RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 TTLL5Q6EMB2 1281 aa14.05□□□□□ -0.16
GABRB3-210ENST00000556166 CERS5Q8N5B7 392 aa14.05□□□□□ -0.16
GABRB3-210ENST00000556166 ECHDC1Q9NTX5 307 aa14.05□□□□□ -0.16
GABRB3-210ENST00000556166 GNL3LQ9NVN8 582 aaKnown RBP14.05□□□□□ -0.16
GABRB3-210ENST00000556166 FAM205AQ6ZU69 1335 aa14.04□□□□□ -0.16
GABRB3-210ENST00000556166 USP17L3A6NCW0 530 aa14.04□□□□□ -0.16
GABRB3-210ENST00000556166 USP17L4A6NCW7 530 aa14.04□□□□□ -0.16
GABRB3-210ENST00000556166 UQCRFS1P1P0C7P4 283 aa14.04□□□□□ -0.16
GABRB3-210ENST00000556166 MX1P20591 662 aa14.04□□□□□ -0.16
GABRB3-210ENST00000556166 PDE1AP54750 535 aa14.04□□□□□ -0.16
GABRB3-210ENST00000556166 CHAF1AQ13111 956 aaPredicted RBP14.04□□□□□ -0.16
GABRB3-210ENST00000556166 GRIK5Q16478 980 aa14.04□□□□□ -0.16
GABRB3-210ENST00000556166 USP17L1Q7RTZ2 530 aa14.04□□□□□ -0.16
GABRB3-210ENST00000556166 SPATA5Q8NB90 893 aa14.04□□□□□ -0.16
GABRB3-210ENST00000556166 PI4K2BQ8TCG2 481 aa14.04□□□□□ -0.16
GABRB3-210ENST00000556166 ZBTB47Q9UFB7 747 aaPredicted RBP14.04□□□□□ -0.16
GABRB3-210ENST00000556166 SEMA3EO15041 775 aa14.03□□□□□ -0.16
GABRB3-210ENST00000556166 ZAP70P43403 619 aa14.03□□□□□ -0.16
GABRB3-210ENST00000556166 STRIP1Q5VSL9 837 aa14.03□□□□□ -0.16
GABRB3-210ENST00000556166 CIAPIN1Q6FI81 312 aa14.03□□□□□ -0.16
GABRB3-210ENST00000556166 TBC1D9Q6ZT07 1266 aa14.03□□□□□ -0.16
GABRB3-210ENST00000556166 GMLQ99445 158 aa14.03□□□□□ -0.16
GABRB3-210ENST00000556166 BOLA2Q9H3K6 86 aa14.03□□□□□ -0.16
GABRB3-210ENST00000556166 ZBTB12Q9Y330 459 aaPredicted RBP14.03□□□□□ -0.16
GABRB3-210ENST00000556166 CHD4Q14839 1912 aa14.03□□□□□ -0.16
GABRB3-210ENST00000556166 FRAT2O75474 233 aaPredicted RBP14.02□□□□□ -0.16
GABRB3-210ENST00000556166 DDNO94850 711 aaPredicted RBP14.02□□□□□ -0.16
GABRB3-210ENST00000556166 EIF6P56537 245 aaKnown RBP14.02□□□□□ -0.16
GABRB3-210ENST00000556166 FBXW7Q969H0 707 aa14.02□□□□□ -0.16
GABRB3-210ENST00000556166 EDC3Q96F86 508 aaKnown RBP14.02□□□□□ -0.16
GABRB3-210ENST00000556166 DENND2AQ9ULE3 1009 aa14.02□□□□□ -0.16
GABRB3-210ENST00000556166 SCN9AQ15858 1988 aa14.02□□□□□ -0.17
GABRB3-210ENST00000556166 ARAP2Q8WZ64 1704 aa14.01□□□□□ -0.17
GABRB3-210ENST00000556166 CYP2E1P05181 493 aaPredicted RBP14.01□□□□□ -0.17
GABRB3-210ENST00000556166 TNIP1Q15025 636 aa14.01□□□□□ -0.17
GABRB3-210ENST00000556166 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.01□□□□□ -0.17
GABRB3-210ENST00000556166 HAUS7Q99871 368 aa14.01□□□□□ -0.17
GABRB3-210ENST00000556166 ANTXR1Q9H6X2 564 aa14.01□□□□□ -0.17
GABRB3-210ENST00000556166 PIH1D3Q9NQM4 214 aaKnown RBP14.01□□□□□ -0.17
GABRB3-210ENST00000556166 GJA3Q9Y6H8 435 aa14.01□□□□□ -0.17
GABRB3-210ENST00000556166 PDS5AQ29RF7 1337 aaKnown RBP14.01□□□□□ -0.17
GABRB3-210ENST00000556166 TTC41PQ6P2S7 1318 aa14.01□□□□□ -0.17
GABRB3-210ENST00000556166 SHTN1A0MZ66 631 aa14□□□□□ -0.17
GABRB3-210ENST00000556166 RSBN1LQ6PCB5 846 aaPredicted RBP14□□□□□ -0.17
GABRB3-210ENST00000556166 OSBPL3Q9H4L5 887 aa14□□□□□ -0.17
GABRB3-210ENST00000556166 CCDC88AQ3V6T2 1871 aa14□□□□□ -0.17
GABRB3-210ENST00000556166 ZC3H4Q9UPT8 1303 aaKnown RBP14□□□□□ -0.17
GABRB3-210ENST00000556166 GLTPD2A6NH11 291 aa14□□□□□ -0.17
GABRB3-210ENST00000556166 GMPSP49915 693 aaPredicted RBP14□□□□□ -0.17
GABRB3-210ENST00000556166 MFSD14BQ5SR56 506 aa14□□□□□ -0.17
GABRB3-210ENST00000556166 GPC2Q8N158 579 aa14□□□□□ -0.17
GABRB3-210ENST00000556166 WDR66Q8TBY9 1149 aa14□□□□□ -0.17
GABRB3-210ENST00000556166 MAP4K4O95819 1239 aaPredicted RBP13.99□□□□□ -0.17
GABRB3-210ENST00000556166 FKBP1AP62942 108 aaKnown RBP13.99□□□□□ -0.17
GABRB3-210ENST00000556166 ZNF384Q8TF68 577 aa13.99□□□□□ -0.17
GABRB3-210ENST00000556166 GPATCH3Q96I76 525 aa13.99□□□□□ -0.17
GABRB3-210ENST00000556166 DNAJC2Q99543 621 aaKnown RBP13.99□□□□□ -0.17
GABRB3-210ENST00000556166 SALL1Q9NSC2 1324 aa13.98□□□□□ -0.17
GABRB3-210ENST00000556166 POTECB2RU33 542 aa13.98□□□□□ -0.17
GABRB3-210ENST00000556166 GOLIM4O00461 696 aa13.98□□□□□ -0.17
GABRB3-210ENST00000556166 GLRX3O76003 335 aaKnown RBP13.98□□□□□ -0.17
GABRB3-210ENST00000556166 PRDX5P30044 214 aa13.98□□□□□ -0.17
GABRB3-210ENST00000556166 SCNN1DP51172 638 aa13.98□□□□□ -0.17
GABRB3-210ENST00000556166 DICER1Q9UPY3 1922 aaKnown RBP13.98□□□□□ -0.17
GABRB3-210ENST00000556166 AOX1Q06278 1338 aa13.97□□□□□ -0.17
GABRB3-210ENST00000556166 ERC2O15083 957 aa13.97□□□□□ -0.17
GABRB3-210ENST00000556166 DPY19L2Q6NUT2 758 aa13.97□□□□□ -0.17
GABRB3-210ENST00000556166 KIAA0825Q8IV33 1275 aa13.97□□□□□ -0.17
GABRB3-210ENST00000556166 AGBL3Q8NEM8 1001 aa13.97□□□□□ -0.17
GABRB3-210ENST00000556166 TBC1D22AQ8WUA7 517 aa13.97□□□□□ -0.17
GABRB3-210ENST00000556166 ABCF2Q9UG63 623 aa13.97□□□□□ -0.17
GABRB3-210ENST00000556166 F8W031 263 aaPredicted RBP13.96□□□□□ -0.17
GABRB3-210ENST00000556166 CHGBP05060 677 aa13.96□□□□□ -0.17
GABRB3-210ENST00000556166 EPS15P42566 896 aa13.96□□□□□ -0.17
GABRB3-210ENST00000556166 DPF2Q92785 391 aa13.96□□□□□ -0.17
GABRB3-210ENST00000556166 L3MBTL3Q96JM7 780 aaPredicted RBP13.96□□□□□ -0.17
GABRB3-210ENST00000556166 PAG1Q9NWQ8 432 aa13.96□□□□□ -0.17
GABRB3-210ENST00000556166 AKAP11Q9UKA4 1901 aa13.96□□□□□ -0.17
GABRB3-210ENST00000556166 EGFRP00533 1210 aa13.96□□□□□ -0.18
GABRB3-210ENST00000556166 GSPT1P15170 499 aaKnown RBP13.96□□□□□ -0.18
GABRB3-210ENST00000556166 RPS12P25398 132 aaKnown RBP13.96□□□□□ -0.18
GABRB3-210ENST00000556166 RGS3P49796 1198 aa13.96□□□□□ -0.18
GABRB3-210ENST00000556166 SLFNL1Q499Z3 407 aa13.96□□□□□ -0.18
GABRB3-210ENST00000556166 GPRC5DQ9NZD1 345 aa13.96□□□□□ -0.18
GABRB3-210ENST00000556166 CNOT7Q9UIV1 285 aaKnown RBP13.96□□□□□ -0.18
GABRB3-210ENST00000556166 PCDHAC2Q9Y5I4 1007 aa13.96□□□□□ -0.18
GABRB3-210ENST00000556166 ZNF646O15015 1829 aaPredicted RBP13.95□□□□□ -0.18
GABRB3-210ENST00000556166 LDHBP07195 334 aaKnown RBP13.95□□□□□ -0.18
GABRB3-210ENST00000556166 USP17L8P0C7I0 530 aa13.95□□□□□ -0.18
GABRB3-210ENST00000556166 ZNF280AP59817 542 aaPredicted RBP13.95□□□□□ -0.18
GABRB3-210ENST00000556166 MECOMQ03112 1051 aa13.95□□□□□ -0.18
GABRB3-210ENST00000556166 TTC22Q5TAA0 569 aa13.95□□□□□ -0.18
GABRB3-210ENST00000556166 MICALL2Q8IY33 904 aa13.95□□□□□ -0.18
GABRB3-210ENST00000556166 LRP2BPQ9P2M1 347 aa13.95□□□□□ -0.18
GABRB3-210ENST00000556166 TTF2Q9UNY4 1162 aaKnown RBP13.95□□□□□ -0.18
GABRB3-210ENST00000556166 SUGT1Q9Y2Z0 365 aa13.95□□□□□ -0.18
GABRB3-210ENST00000556166 TIAM2Q8IVF5 1701 aa13.94□□□□□ -0.18
GABRB3-210ENST00000556166 DIXDC1Q155Q3 683 aa13.94□□□□□ -0.18
GABRB3-210ENST00000556166 ERICH6Q7L0X2 663 aa13.94□□□□□ -0.18
GABRB3-210ENST00000556166 ZNF526Q8TF50 670 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms