RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 KIAA1024Q9UPX6 916 aa9.9□□□□□ -0.82
SUPT16H-204ENST00000555943 PCDHGA11Q9Y5H2 935 aa9.9□□□□□ -0.82
SUPT16H-204ENST00000555943 LY75O60449 1722 aa9.9□□□□□ -0.83
SUPT16H-204ENST00000555943 DOT1LQ8TEK3 1739 aa9.9□□□□□ -0.83
SUPT16H-204ENST00000555943 ZBTB7BO15156 539 aaPredicted RBP9.89□□□□□ -0.83
SUPT16H-204ENST00000555943 CYP27B1O15528 508 aa9.89□□□□□ -0.83
SUPT16H-204ENST00000555943 LILRA1O75019 489 aa9.89□□□□□ -0.83
SUPT16H-204ENST00000555943 ATP1A2P50993 1020 aa9.89□□□□□ -0.83
SUPT16H-204ENST00000555943 CCDC27Q2M243 656 aa9.89□□□□□ -0.83
SUPT16H-204ENST00000555943 CC2D2BQ6DHV5 1058 aa9.89□□□□□ -0.83
SUPT16H-204ENST00000555943 MPRIPQ6WCQ1 1025 aa9.89□□□□□ -0.83
SUPT16H-204ENST00000555943 SLC16A10Q8TF71 515 aa9.89□□□□□ -0.83
SUPT16H-204ENST00000555943 ZNF594Q96JF6 807 aaPredicted RBP9.89□□□□□ -0.83
SUPT16H-204ENST00000555943 DCAF5Q96JK2 942 aa9.89□□□□□ -0.83
SUPT16H-204ENST00000555943 CARNS1A5YM72 827 aa9.88□□□□□ -0.83
SUPT16H-204ENST00000555943 RNMTO43148 476 aaKnown RBP9.88□□□□□ -0.83
SUPT16H-204ENST00000555943 ZBTB7AO95365 584 aa9.88□□□□□ -0.83
SUPT16H-204ENST00000555943 PDIA4P13667 645 aaKnown RBP9.88□□□□□ -0.83
SUPT16H-204ENST00000555943 PRR20EP86478 221 aa9.88□□□□□ -0.83
SUPT16H-204ENST00000555943 PRR20CP86479 221 aa9.88□□□□□ -0.83
SUPT16H-204ENST00000555943 PRR20DP86480 221 aa9.88□□□□□ -0.83
SUPT16H-204ENST00000555943 PRR20BP86481 221 aa9.88□□□□□ -0.83
SUPT16H-204ENST00000555943 PRR20AP86496 221 aa9.88□□□□□ -0.83
SUPT16H-204ENST00000555943 TEFQ10587 303 aa9.88□□□□□ -0.83
SUPT16H-204ENST00000555943 DCTN1Q14203 1278 aa9.88□□□□□ -0.83
SUPT16H-204ENST00000555943 MCM10Q7L590 875 aa9.88□□□□□ -0.83
SUPT16H-204ENST00000555943 STK32AQ8WU08 396 aa9.88□□□□□ -0.83
SUPT16H-204ENST00000555943 USTQ9Y2C2 406 aa9.88□□□□□ -0.83
SUPT16H-204ENST00000555943 ZBED9Q6R2W3 1325 aa9.87□□□□□ -0.83
SUPT16H-204ENST00000555943 RGS20O76081 388 aa9.87□□□□□ -0.83
SUPT16H-204ENST00000555943 DKK1O94907 266 aa9.87□□□□□ -0.83
SUPT16H-204ENST00000555943 SMPD1P17405 629 aa9.87□□□□□ -0.83
SUPT16H-204ENST00000555943 CABP4P57796 275 aa9.87□□□□□ -0.83
SUPT16H-204ENST00000555943 ANKMY2Q8IV38 441 aa9.87□□□□□ -0.83
SUPT16H-204ENST00000555943 WDR63Q8IWG1 891 aa9.87□□□□□ -0.83
SUPT16H-204ENST00000555943 LARGE2Q8N3Y3 721 aa9.87□□□□□ -0.83
SUPT16H-204ENST00000555943 SYTL4Q96C24 671 aaPredicted RBP9.87□□□□□ -0.83
SUPT16H-204ENST00000555943 TRAIPQ9BWF2 469 aa9.87□□□□□ -0.83
SUPT16H-204ENST00000555943 OSBPL3Q9H4L5 887 aa9.87□□□□□ -0.83
SUPT16H-204ENST00000555943 LGR6Q9HBX8 967 aa9.87□□□□□ -0.83
SUPT16H-204ENST00000555943 PGPEP1Q9NXJ5 209 aa9.87□□□□□ -0.83
SUPT16H-204ENST00000555943 LAS1LQ9Y4W2 734 aaKnown RBP9.87□□□□□ -0.83
SUPT16H-204ENST00000555943 TMEM88BA6NKF7 163 aa9.86□□□□□ -0.83
SUPT16H-204ENST00000555943 ERVV-2B6SEH9 535 aa9.86□□□□□ -0.83
SUPT16H-204ENST00000555943 DPYDQ12882 1025 aa9.86□□□□□ -0.83
SUPT16H-204ENST00000555943 COL24A1Q17RW2 1714 aa9.86□□□□□ -0.83
SUPT16H-204ENST00000555943 TMEM164Q5U3C3 297 aa9.86□□□□□ -0.83
SUPT16H-204ENST00000555943 SIX5Q8N196 739 aa9.86□□□□□ -0.83
SUPT16H-204ENST00000555943 IL17REQ8NFR9 667 aa9.86□□□□□ -0.83
SUPT16H-204ENST00000555943 THUMPD2Q9BTF0 503 aaKnown RBP9.86□□□□□ -0.83
SUPT16H-204ENST00000555943 PDGFDQ9GZP0 370 aaPredicted RBP9.86□□□□□ -0.83
SUPT16H-204ENST00000555943 LRRC4BQ9NT99 713 aa9.86□□□□□ -0.83
SUPT16H-204ENST00000555943 PKD1L3Q7Z443 1732 aa9.85□□□□□ -0.83
SUPT16H-204ENST00000555943 ADD1P35611 737 aaKnown RBP9.85□□□□□ -0.83
SUPT16H-204ENST00000555943 GNAI1P63096 354 aa9.85□□□□□ -0.83
SUPT16H-204ENST00000555943 TAF7Q15545 349 aaPredicted RBP9.85□□□□□ -0.83
SUPT16H-204ENST00000555943 CCDC102BQ68D86 513 aa9.85□□□□□ -0.83
SUPT16H-204ENST00000555943 TPCN2Q8NHX9 752 aa9.85□□□□□ -0.83
SUPT16H-204ENST00000555943 KLF16Q9BXK1 252 aaPredicted RBP9.85□□□□□ -0.83
SUPT16H-204ENST00000555943 SLC52A2Q9HAB3 445 aa9.85□□□□□ -0.83
SUPT16H-204ENST00000555943 TMOD3Q9NYL9 352 aa9.85□□□□□ -0.83
SUPT16H-204ENST00000555943 BTBD11A6QL63 1104 aa9.84□□□□□ -0.83
SUPT16H-204ENST00000555943 POLD1P28340 1107 aa9.84□□□□□ -0.83
SUPT16H-204ENST00000555943 ZNF827Q17R98 1081 aa9.84□□□□□ -0.83
SUPT16H-204ENST00000555943 FAM200AQ8TCP9 573 aa9.84□□□□□ -0.83
SUPT16H-204ENST00000555943 ITPKCQ96DU7 683 aa9.84□□□□□ -0.83
SUPT16H-204ENST00000555943 SYT17Q9BSW7 474 aa9.84□□□□□ -0.83
SUPT16H-204ENST00000555943 FHDC1Q9C0D6 1143 aaPredicted RBP9.84□□□□□ -0.83
SUPT16H-204ENST00000555943 MYH16Q9H6N6 1097 aa9.84□□□□□ -0.83
SUPT16H-204ENST00000555943 CHD4Q14839 1912 aa9.84□□□□□ -0.83
SUPT16H-204ENST00000555943 IL16Q14005 1332 aa9.83□□□□□ -0.84
SUPT16H-204ENST00000555943 E9PSI1 815 aa9.83□□□□□ -0.84
SUPT16H-204ENST00000555943 C1QTNF8P60827 252 aa9.83□□□□□ -0.84
SUPT16H-204ENST00000555943 PDE4CQ08493 712 aa9.83□□□□□ -0.84
SUPT16H-204ENST00000555943 IFT57Q9NWB7 429 aa9.83□□□□□ -0.84
SUPT16H-204ENST00000555943 TFCP2L1Q9NZI6 479 aa9.83□□□□□ -0.84
SUPT16H-204ENST00000555943 TSPYL4Q9UJ04 414 aa9.83□□□□□ -0.84
SUPT16H-204ENST00000555943 CCNL1Q9UK58 526 aaPredicted RBP9.83□□□□□ -0.84
SUPT16H-204ENST00000555943 ITGB4P16144 1822 aa9.83□□□□□ -0.84
SUPT16H-204ENST00000555943 TUBGCP6Q96RT7 1819 aa9.83□□□□□ -0.84
SUPT16H-204ENST00000555943 CEMIPQ8WUJ3 1361 aa9.83□□□□□ -0.84
SUPT16H-204ENST00000555943 ZNF521Q96K83 1311 aa9.82□□□□□ -0.84
SUPT16H-204ENST00000555943 KDM6AO15550 1401 aaPredicted RBP9.82□□□□□ -0.84
SUPT16H-204ENST00000555943 ZIC2O95409 532 aaPredicted RBP9.82□□□□□ -0.84
SUPT16H-204ENST00000555943 STAU1O95793 577 aaKnown RBP9.82□□□□□ -0.84
SUPT16H-204ENST00000555943 WDR4P57081 412 aaKnown RBP9.82□□□□□ -0.84
SUPT16H-204ENST00000555943 CBLBQ13191 982 aa9.82□□□□□ -0.84
SUPT16H-204ENST00000555943 TTC5Q8N0Z6 440 aa9.82□□□□□ -0.84
SUPT16H-204ENST00000555943 FLAD1Q8NFF5 587 aa9.82□□□□□ -0.84
SUPT16H-204ENST00000555943 SMARCC1Q92922 1105 aaPredicted RBP9.82□□□□□ -0.84
SUPT16H-204ENST00000555943 ZFAND3Q9H8U3 227 aa9.82□□□□□ -0.84
SUPT16H-204ENST00000555943 BABAM1Q9NWV8 329 aa9.82□□□□□ -0.84
SUPT16H-204ENST00000555943 C5P01031 1676 aa9.82□□□□□ -0.84
SUPT16H-204ENST00000555943 TAF1LQ8IZX4 1826 aa9.82□□□□□ -0.84
SUPT16H-204ENST00000555943 PNPLA7Q6ZV29 1317 aa9.82□□□□□ -0.84
SUPT16H-204ENST00000555943 SFI1A8K8P3 1242 aa9.81□□□□□ -0.84
SUPT16H-204ENST00000555943 CHL1O00533 1208 aa9.81□□□□□ -0.84
SUPT16H-204ENST00000555943 TIMP2P16035 220 aa9.81□□□□□ -0.84
SUPT16H-204ENST00000555943 CYP2U1Q7Z449 544 aa9.81□□□□□ -0.84
SUPT16H-204ENST00000555943 HPS1Q92902 700 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms