1P05181 493 aaPredicted RBP29.35■■■□□ 2.29
RCCD1-206ENST00000556618 ZNF280AP59817 542 aaPredicted RBP29.35■■■□□ 2.29
RCCD1-206ENST00000556618 TSHZ3Q63HK5 1081 aa29.35■■■□□ 2.29
RCCD1-206ENST00000556618 TBC1D9Q6ZT07 1266 aa29.35■■■□□ 2.29
RCCD1-206ENST00000556618 OGFOD1Q8N543 542 aa29.35■■■□□ 2.29
RCCD1-206ENST00000556618 BOLA2Q9H3K6 86 aa29.35■■■□□ 2.29
RCCD1-206ENST00000556618 TAF1DQ9H5J8 278 aaPredicted RBP29.35■■■□□ 2.29
RCCD1-206ENST00000556618 ABCF2Q9UG63 623 aa29.35■■■□□ 2.29
RCCD1-206ENST00000556618 NDUFB9Q9Y6M9 179 aa29.35■■■□□ 2.29
RCCD1-206ENST00000556618 MMP14P50281 582 aa29.35■■■□□ 2.29
RCCD1-206ENST00000556618 STAP2Q9UGK3 403 aa29.35■■■□□ 2.29
RCCD1-206ENST00000556618 TTF2Q9UNY4 1162 aaKnown RBP29.35■■■□□ 2.29
RCCD1-206ENST00000556618 PRDX5P30044 214 aa29.34■■■□□ 2.29
RCCD1-206ENST00000556618 EPHX2P34913 555 aa29.34■■■□□ 2.29
RCCD1-206ENST00000556618 ADARB2Q9NS39 739 aaKnown RBP29.34■■■□□ 2.29
RCCD1-206ENST00000556618 HDAC9Q9UKV0 1011 aa29.34■■■□□ 2.29
RCCD1-206ENST00000556618 LDHBP07195 334 aaKnown RBP29.33■■■□□ 2.29
RCCD1-206ENST00000556618 PDE1AP54750 535 aa29.33■■■□□ 2.29
RCCD1-206ENST00000556618 SPTY2D1Q68D10 685 aaPredicted RBP29.33■■■□□ 2.29
RCCD1-206ENST00000556618 HAUS7Q99871 368 aa29.33■■■□□ 2.29
RCCD1-206ENST00000556618 SAMD7Q7Z3H4 446 aa29.32■■■□□ 2.28
RCCD1-206ENST00000556618 PI4K2BQ8TCG2 481 aa29.32■■■□□ 2.28
RCCD1-206ENST00000556618 DNAJC2Q99543 621 aaKnown RBP29.32■■■□□ 2.28
RCCD1-206ENST00000556618 ERC2O15083 957 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms