RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 PIP4K2BP78356 416 aa10.11□□□□□ -0.79
ATXN3-235ENST00000556082 FOXO4P98177 505 aa10.11□□□□□ -0.79
ATXN3-235ENST00000556082 RABEP1Q15276 862 aa10.11□□□□□ -0.79
ATXN3-235ENST00000556082 DIXDC1Q155Q3 683 aa10.11□□□□□ -0.79
ATXN3-235ENST00000556082 VPS72Q15906 364 aa10.11□□□□□ -0.79
ATXN3-235ENST00000556082 UBE3BQ7Z3V4 1068 aa10.11□□□□□ -0.79
ATXN3-235ENST00000556082 FNBP4Q8N3X1 1017 aaPredicted RBP10.11□□□□□ -0.79
ATXN3-235ENST00000556082 ZC3H15Q8WU90 426 aaKnown RBP10.11□□□□□ -0.79
ATXN3-235ENST00000556082 ESYT1Q9BSJ8 1104 aa10.11□□□□□ -0.79
ATXN3-235ENST00000556082 SPATA31A6Q5VVP1 1343 aa10.1□□□□□ -0.79
ATXN3-235ENST00000556082 ERVV-1B6SEH8 477 aa10.1□□□□□ -0.79
ATXN3-235ENST00000556082 IFIT2P09913 472 aaKnown RBP10.1□□□□□ -0.79
ATXN3-235ENST00000556082 FDX1P10109 184 aa10.1□□□□□ -0.79
ATXN3-235ENST00000556082 IL6STP40189 918 aaPredicted RBP10.1□□□□□ -0.79
ATXN3-235ENST00000556082 PTPN12Q05209 780 aaKnown RBP10.1□□□□□ -0.79
ATXN3-235ENST00000556082 HSP90AB3PQ58FF7 597 aa10.1□□□□□ -0.79
ATXN3-235ENST00000556082 KIF6Q6ZMV9 814 aa10.1□□□□□ -0.79
ATXN3-235ENST00000556082 TICAM2Q86XR7 235 aa10.1□□□□□ -0.79
ATXN3-235ENST00000556082 MARCH10Q8NA82 808 aaPredicted RBP10.1□□□□□ -0.79
ATXN3-235ENST00000556082 HLA-CQ95604 372 aa10.1□□□□□ -0.79
ATXN3-235ENST00000556082 ZNF775Q96BV0 537 aaPredicted RBP10.1□□□□□ -0.79
ATXN3-235ENST00000556082 SLC4A9Q96Q91 983 aa10.1□□□□□ -0.79
ATXN3-235ENST00000556082 PLA2G12BQ9BX93 195 aa10.1□□□□□ -0.79
ATXN3-235ENST00000556082 ANTXR1Q9H6X2 564 aa10.1□□□□□ -0.79
ATXN3-235ENST00000556082 PA2G4Q9UQ80 394 aaKnown RBP10.1□□□□□ -0.79
ATXN3-235ENST00000556082 MAP3K15Q6ZN16 1313 aa10.09□□□□□ -0.79
ATXN3-235ENST00000556082 SPDYE5A6NIY4 337 aa10.09□□□□□ -0.79
ATXN3-235ENST00000556082 NUTM2BA6NNL0 878 aaPredicted RBP10.09□□□□□ -0.79
ATXN3-235ENST00000556082 NUTM2EB1AL46 878 aaPredicted RBP10.09□□□□□ -0.79
ATXN3-235ENST00000556082 AXIN1O15169 862 aa10.09□□□□□ -0.79
ATXN3-235ENST00000556082 GJA5P36382 358 aa10.09□□□□□ -0.79
ATXN3-235ENST00000556082 ANAPC15P60006 121 aa10.09□□□□□ -0.79
ATXN3-235ENST00000556082 GIGYF2Q6Y7W6 1299 aaKnown RBP10.09□□□□□ -0.79
ATXN3-235ENST00000556082 NUTM2AQ8IVF1 878 aaPredicted RBP10.09□□□□□ -0.79
ATXN3-235ENST00000556082 HSCBQ8IWL3 235 aa10.09□□□□□ -0.79
ATXN3-235ENST00000556082 CNTROBQ8N137 903 aa10.09□□□□□ -0.79
ATXN3-235ENST00000556082 CCDC24Q8N4L8 307 aa10.09□□□□□ -0.79
ATXN3-235ENST00000556082 SMARCC1Q92922 1105 aaPredicted RBP10.09□□□□□ -0.79
ATXN3-235ENST00000556082 EAF2Q96CJ1 260 aaPredicted RBP10.09□□□□□ -0.79
ATXN3-235ENST00000556082 GPR108Q9NPR9 543 aa10.09□□□□□ -0.79
ATXN3-235ENST00000556082 ARFGEF2Q9Y6D5 1785 aa10.09□□□□□ -0.79
ATXN3-235ENST00000556082 WNK3Q9BYP7 1800 aa10.08□□□□□ -0.8
ATXN3-235ENST00000556082 CIAO1O76071 339 aa10.08□□□□□ -0.8
ATXN3-235ENST00000556082 PCCAP05165 728 aaPredicted RBP10.08□□□□□ -0.8
ATXN3-235ENST00000556082 TTLL12Q14166 644 aaPredicted RBP10.08□□□□□ -0.8
ATXN3-235ENST00000556082 TSHZ3Q63HK5 1081 aa10.08□□□□□ -0.8
ATXN3-235ENST00000556082 AACSQ86V21 672 aa10.08□□□□□ -0.8
ATXN3-235ENST00000556082 EVI5LQ96CN4 794 aa10.08□□□□□ -0.8
ATXN3-235ENST00000556082 ZBTB3Q9H5J0 574 aa10.08□□□□□ -0.8
ATXN3-235ENST00000556082 CDHR2Q9BYE9 1310 aa10.07□□□□□ -0.8
ATXN3-235ENST00000556082 BCL9LQ86UU0 1499 aa10.07□□□□□ -0.8
ATXN3-235ENST00000556082 HIP1O00291 1037 aa10.07□□□□□ -0.8
ATXN3-235ENST00000556082 CSF1RP07333 972 aa10.07□□□□□ -0.8
ATXN3-235ENST00000556082 LMBR1LQ6UX01 489 aa10.07□□□□□ -0.8
ATXN3-235ENST00000556082 ZBTB38Q8NAP3 1195 aaPredicted RBP10.07□□□□□ -0.8
ATXN3-235ENST00000556082 SPIRE2Q8WWL2 714 aa10.07□□□□□ -0.8
ATXN3-235ENST00000556082 RILPL2Q969X0 211 aa10.07□□□□□ -0.8
ATXN3-235ENST00000556082 MRGPRX2Q96LB1 330 aa10.07□□□□□ -0.8
ATXN3-235ENST00000556082 BCL11AQ9H165 835 aa10.07□□□□□ -0.8
ATXN3-235ENST00000556082 SNRKQ9NRH2 765 aa10.07□□□□□ -0.8
ATXN3-235ENST00000556082 ITGB4P16144 1822 aa10.07□□□□□ -0.8
ATXN3-235ENST00000556082 NUP188Q5SRE5 1749 aa10.07□□□□□ -0.8
ATXN3-235ENST00000556082 TUBGCP6Q96RT7 1819 aa10.06□□□□□ -0.8
ATXN3-235ENST00000556082 ST8SIA5O15466 376 aa10.06□□□□□ -0.8
ATXN3-235ENST00000556082 SGSM2O43147 1006 aa10.06□□□□□ -0.8
ATXN3-235ENST00000556082 ATP5JP18859 108 aa10.06□□□□□ -0.8
ATXN3-235ENST00000556082 MCCP23508 829 aa10.06□□□□□ -0.8
ATXN3-235ENST00000556082 IL15P40933 162 aaPredicted RBP10.06□□□□□ -0.8
ATXN3-235ENST00000556082 EIF5P55010 431 aaKnown RBP10.06□□□□□ -0.8
ATXN3-235ENST00000556082 INTS5Q6P9B9 1019 aaKnown RBP10.06□□□□□ -0.8
ATXN3-235ENST00000556082 RUFY2Q8WXA3 655 aa10.06□□□□□ -0.8
ATXN3-235ENST00000556082 NGLY1Q96IV0 654 aa10.06□□□□□ -0.8
ATXN3-235ENST00000556082 AK7Q96M32 723 aa10.06□□□□□ -0.8
ATXN3-235ENST00000556082 NUDT12Q9BQG2 462 aa10.06□□□□□ -0.8
ATXN3-235ENST00000556082 LOC102724428A0A0B4J2F2 783 aa10.05□□□□□ -0.8
ATXN3-235ENST00000556082 C6orf229H3BNL8 230 aa10.05□□□□□ -0.8
ATXN3-235ENST00000556082 K7ELQ4 463 aaPredicted RBP10.05□□□□□ -0.8
ATXN3-235ENST00000556082 EYA2O00167 538 aa10.05□□□□□ -0.8
ATXN3-235ENST00000556082 DDIT3P35638 169 aa10.05□□□□□ -0.8
ATXN3-235ENST00000556082 SIK1P57059 783 aa10.05□□□□□ -0.8
ATXN3-235ENST00000556082 GUCA2AQ02747 115 aa10.05□□□□□ -0.8
ATXN3-235ENST00000556082 TNNI3KQ59H18 835 aa10.05□□□□□ -0.8
ATXN3-235ENST00000556082 RC3H1Q5TC82 1133 aaKnown RBP10.05□□□□□ -0.8
ATXN3-235ENST00000556082 DESI1Q6ICB0 168 aa10.05□□□□□ -0.8
ATXN3-235ENST00000556082 ATG9AQ7Z3C6 839 aa10.05□□□□□ -0.8
ATXN3-235ENST00000556082 NLRP10Q86W26 655 aa10.05□□□□□ -0.8
ATXN3-235ENST00000556082 JARID2Q92833 1246 aaPredicted RBP10.05□□□□□ -0.8
ATXN3-235ENST00000556082 SYTL4Q96C24 671 aaPredicted RBP10.05□□□□□ -0.8
ATXN3-235ENST00000556082 CHMP5Q9NZZ3 219 aa10.05□□□□□ -0.8
ATXN3-235ENST00000556082 FPGT-TNNI3KV9GXZ4 949 aa10.05□□□□□ -0.8
ATXN3-235ENST00000556082 CICQ96RK0 1608 aaPredicted RBP10.04□□□□□ -0.8
ATXN3-235ENST00000556082 POTECB2RU33 542 aa10.04□□□□□ -0.8
ATXN3-235ENST00000556082 SMPD1P17405 629 aa10.04□□□□□ -0.8
ATXN3-235ENST00000556082 HSPA4P34932 840 aa10.04□□□□□ -0.8
ATXN3-235ENST00000556082 MCM2P49736 904 aa10.04□□□□□ -0.8
ATXN3-235ENST00000556082 TFCP2Q12800 502 aa10.04□□□□□ -0.8
ATXN3-235ENST00000556082 HLFQ16534 295 aa10.04□□□□□ -0.8
ATXN3-235ENST00000556082 ZNF34Q8IZ26 560 aa10.04□□□□□ -0.8
ATXN3-235ENST00000556082 KLHDC4Q8TBB5 520 aa10.04□□□□□ -0.8
ATXN3-235ENST00000556082 SYMPKQ92797 1274 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms