RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 COL9A3Q14050 684 aaPredicted RBP17.25■□□□□ 0.35
NEK9-209ENST00000556170 MAP7D2Q96T17 732 aa17.25■□□□□ 0.35
NEK9-209ENST00000556170 M0R2C6 588 aa17.25■□□□□ 0.35
NEK9-209ENST00000556170 TSC1Q92574 1164 aa17.25■□□□□ 0.35
NEK9-209ENST00000556170 CARD10Q9BWT7 1032 aa17.25■□□□□ 0.35
NEK9-209ENST00000556170 ANKRD26Q9UPS8 1709 aa17.25■□□□□ 0.35
NEK9-209ENST00000556170 G3V3G9 751 aa17.24■□□□□ 0.35
NEK9-209ENST00000556170 ADD1P35611 737 aaKnown RBP17.24■□□□□ 0.35
NEK9-209ENST00000556170 DCAF8Q5TAQ9 597 aa17.24■□□□□ 0.35
NEK9-209ENST00000556170 NGLY1Q96IV0 654 aa17.24■□□□□ 0.35
NEK9-209ENST00000556170 ZNF532Q9HCE3 1301 aa17.24■□□□□ 0.35
NEK9-209ENST00000556170 A0A0G2JLW4 131 aa17.24■□□□□ 0.35
NEK9-209ENST00000556170 HS1BP3Q53T59 392 aa17.24■□□□□ 0.35
NEK9-209ENST00000556170 AOPEPQ8N6M6 819 aa17.24■□□□□ 0.35
NEK9-209ENST00000556170 CBX8Q9HC52 389 aa17.24■□□□□ 0.35
NEK9-209ENST00000556170 XBP1P17861 261 aa17.24■□□□□ 0.35
NEK9-209ENST00000556170 PHKA1P46020 1223 aa17.24■□□□□ 0.35
NEK9-209ENST00000556170 MRPS27Q92552 414 aaKnown RBP17.24■□□□□ 0.35
NEK9-209ENST00000556170 PUS7LQ9H0K6 701 aaKnown RBP17.24■□□□□ 0.35
NEK9-209ENST00000556170 CAVIN4Q5BKX8 364 aa17.23■□□□□ 0.35
NEK9-209ENST00000556170 SPTLC2O15270 562 aa17.23■□□□□ 0.35
NEK9-209ENST00000556170 UQCRFS1P1P0C7P4 283 aa17.23■□□□□ 0.35
NEK9-209ENST00000556170 CTDSPL2Q05D32 466 aa17.23■□□□□ 0.35
NEK9-209ENST00000556170 STX1AQ16623 288 aa17.23■□□□□ 0.35
NEK9-209ENST00000556170 ZMYM1Q5SVZ6 1142 aa17.23■□□□□ 0.35
NEK9-209ENST00000556170 ZBTB38Q8NAP3 1195 aaPredicted RBP17.23■□□□□ 0.35
NEK9-209ENST00000556170 NOL10Q9BSC4 688 aaKnown RBP17.23■□□□□ 0.35
NEK9-209ENST00000556170 DSCC1Q9BVC3 393 aa17.23■□□□□ 0.35
NEK9-209ENST00000556170 UTP14AQ9BVJ6 771 aaKnown RBP17.23■□□□□ 0.35
NEK9-209ENST00000556170 HOOK1Q9UJC3 728 aaKnown RBP17.23■□□□□ 0.35
NEK9-209ENST00000556170 NCAPD2Q15021 1401 aa17.23■□□□□ 0.35
NEK9-209ENST00000556170 CFAP100Q494V2 611 aa17.23■□□□□ 0.35
NEK9-209ENST00000556170 SSRP1Q08945 709 aaKnown RBP17.22■□□□□ 0.35
NEK9-209ENST00000556170 CCDC152Q4G0S7 254 aa17.22■□□□□ 0.35
NEK9-209ENST00000556170 PDIA3P30101 505 aaKnown RBP17.22■□□□□ 0.35
NEK9-209ENST00000556170 FOXO4P98177 505 aa17.22■□□□□ 0.35
NEK9-209ENST00000556170 KLHL10Q6JEL2 608 aa17.22■□□□□ 0.35
NEK9-209ENST00000556170 BBXQ8WY36 941 aaPredicted RBP17.22■□□□□ 0.35
NEK9-209ENST00000556170 SH3TC1Q8TE82 1336 aa17.22■□□□□ 0.35
NEK9-209ENST00000556170 PRDM1O75626 825 aa17.22■□□□□ 0.35
NEK9-209ENST00000556170 SCARF1Q14162 830 aa17.22■□□□□ 0.35
NEK9-209ENST00000556170 CMTR1Q8N1G2 835 aaKnown RBP17.22■□□□□ 0.35
NEK9-209ENST00000556170 REREQ9P2R6 1566 aa17.22■□□□□ 0.35
NEK9-209ENST00000556170 NRXN3Q9Y4C0 1643 aa17.22■□□□□ 0.35
NEK9-209ENST00000556170 ZNF652Q9Y2D9 606 aa17.21■□□□□ 0.35
NEK9-209ENST00000556170 PDE8AO60658 829 aa17.21■□□□□ 0.35
NEK9-209ENST00000556170 PCCAP05165 728 aaPredicted RBP17.21■□□□□ 0.35
NEK9-209ENST00000556170 GIGYF2Q6Y7W6 1299 aaKnown RBP17.21■□□□□ 0.35
NEK9-209ENST00000556170 DLG5Q8TDM6 1919 aa17.21■□□□□ 0.35
NEK9-209ENST00000556170 CTAGE5O15320 804 aa17.21■□□□□ 0.35
NEK9-209ENST00000556170 LMOD1P29536 600 aaPredicted RBP17.21■□□□□ 0.35
NEK9-209ENST00000556170 CTSWP56202 376 aa17.21■□□□□ 0.35
NEK9-209ENST00000556170 SPECC1Q5M775 1068 aa17.21■□□□□ 0.35
NEK9-209ENST00000556170 UBR1Q8IWV7 1749 aa17.21■□□□□ 0.35
NEK9-209ENST00000556170 RPAP1Q9BWH6 1393 aaPredicted RBP17.21■□□□□ 0.34
NEK9-209ENST00000556170 CCDC102BQ68D86 513 aa17.21■□□□□ 0.34
NEK9-209ENST00000556170 ATG9AQ7Z3C6 839 aa17.21■□□□□ 0.34
NEK9-209ENST00000556170 CNNM3Q8NE01 707 aa17.21■□□□□ 0.34
NEK9-209ENST00000556170 SEC31BQ9NQW1 1179 aa17.21■□□□□ 0.34
NEK9-209ENST00000556170 WTAPQ15007 396 aa17.2■□□□□ 0.34
NEK9-209ENST00000556170 STOX1Q6ZVD7 989 aa17.2■□□□□ 0.34
NEK9-209ENST00000556170 ZNF771Q7L3S4 317 aaPredicted RBP17.2■□□□□ 0.34
NEK9-209ENST00000556170 NSUN7Q8NE18 718 aaKnown RBP17.2■□□□□ 0.34
NEK9-209ENST00000556170 hCG_1642624A0A1W2PR95 340 aa17.2■□□□□ 0.34
NEK9-209ENST00000556170 PFKFB2O60825 505 aa17.2■□□□□ 0.34
NEK9-209ENST00000556170 MEX3CQ5U5Q3 659 aaKnown RBP17.2■□□□□ 0.34
NEK9-209ENST00000556170 AMOTL1Q8IY63 956 aa17.2■□□□□ 0.34
NEK9-209ENST00000556170 CLSTN2Q9H4D0 955 aa17.2■□□□□ 0.34
NEK9-209ENST00000556170 ARHGAP23Q9P227 1491 aa17.2■□□□□ 0.34
NEK9-209ENST00000556170 TNNT1P13805 278 aa17.2■□□□□ 0.34
NEK9-209ENST00000556170 SYKP43405 635 aa17.2■□□□□ 0.34
NEK9-209ENST00000556170 RFX5P48382 616 aaPredicted RBP17.2■□□□□ 0.34
NEK9-209ENST00000556170 CCDC112Q8NEF3 446 aa17.2■□□□□ 0.34
NEK9-209ENST00000556170 BCAMP50895 628 aa17.19■□□□□ 0.34
NEK9-209ENST00000556170 CDC5LQ99459 802 aaKnown RBP17.19■□□□□ 0.34
NEK9-209ENST00000556170 BRMS1Q9HCU9 246 aa17.19■□□□□ 0.34
NEK9-209ENST00000556170 INCENPQ9NQS7 918 aa17.19■□□□□ 0.34
NEK9-209ENST00000556170 LRMPQ12912 555 aa17.19■□□□□ 0.34
NEK9-209ENST00000556170 TMC6Q7Z403 805 aa17.19■□□□□ 0.34
NEK9-209ENST00000556170 ANGEL1Q9UNK9 670 aaKnown RBP17.19■□□□□ 0.34
NEK9-209ENST00000556170 MAP3K15Q6ZN16 1313 aa17.19■□□□□ 0.34
NEK9-209ENST00000556170 USP42Q9H9J4 1324 aaKnown RBP17.19■□□□□ 0.34
NEK9-209ENST00000556170 C3P01024 1663 aa17.19■□□□□ 0.34
NEK9-209ENST00000556170 ZPR1O75312 459 aa17.19■□□□□ 0.34
NEK9-209ENST00000556170 NLRP10Q86W26 655 aa17.19■□□□□ 0.34
NEK9-209ENST00000556170 ANKIB1Q9P2G1 1089 aa17.19■□□□□ 0.34
NEK9-209ENST00000556170 MARCH6O60337 910 aa17.18■□□□□ 0.34
NEK9-209ENST00000556170 PUM3Q15397 648 aaKnown RBP17.18■□□□□ 0.34
NEK9-209ENST00000556170 ANKRD18AQ8IVF6 992 aa17.18■□□□□ 0.34
NEK9-209ENST00000556170 LLPHQ9BRT6 129 aaKnown RBP17.18■□□□□ 0.34
NEK9-209ENST00000556170 PEAK1Q9H792 1746 aa17.18■□□□□ 0.34
NEK9-209ENST00000556170 RABL6Q3YEC7 729 aaPredicted RBP17.18■□□□□ 0.34
NEK9-209ENST00000556170 KCNG4Q8TDN1 519 aa17.18■□□□□ 0.34
NEK9-209ENST00000556170 AIFM3Q96NN9 605 aa17.18■□□□□ 0.34
NEK9-209ENST00000556170 SLIT1O75093 1534 aa17.17■□□□□ 0.34
NEK9-209ENST00000556170 PDE6AP16499 860 aa17.17■□□□□ 0.34
NEK9-209ENST00000556170 C8orf37Q96NL8 207 aa17.17■□□□□ 0.34
NEK9-209ENST00000556170 PDE8BO95263 885 aa17.17■□□□□ 0.34
NEK9-209ENST00000556170 FAM160A1Q05DH4 1040 aa17.17■□□□□ 0.34
NEK9-209ENST00000556170 TTLL11Q8NHH1 800 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms