RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 INPP5BP32019 993 aa16.76■□□□□ 0.27
SIX1-205ENST00000555955 RHOXF2Q9BQY4 288 aa16.76■□□□□ 0.27
SIX1-205ENST00000555955 RBM28Q9NW13 759 aaKnown RBP16.76■□□□□ 0.27
SIX1-205ENST00000555955 ZFYVE9O95405 1425 aa16.75■□□□□ 0.27
SIX1-205ENST00000555955 LRRIQ3A6PVS8 624 aaPredicted RBP16.75■□□□□ 0.27
SIX1-205ENST00000555955 BIN1O00499 593 aa16.75■□□□□ 0.27
SIX1-205ENST00000555955 PAX7P23759 505 aa16.75■□□□□ 0.27
SIX1-205ENST00000555955 GPTP24298 496 aa16.75■□□□□ 0.27
SIX1-205ENST00000555955 VSNL1P62760 191 aa16.75■□□□□ 0.27
SIX1-205ENST00000555955 ANKRD1Q15327 319 aa16.75■□□□□ 0.27
SIX1-205ENST00000555955 POTEDQ86YR6 584 aa16.75■□□□□ 0.27
SIX1-205ENST00000555955 TBC1D22AQ8WUA7 517 aa16.75■□□□□ 0.27
SIX1-205ENST00000555955 KCNB2Q92953 911 aa16.75■□□□□ 0.27
SIX1-205ENST00000555955 FAXDC2Q96IV6 333 aa16.75■□□□□ 0.27
SIX1-205ENST00000555955 RABEP2Q9H5N1 569 aa16.75■□□□□ 0.27
SIX1-205ENST00000555955 TMEM131LA2VDJ0 1609 aa16.75■□□□□ 0.27
SIX1-205ENST00000555955 ME1P48163 572 aa16.75■□□□□ 0.27
SIX1-205ENST00000555955 UBASH3AP57075 661 aa16.75■□□□□ 0.27
SIX1-205ENST00000555955 NCAPHQ15003 741 aa16.75■□□□□ 0.27
SIX1-205ENST00000555955 PTPN21Q16825 1174 aa16.75■□□□□ 0.27
SIX1-205ENST00000555955 CABS1Q96KC9 395 aa16.75■□□□□ 0.27
SIX1-205ENST00000555955 KIAA1468Q9P260 1216 aa16.75■□□□□ 0.27
SIX1-205ENST00000555955 PSMA5P28066 241 aa16.74■□□□□ 0.27
SIX1-205ENST00000555955 CREB3L3Q68CJ9 461 aa16.74■□□□□ 0.27
SIX1-205ENST00000555955 CTCFLQ8NI51 663 aaPredicted RBP16.74■□□□□ 0.27
SIX1-205ENST00000555955 VEZTQ9HBM0 779 aa16.74■□□□□ 0.27
SIX1-205ENST00000555955 KIF3CO14782 793 aa16.74■□□□□ 0.27
SIX1-205ENST00000555955 SERPINC1P01008 464 aa16.74■□□□□ 0.27
SIX1-205ENST00000555955 TOP1P11387 765 aaKnown RBP16.74■□□□□ 0.27
SIX1-205ENST00000555955 RDXP35241 583 aaKnown RBP16.74■□□□□ 0.27
SIX1-205ENST00000555955 ADD1P35611 737 aaKnown RBP16.74■□□□□ 0.27
SIX1-205ENST00000555955 KARSQ15046 597 aaKnown RBP16.74■□□□□ 0.27
SIX1-205ENST00000555955 CFAP100Q494V2 611 aa16.74■□□□□ 0.27
SIX1-205ENST00000555955 BLOC1S2Q6QNY1 142 aa16.74■□□□□ 0.27
SIX1-205ENST00000555955 JMYQ8N9B5 988 aa16.74■□□□□ 0.27
SIX1-205ENST00000555955 PRPF38AQ8NAV1 312 aaKnown RBP16.74■□□□□ 0.27
SIX1-205ENST00000555955 N4BP2L2Q92802 583 aaPredicted RBP16.74■□□□□ 0.27
SIX1-205ENST00000555955 GBP3Q9H0R5 595 aa16.74■□□□□ 0.27
SIX1-205ENST00000555955 TMEM139Q8IV31 216 aa16.74■□□□□ 0.27
SIX1-205ENST00000555955 CEP112Q8N8E3 955 aa16.74■□□□□ 0.27
SIX1-205ENST00000555955 DPF2Q92785 391 aa16.74■□□□□ 0.27
SIX1-205ENST00000555955 IRX2Q9BZI1 471 aaPredicted RBP16.74■□□□□ 0.27
SIX1-205ENST00000555955 RBM8AQ9Y5S9 174 aaKnown RBP16.74■□□□□ 0.27
SIX1-205ENST00000555955 TOGARAM2Q6ZUX3 1019 aa16.73■□□□□ 0.27
SIX1-205ENST00000555955 SMARCC1Q92922 1105 aaPredicted RBP16.73■□□□□ 0.27
SIX1-205ENST00000555955 BAG1Q99933 345 aaPredicted RBP16.73■□□□□ 0.27
SIX1-205ENST00000555955 CAPN7Q9Y6W3 813 aa16.73■□□□□ 0.27
SIX1-205ENST00000555955 SOS1Q07889 1333 aaPredicted RBP16.73■□□□□ 0.27
SIX1-205ENST00000555955 CD163L1Q9NR16 1453 aa16.73■□□□□ 0.27
SIX1-205ENST00000555955 H0YHG0 523 aa16.73■□□□□ 0.27
SIX1-205ENST00000555955 CHL1O00533 1208 aa16.73■□□□□ 0.27
SIX1-205ENST00000555955 SURF6O75683 361 aaKnown RBP16.73■□□□□ 0.27
SIX1-205ENST00000555955 DLG5Q8TDM6 1919 aa16.73■□□□□ 0.27
SIX1-205ENST00000555955 NF2P35240 595 aa16.72■□□□□ 0.27
SIX1-205ENST00000555955 USP28Q96RU2 1077 aa16.72■□□□□ 0.27
SIX1-205ENST00000555955 RPGRIP1LQ68CZ1 1315 aa16.72■□□□□ 0.27
SIX1-205ENST00000555955 SYF2O95926 243 aaKnown RBP16.72■□□□□ 0.27
SIX1-205ENST00000555955 IL13P35225 146 aa16.72■□□□□ 0.27
SIX1-205ENST00000555955 SARNPP82979 210 aaKnown RBP16.72■□□□□ 0.27
SIX1-205ENST00000555955 ATP2B2Q01814 1243 aa16.72■□□□□ 0.27
SIX1-205ENST00000555955 FMR1NBQ8N0W7 255 aaPredicted RBP16.72■□□□□ 0.27
SIX1-205ENST00000555955 IGSF22Q8N9C0 903 aa16.72■□□□□ 0.27
SIX1-205ENST00000555955 CDC23Q9UJX2 597 aa16.72■□□□□ 0.27
SIX1-205ENST00000555955 ANKRD26Q9UPS8 1709 aa16.71■□□□□ 0.27
SIX1-205ENST00000555955 A0A1B0GVL5 298 aa16.71■□□□□ 0.27
SIX1-205ENST00000555955 CBFA2T2O43439 604 aa16.71■□□□□ 0.27
SIX1-205ENST00000555955 PRPF6O94906 941 aaKnown RBP16.71■□□□□ 0.27
SIX1-205ENST00000555955 DDR1Q08345 913 aa16.71■□□□□ 0.27
SIX1-205ENST00000555955 TOB2Q14106 344 aaPredicted RBP16.71■□□□□ 0.27
SIX1-205ENST00000555955 C11orf91Q3C1V1 193 aa16.71■□□□□ 0.27
SIX1-205ENST00000555955 CD248Q9HCU0 757 aa16.71■□□□□ 0.27
SIX1-205ENST00000555955 MCM8Q9UJA3 840 aa16.71■□□□□ 0.27
SIX1-205ENST00000555955 MYO5BQ9ULV0 1848 aa16.71■□□□□ 0.27
SIX1-205ENST00000555955 RHPN1Q8TCX5 695 aa16.71■□□□□ 0.27
SIX1-205ENST00000555955 DESI2Q9BSY9 194 aa16.71■□□□□ 0.27
SIX1-205ENST00000555955 RIMS1Q86UR5 1692 aaKnown RBP16.71■□□□□ 0.27
SIX1-205ENST00000555955 MYO1FO00160 1098 aa16.7■□□□□ 0.26
SIX1-205ENST00000555955 FOSBP53539 338 aa16.7■□□□□ 0.26
SIX1-205ENST00000555955 VSTM4Q8IW00 320 aa16.7■□□□□ 0.26
SIX1-205ENST00000555955 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.7■□□□□ 0.26
SIX1-205ENST00000555955 PDILTQ8N807 584 aa16.7■□□□□ 0.26
SIX1-205ENST00000555955 ZKSCAN4Q969J2 545 aaPredicted RBP16.7■□□□□ 0.26
SIX1-205ENST00000555955 EMILIN1Q9Y6C2 1016 aa16.7■□□□□ 0.26
SIX1-205ENST00000555955 SETD1AO15047 1707 aaKnown RBP16.7■□□□□ 0.26
SIX1-205ENST00000555955 TMEM232C9JQI7 657 aa16.7■□□□□ 0.26
SIX1-205ENST00000555955 HDGFL2Q7Z4V5 671 aaPredicted RBP16.7■□□□□ 0.26
SIX1-205ENST00000555955 MRPS27Q92552 414 aaKnown RBP16.7■□□□□ 0.26
SIX1-205ENST00000555955 ZBTB12Q9Y330 459 aaPredicted RBP16.7■□□□□ 0.26
SIX1-205ENST00000555955 CHUKO15111 745 aa16.69■□□□□ 0.26
SIX1-205ENST00000555955 RPS6KB1P23443 525 aa16.69■□□□□ 0.26
SIX1-205ENST00000555955 IRAK1P51617 712 aa16.69■□□□□ 0.26
SIX1-205ENST00000555955 INHBEP58166 350 aa16.69■□□□□ 0.26
SIX1-205ENST00000555955 TUBB4BP68371 445 aa16.69■□□□□ 0.26
SIX1-205ENST00000555955 TEX11Q8IYF3 940 aa16.69■□□□□ 0.26
SIX1-205ENST00000555955 BCAS4Q8TDM0 211 aa16.69■□□□□ 0.26
SIX1-205ENST00000555955 KAT14Q9H8E8 782 aa16.69■□□□□ 0.26
SIX1-205ENST00000555955 SLC27A2O14975 620 aa16.69■□□□□ 0.26
SIX1-205ENST00000555955 STX10O60499 249 aa16.69■□□□□ 0.26
SIX1-205ENST00000555955 GCFC2P16383 781 aaKnown RBP16.69■□□□□ 0.26
SIX1-205ENST00000555955 NLRP12P59046 1061 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms