RNA–Protein interactions for RNA: ENST00000555914.5

HNRNPC-222, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

APPRIS ALT1 TSL 5 BASIC

Gene HNRNPC, Length 1,658 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-222	ENST00000555914	GTF2I	P78347	998 aa		11.27	□□□□□ -0.61
HNRNPC-222	ENST00000555914	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.27	□□□□□ -0.61
HNRNPC-222	ENST00000555914	KIAA0825	Q8IV33	1275 aa		11.27	□□□□□ -0.61
HNRNPC-222	ENST00000555914	CCDC102A	Q96A19	550 aa		11.27	□□□□□ -0.61
HNRNPC-222	ENST00000555914	ZNF594	Q96JF6	807 aa	Predicted RBP	11.27	□□□□□ -0.61
HNRNPC-222	ENST00000555914	CSRNP1	Q96S65	589 aa		11.27	□□□□□ -0.61
HNRNPC-222	ENST00000555914	MCOLN1	Q9GZU1	580 aa		11.27	□□□□□ -0.61
HNRNPC-222	ENST00000555914	PITPNM2	Q9BZ72	1349 aa		11.27	□□□□□ -0.61
HNRNPC-222	ENST00000555914		A0A1B0GUL6	1792 aa		11.26	□□□□□ -0.61
HNRNPC-222	ENST00000555914	TNRC18	O15417	2968 aa	Predicted RBP	11.26	□□□□□ -0.61
HNRNPC-222	ENST00000555914	ANKRD18B	A2A2Z9	1011 aa		11.26	□□□□□ -0.61
HNRNPC-222	ENST00000555914	CCDC85C	A6NKD9	419 aa		11.26	□□□□□ -0.61
HNRNPC-222	ENST00000555914	PLIN1	O60240	522 aa		11.26	□□□□□ -0.61
HNRNPC-222	ENST00000555914	TRPA1	O75762	1119 aa		11.26	□□□□□ -0.61
HNRNPC-222	ENST00000555914	MKI67	P46013	3256 aa	Known RBP	11.26	□□□□□ -0.61
HNRNPC-222	ENST00000555914	LMBR1L	Q6UX01	489 aa		11.26	□□□□□ -0.61
HNRNPC-222	ENST00000555914	RASAL3	Q86YV0	1011 aa		11.26	□□□□□ -0.61
HNRNPC-222	ENST00000555914	OGFOD1	Q8N543	542 aa		11.26	□□□□□ -0.61
HNRNPC-222	ENST00000555914	ANKRD2	Q9GZV1	360 aa		11.26	□□□□□ -0.61
HNRNPC-222	ENST00000555914	RNF186	Q9NXI6	227 aa		11.26	□□□□□ -0.61
HNRNPC-222	ENST00000555914	CHMP3	Q9Y3E7	222 aa		11.26	□□□□□ -0.61
HNRNPC-222	ENST00000555914	PCDHAC2	Q9Y5I4	1007 aa		11.26	□□□□□ -0.61
HNRNPC-222	ENST00000555914	KCNJ4	P48050	445 aa		11.25	□□□□□ -0.61
HNRNPC-222	ENST00000555914	IFIT5	Q13325	482 aa	Known RBP	11.25	□□□□□ -0.61
HNRNPC-222	ENST00000555914	CERS5	Q8N5B7	392 aa		11.25	□□□□□ -0.61
HNRNPC-222	ENST00000555914	CD209	Q9NNX6	404 aa		11.25	□□□□□ -0.61
HNRNPC-222	ENST00000555914	HTT	P42858	3142 aa		11.25	□□□□□ -0.61
HNRNPC-222	ENST00000555914	AKAP11	Q9UKA4	1901 aa		11.25	□□□□□ -0.61
HNRNPC-222	ENST00000555914	MYO3B	Q8WXR4	1341 aa		11.24	□□□□□ -0.61
HNRNPC-222	ENST00000555914		E9PSI1	815 aa		11.24	□□□□□ -0.61
HNRNPC-222	ENST00000555914	UBE2Q2L	H0YL09	131 aa		11.24	□□□□□ -0.61
HNRNPC-222	ENST00000555914	GRM8	O00222	908 aa		11.24	□□□□□ -0.61
HNRNPC-222	ENST00000555914	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.24	□□□□□ -0.61
HNRNPC-222	ENST00000555914	NBR1	Q14596	966 aa		11.24	□□□□□ -0.61
HNRNPC-222	ENST00000555914	SLC4A10	Q6U841	1118 aa		11.24	□□□□□ -0.61
HNRNPC-222	ENST00000555914	FZD1	Q9UP38	647 aa		11.24	□□□□□ -0.61
HNRNPC-222	ENST00000555914	JAG2	Q9Y219	1238 aa		11.24	□□□□□ -0.61
HNRNPC-222	ENST00000555914	PAPPA2	Q9BXP8	1791 aa		11.24	□□□□□ -0.61
HNRNPC-222	ENST00000555914	DGKZ	Q13574	1117 aa		11.24	□□□□□ -0.61
HNRNPC-222	ENST00000555914	KAZALD1	Q96I82	304 aa		11.24	□□□□□ -0.61
HNRNPC-222	ENST00000555914	ZBED3	Q96IU2	234 aa	Predicted RBP	11.24	□□□□□ -0.61
HNRNPC-222	ENST00000555914		F8W031	263 aa	Predicted RBP	11.23	□□□□□ -0.61
HNRNPC-222	ENST00000555914	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.23	□□□□□ -0.61
HNRNPC-222	ENST00000555914	FKBP1B	P68106	108 aa		11.23	□□□□□ -0.61
HNRNPC-222	ENST00000555914	PRKG1	Q13976	671 aa		11.23	□□□□□ -0.61
HNRNPC-222	ENST00000555914	LDHAL6A	Q6ZMR3	332 aa		11.23	□□□□□ -0.61
HNRNPC-222	ENST00000555914	SUCLG2	Q96I99	432 aa		11.23	□□□□□ -0.61
HNRNPC-222	ENST00000555914	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.23	□□□□□ -0.61
HNRNPC-222	ENST00000555914	AOX1	Q06278	1338 aa		11.22	□□□□□ -0.61
HNRNPC-222	ENST00000555914	MKRN3	Q13064	507 aa	Known RBP	11.22	□□□□□ -0.61
HNRNPC-222	ENST00000555914	TTLL12	Q14166	644 aa	Predicted RBP	11.22	□□□□□ -0.61
HNRNPC-222	ENST00000555914	CCDC57	Q2TAC2	916 aa		11.22	□□□□□ -0.61
HNRNPC-222	ENST00000555914	C20orf194	Q5TEA3	1177 aa		11.22	□□□□□ -0.61
HNRNPC-222	ENST00000555914	C15orf52	Q6ZUT6	534 aa	Known RBP	11.22	□□□□□ -0.61
HNRNPC-222	ENST00000555914	PUS3	Q9BZE2	481 aa	Known RBP	11.22	□□□□□ -0.61
HNRNPC-222	ENST00000555914	SAGE1	Q9NXZ1	904 aa		11.22	□□□□□ -0.61
HNRNPC-222	ENST00000555914	IL1R1	P14778	569 aa		11.21	□□□□□ -0.61
HNRNPC-222	ENST00000555914	SRCIN1	Q9C0H9	1055 aa		11.21	□□□□□ -0.61
HNRNPC-222	ENST00000555914	HDAC9	Q9UKV0	1011 aa		11.21	□□□□□ -0.61
HNRNPC-222	ENST00000555914	PTPN12	Q05209	780 aa	Known RBP	11.2	□□□□□ -0.62
HNRNPC-222	ENST00000555914	CNNM1	Q9NRU3	951 aa		11.2	□□□□□ -0.62
HNRNPC-222	ENST00000555914	CLRN2	A0PK11	232 aa		11.2	□□□□□ -0.62
HNRNPC-222	ENST00000555914	ALDH1L1	O75891	902 aa		11.2	□□□□□ -0.62
HNRNPC-222	ENST00000555914	GYG1	P46976	350 aa		11.2	□□□□□ -0.62
HNRNPC-222	ENST00000555914	TAF7L	Q5H9L4	462 aa		11.2	□□□□□ -0.62
HNRNPC-222	ENST00000555914	ZNF804A	Q7Z570	1209 aa		11.2	□□□□□ -0.62
HNRNPC-222	ENST00000555914	MRPL50	Q8N5N7	158 aa	Known RBP	11.2	□□□□□ -0.62
HNRNPC-222	ENST00000555914	PRMT6	Q96LA8	375 aa	Predicted RBP	11.2	□□□□□ -0.62
HNRNPC-222	ENST00000555914	DEFB129	Q9H1M3	183 aa		11.2	□□□□□ -0.62
HNRNPC-222	ENST00000555914	BICC1	Q9H694	974 aa	Known RBP	11.2	□□□□□ -0.62
HNRNPC-222	ENST00000555914	SSC5D	A1L4H1	1573 aa		11.19	□□□□□ -0.62
HNRNPC-222	ENST00000555914	TBC1D8	O95759	1140 aa		11.19	□□□□□ -0.62
HNRNPC-222	ENST00000555914	RGS19	P49795	217 aa		11.19	□□□□□ -0.62
HNRNPC-222	ENST00000555914	PDE3A	Q14432	1141 aa		11.19	□□□□□ -0.62
HNRNPC-222	ENST00000555914	DLGAP5	Q15398	846 aa		11.19	□□□□□ -0.62
HNRNPC-222	ENST00000555914	CFAP100	Q494V2	611 aa		11.19	□□□□□ -0.62
HNRNPC-222	ENST00000555914	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.19	□□□□□ -0.62
HNRNPC-222	ENST00000555914	MTMR14	Q8NCE2	650 aa		11.19	□□□□□ -0.62
HNRNPC-222	ENST00000555914	FAM84B	Q96KN1	310 aa	Predicted RBP	11.19	□□□□□ -0.62
HNRNPC-222	ENST00000555914	UTY	O14607	1347 aa		11.18	□□□□□ -0.62
HNRNPC-222	ENST00000555914	ECM29	Q5VYK3	1845 aa		11.18	□□□□□ -0.62
HNRNPC-222	ENST00000555914	SPDYE2B	A6NHP3	402 aa		11.18	□□□□□ -0.62
HNRNPC-222	ENST00000555914	SPDYE6	P0CI01	402 aa		11.18	□□□□□ -0.62
HNRNPC-222	ENST00000555914	NF2	P35240	595 aa		11.18	□□□□□ -0.62
HNRNPC-222	ENST00000555914	MMP14	P50281	582 aa		11.18	□□□□□ -0.62
HNRNPC-222	ENST00000555914	AAMP	Q13685	434 aa		11.18	□□□□□ -0.62
HNRNPC-222	ENST00000555914	LRRC24	Q50LG9	513 aa		11.18	□□□□□ -0.62
HNRNPC-222	ENST00000555914	KLHDC4	Q8TBB5	520 aa		11.18	□□□□□ -0.62
HNRNPC-222	ENST00000555914	SSH1	Q8WYL5	1049 aa		11.18	□□□□□ -0.62
HNRNPC-222	ENST00000555914	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.18	□□□□□ -0.62
HNRNPC-222	ENST00000555914	ANGEL1	Q9UNK9	670 aa	Known RBP	11.18	□□□□□ -0.62
HNRNPC-222	ENST00000555914	RIPOR2	Q9Y4F9	1068 aa		11.18	□□□□□ -0.62
HNRNPC-222	ENST00000555914	TM4SF4	P48230	202 aa		11.17	□□□□□ -0.62
HNRNPC-222	ENST00000555914	LDLRAD1	Q5T700	205 aa		11.17	□□□□□ -0.62
HNRNPC-222	ENST00000555914	ANKRD44	Q8N8A2	993 aa		11.17	□□□□□ -0.62
HNRNPC-222	ENST00000555914	TDRD7	Q8NHU6	1098 aa	Known RBP	11.17	□□□□□ -0.62
HNRNPC-222	ENST00000555914	R3HDML	Q9H3Y0	253 aa		11.17	□□□□□ -0.62
HNRNPC-222	ENST00000555914	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.17	□□□□□ -0.62
HNRNPC-222	ENST00000555914	RBM5	P52756	815 aa	Known RBP eCLIP	11.17	□□□□□ -0.62	5e-14	■■□□□ 12.8
HNRNPC-222	ENST00000555914	MLLT1	Q03111	559 aa	Predicted RBP	11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms