RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 ZBTB38Q8NAP3 1195 aaPredicted RBP7.54□□□□□ -1.2
PRKCH-220ENST00000556164 AGBL3Q8NEM8 1001 aa7.54□□□□□ -1.2
PRKCH-220ENST00000556164 CCDC85AQ96PX6 553 aaPredicted RBP7.54□□□□□ -1.2
PRKCH-220ENST00000556164 MYOZ2Q9NPC6 264 aa7.54□□□□□ -1.2
PRKCH-220ENST00000556164 HYPKQ9NX55 129 aa7.54□□□□□ -1.2
PRKCH-220ENST00000556164 SCAF8Q9UPN6 1271 aaKnown RBP7.54□□□□□ -1.2
PRKCH-220ENST00000556164 HPS5Q9UPZ3 1129 aa7.54□□□□□ -1.2
PRKCH-220ENST00000556164 EIF5BO60841 1220 aaKnown RBP7.53□□□□□ -1.2
PRKCH-220ENST00000556164 TBC1D8O95759 1140 aa7.53□□□□□ -1.2
PRKCH-220ENST00000556164 USP17L8P0C7I0 530 aa7.53□□□□□ -1.2
PRKCH-220ENST00000556164 GOLGA2Q08379 1002 aa7.53□□□□□ -1.2
PRKCH-220ENST00000556164 TRIM28Q13263 835 aaKnown RBP7.53□□□□□ -1.2
PRKCH-220ENST00000556164 TTLL12Q14166 644 aaPredicted RBP7.53□□□□□ -1.2
PRKCH-220ENST00000556164 CCDC152Q4G0S7 254 aa7.53□□□□□ -1.2
PRKCH-220ENST00000556164 PRPF38BQ5VTL8 546 aaKnown RBP7.53□□□□□ -1.2
PRKCH-220ENST00000556164 DUSP27Q5VZP5 1158 aa7.53□□□□□ -1.2
PRKCH-220ENST00000556164 MYD88Q99836 296 aa7.53□□□□□ -1.2
PRKCH-220ENST00000556164 TRIM35Q9UPQ4 493 aa7.53□□□□□ -1.2
PRKCH-220ENST00000556164 XDHP47989 1333 aa7.52□□□□□ -1.2
PRKCH-220ENST00000556164 PITPNM2Q9BZ72 1349 aa7.52□□□□□ -1.2
PRKCH-220ENST00000556164 USP17L3A6NCW0 530 aa7.52□□□□□ -1.21
PRKCH-220ENST00000556164 USP17L4A6NCW7 530 aa7.52□□□□□ -1.21
PRKCH-220ENST00000556164 UBE2Q2LH0YL09 131 aa7.52□□□□□ -1.21
PRKCH-220ENST00000556164 PDE8AO60658 829 aa7.52□□□□□ -1.21
PRKCH-220ENST00000556164 WDR43Q15061 677 aaKnown RBP eCLIP7.52□□□□□ -1.21
PRKCH-220ENST00000556164 RALBP1Q15311 655 aa7.52□□□□□ -1.21
PRKCH-220ENST00000556164 PKN2Q16513 984 aaKnown RBP7.52□□□□□ -1.21
PRKCH-220ENST00000556164 PRAMEF18Q5VWM3 479 aa7.52□□□□□ -1.21
PRKCH-220ENST00000556164 USP17L1Q7RTZ2 530 aa7.52□□□□□ -1.21
PRKCH-220ENST00000556164 ANKRD18AQ8IVF6 992 aa7.52□□□□□ -1.21
PRKCH-220ENST00000556164 ZNF579Q8NAF0 562 aaKnown RBP7.52□□□□□ -1.21
PRKCH-220ENST00000556164 ZNF296Q8WUU4 475 aaPredicted RBP7.52□□□□□ -1.21
PRKCH-220ENST00000556164 JARID2Q92833 1246 aaPredicted RBP7.52□□□□□ -1.21
PRKCH-220ENST00000556164 RUNDC1Q96C34 613 aa7.52□□□□□ -1.21
PRKCH-220ENST00000556164 GMLQ99445 158 aa7.52□□□□□ -1.21
PRKCH-220ENST00000556164 ECM29Q5VYK3 1845 aa7.52□□□□□ -1.21
PRKCH-220ENST00000556164 PCCAP05165 728 aaPredicted RBP7.51□□□□□ -1.21
PRKCH-220ENST00000556164 ATP2B4P23634 1241 aa7.51□□□□□ -1.21
PRKCH-220ENST00000556164 NF2P35240 595 aa7.51□□□□□ -1.21
PRKCH-220ENST00000556164 NBPF9Q3BBW0 867 aa7.51□□□□□ -1.21
PRKCH-220ENST00000556164 PODNQ7Z5L7 613 aa7.51□□□□□ -1.21
PRKCH-220ENST00000556164 CCDC191Q8NCU4 936 aa7.51□□□□□ -1.21
PRKCH-220ENST00000556164 PHAXQ9H814 394 aaKnown RBP7.51□□□□□ -1.21
PRKCH-220ENST00000556164 MBIPQ9NS73 344 aa7.51□□□□□ -1.21
PRKCH-220ENST00000556164 CWC25Q9NXE8 425 aaPredicted RBP7.51□□□□□ -1.21
PRKCH-220ENST00000556164 MED23Q9ULK4 1368 aa7.5□□□□□ -1.21
PRKCH-220ENST00000556164 GPR25O00155 361 aa7.5□□□□□ -1.21
PRKCH-220ENST00000556164 ELL2O00472 640 aaPredicted RBP7.5□□□□□ -1.21
PRKCH-220ENST00000556164 SREBF2Q12772 1141 aa7.5□□□□□ -1.21
PRKCH-220ENST00000556164 PRKG1Q13976 671 aa7.5□□□□□ -1.21
PRKCH-220ENST00000556164 OGFOD1Q8N543 542 aa7.5□□□□□ -1.21
PRKCH-220ENST00000556164 CDC5LQ99459 802 aaKnown RBP7.5□□□□□ -1.21
PRKCH-220ENST00000556164 MXD3Q9BW11 206 aa7.5□□□□□ -1.21
PRKCH-220ENST00000556164 MYBBP1AQ9BQG0 1328 aaKnown RBP7.5□□□□□ -1.21
PRKCH-220ENST00000556164 LAMB1P07942 1786 aa7.49□□□□□ -1.21
PRKCH-220ENST00000556164 WTIPA6NIX2 430 aaPredicted RBP7.49□□□□□ -1.21
PRKCH-220ENST00000556164 SPDYE5A6NIY4 337 aa7.49□□□□□ -1.21
PRKCH-220ENST00000556164 WNT10BO00744 389 aa7.49□□□□□ -1.21
PRKCH-220ENST00000556164 FKTNO75072 461 aa7.49□□□□□ -1.21
PRKCH-220ENST00000556164 SASH1O94885 1247 aa7.49□□□□□ -1.21
PRKCH-220ENST00000556164 BRD1O95696 1058 aa7.49□□□□□ -1.21
PRKCH-220ENST00000556164 DDX58O95786 925 aaKnown RBP7.49□□□□□ -1.21
PRKCH-220ENST00000556164 PRR29P0C7W0 189 aa7.49□□□□□ -1.21
PRKCH-220ENST00000556164 TM4SF4P48230 202 aa7.49□□□□□ -1.21
PRKCH-220ENST00000556164 CTSWP56202 376 aa7.49□□□□□ -1.21
PRKCH-220ENST00000556164 DACT2Q5SW24 774 aa7.49□□□□□ -1.21
PRKCH-220ENST00000556164 FBXO46Q6PJ61 603 aaPredicted RBP7.49□□□□□ -1.21
PRKCH-220ENST00000556164 ARMC9Q7Z3E5 817 aa7.49□□□□□ -1.21
PRKCH-220ENST00000556164 EFCAB3Q8N7B9 438 aa7.49□□□□□ -1.21
PRKCH-220ENST00000556164 POM121Q96HA1 1249 aa7.49□□□□□ -1.21
PRKCH-220ENST00000556164 METTL22Q9BUU2 404 aaPredicted RBP7.49□□□□□ -1.21
PRKCH-220ENST00000556164 MYO3BQ8WXR4 1341 aa7.49□□□□□ -1.21
PRKCH-220ENST00000556164 A0A1B0GUL6 1792 aa7.48□□□□□ -1.21
PRKCH-220ENST00000556164 RBBP6Q7Z6E9 1792 aaKnown RBP7.48□□□□□ -1.21
PRKCH-220ENST00000556164 CCT4P50991 539 aaKnown RBP7.48□□□□□ -1.21
PRKCH-220ENST00000556164 PTPN12Q05209 780 aaKnown RBP7.48□□□□□ -1.21
PRKCH-220ENST00000556164 NOM1Q5C9Z4 860 aaKnown RBP7.48□□□□□ -1.21
PRKCH-220ENST00000556164 STRIP1Q5VSL9 837 aa7.48□□□□□ -1.21
PRKCH-220ENST00000556164 APOBEC3FQ8IUX4 373 aaKnown RBP7.48□□□□□ -1.21
PRKCH-220ENST00000556164 R3HDMLQ9H3Y0 253 aa7.48□□□□□ -1.21
PRKCH-220ENST00000556164 GREM2Q9H772 168 aa7.48□□□□□ -1.21
PRKCH-220ENST00000556164 IFT57Q9NWB7 429 aa7.48□□□□□ -1.21
PRKCH-220ENST00000556164 PCDHB8Q9UN66 801 aa7.48□□□□□ -1.21
PRKCH-220ENST00000556164 ANGEL1Q9UNK9 670 aaKnown RBP7.48□□□□□ -1.21
PRKCH-220ENST00000556164 MINPP1Q9UNW1 487 aa7.48□□□□□ -1.21
PRKCH-220ENST00000556164 ADAMTS8Q9UP79 889 aa7.48□□□□□ -1.21
PRKCH-220ENST00000556164 MAP3K2Q9Y2U5 619 aa7.48□□□□□ -1.21
PRKCH-220ENST00000556164 PCDHB13Q9Y5F0 798 aa7.48□□□□□ -1.21
PRKCH-220ENST00000556164 KIAA0100Q14667 2235 aaKnown RBP7.47□□□□□ -1.21
PRKCH-220ENST00000556164 ZNF853P0CG23 659 aa7.47□□□□□ -1.21
PRKCH-220ENST00000556164 GNAI1P63096 354 aa7.47□□□□□ -1.21
PRKCH-220ENST00000556164 CALD1Q05682 793 aaKnown RBP7.47□□□□□ -1.21
PRKCH-220ENST00000556164 CCDC30Q5VVM6 783 aa7.47□□□□□ -1.21
PRKCH-220ENST00000556164 SPRYD7Q5W111 196 aa7.47□□□□□ -1.21
PRKCH-220ENST00000556164 TXNRD3Q86VQ6 643 aa7.47□□□□□ -1.21
PRKCH-220ENST00000556164 KIAA0825Q8IV33 1275 aa7.47□□□□□ -1.21
PRKCH-220ENST00000556164 TTLL11Q8NHH1 800 aa7.47□□□□□ -1.21
PRKCH-220ENST00000556164 COA1Q9GZY4 146 aa7.47□□□□□ -1.21
PRKCH-220ENST00000556164 BSDC1Q9NW68 430 aaPredicted RBP7.47□□□□□ -1.21
PRKCH-220ENST00000556164 FZD1Q9UP38 647 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms