RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 GGA3Q9NZ52 723 aa17.05■□□□□ 0.32
SNX6-203ENST00000555416 HDAC5Q9UQL6 1122 aa17.05■□□□□ 0.32
SNX6-203ENST00000555416 PCDHAC2Q9Y5I4 1007 aa17.05■□□□□ 0.32
SNX6-203ENST00000555416 SASH1O94885 1247 aa17.04■□□□□ 0.32
SNX6-203ENST00000555416 CDC37L1Q7L3B6 337 aa17.04■□□□□ 0.32
SNX6-203ENST00000555416 TRPM7Q96QT4 1865 aa17.03■□□□□ 0.32
SNX6-203ENST00000555416 AOX1Q06278 1338 aa17.03■□□□□ 0.32
SNX6-203ENST00000555416 FAM205AQ6ZU69 1335 aa17.03■□□□□ 0.32
SNX6-203ENST00000555416 MYO3BQ8WXR4 1341 aa17.03■□□□□ 0.32
SNX6-203ENST00000555416 GRIK5Q16478 980 aa17.03■□□□□ 0.32
SNX6-203ENST00000555416 ANGEL2Q5VTE6 544 aaKnown RBP17.03■□□□□ 0.32
SNX6-203ENST00000555416 KRT26Q7Z3Y9 468 aa17.03■□□□□ 0.32
SNX6-203ENST00000555416 ZBED3Q96IU2 234 aaPredicted RBP17.03■□□□□ 0.32
SNX6-203ENST00000555416 FBXO3Q9UK99 471 aa17.03■□□□□ 0.32
SNX6-203ENST00000555416 PCNTO95613 3336 aa17.02■□□□□ 0.32
SNX6-203ENST00000555416 F8W031 263 aaPredicted RBP17.02■□□□□ 0.32
SNX6-203ENST00000555416 WNT10BO00744 389 aa17.02■□□□□ 0.32
SNX6-203ENST00000555416 CELF2O95319 508 aaKnown RBP17.02■□□□□ 0.32
SNX6-203ENST00000555416 IL15P40933 162 aaPredicted RBP17.02■□□□□ 0.32
SNX6-203ENST00000555416 PPP4R3CPQ6ZMV5 832 aa17.02■□□□□ 0.32
SNX6-203ENST00000555416 LPIN2Q92539 896 aa17.02■□□□□ 0.32
SNX6-203ENST00000555416 CEP126Q9P2H0 1117 aa17.02■□□□□ 0.32
SNX6-203ENST00000555416 CNTNAP1P78357 1384 aa17.02■□□□□ 0.31
SNX6-203ENST00000555416 COL1A1P02452 1464 aaPredicted RBP17.01■□□□□ 0.31
SNX6-203ENST00000555416 IFIT1P09914 478 aaKnown RBP17.01■□□□□ 0.31
SNX6-203ENST00000555416 ADORA1P30542 326 aa17.01■□□□□ 0.31
SNX6-203ENST00000555416 TFCP2Q12800 502 aa17.01■□□□□ 0.31
SNX6-203ENST00000555416 POLA2Q14181 598 aa17.01■□□□□ 0.31
SNX6-203ENST00000555416 ATP2B3Q16720 1220 aa17.01■□□□□ 0.31
SNX6-203ENST00000555416 C20orf194Q5TEA3 1177 aa17.01■□□□□ 0.31
SNX6-203ENST00000555416 OGFOD1Q8N543 542 aa17.01■□□□□ 0.31
SNX6-203ENST00000555416 JMYQ8N9B5 988 aa17.01■□□□□ 0.31
SNX6-203ENST00000555416 DCPSQ96C86 337 aaKnown RBP17.01■□□□□ 0.31
SNX6-203ENST00000555416 YTHDC1Q96MU7 727 aaKnown RBP17.01■□□□□ 0.31
SNX6-203ENST00000555416 ZNF408Q9H9D4 720 aa17.01■□□□□ 0.31
SNX6-203ENST00000555416 SLC5A1P13866 664 aa17■□□□□ 0.31
SNX6-203ENST00000555416 FKBP1AP62942 108 aaKnown RBP17■□□□□ 0.31
SNX6-203ENST00000555416 CHAF1AQ13111 956 aaPredicted RBP17■□□□□ 0.31
SNX6-203ENST00000555416 CAVIN4Q5BKX8 364 aa17■□□□□ 0.31
SNX6-203ENST00000555416 MFSD14BQ5SR56 506 aa17■□□□□ 0.31
SNX6-203ENST00000555416 VPS37DQ86XT2 251 aa17■□□□□ 0.31
SNX6-203ENST00000555416 ABT1Q9ULW3 272 aaKnown RBP17■□□□□ 0.31
SNX6-203ENST00000555416 RASSF10A6NK89 507 aa16.99■□□□□ 0.31
SNX6-203ENST00000555416 VEGFBP49765 207 aa16.99■□□□□ 0.31
SNX6-203ENST00000555416 ATP8B2P98198 1209 aa16.99■□□□□ 0.31
SNX6-203ENST00000555416 PRAMEF18Q5VWM3 479 aa16.99■□□□□ 0.31
SNX6-203ENST00000555416 SSH3Q8TE77 659 aa16.99■□□□□ 0.31
SNX6-203ENST00000555416 COG6Q9Y2V7 657 aa16.99■□□□□ 0.31
SNX6-203ENST00000555416 PHKA1P46020 1223 aa16.98■□□□□ 0.31
SNX6-203ENST00000555416 TIMM10P62072 90 aa16.98■□□□□ 0.31
SNX6-203ENST00000555416 SULF1Q8IWU6 871 aa16.98■□□□□ 0.31
SNX6-203ENST00000555416 HDAC9Q9UKV0 1011 aa16.98■□□□□ 0.31
SNX6-203ENST00000555416 TLL2Q9Y6L7 1015 aa16.98■□□□□ 0.31
SNX6-203ENST00000555416 ARAP2Q8WZ64 1704 aa16.97■□□□□ 0.31
SNX6-203ENST00000555416 MVPQ14764 893 aaKnown RBP16.97■□□□□ 0.31
SNX6-203ENST00000555416 CFAP100Q494V2 611 aa16.97■□□□□ 0.31
SNX6-203ENST00000555416 CEP85Q6P2H3 762 aa16.97■□□□□ 0.31
SNX6-203ENST00000555416 SAPCD2Q86UD0 394 aa16.97■□□□□ 0.31
SNX6-203ENST00000555416 CDCA5Q96FF9 252 aa16.97■□□□□ 0.31
SNX6-203ENST00000555416 PRMT6Q96LA8 375 aaPredicted RBP16.97■□□□□ 0.31
SNX6-203ENST00000555416 PITPNM2Q9BZ72 1349 aa16.96■□□□□ 0.31
SNX6-203ENST00000555416 FRAT2O75474 233 aaPredicted RBP16.96■□□□□ 0.31
SNX6-203ENST00000555416 DLGAP5Q15398 846 aa16.96■□□□□ 0.31
SNX6-203ENST00000555416 DEFB115Q30KQ5 88 aa16.96■□□□□ 0.31
SNX6-203ENST00000555416 MTMR14Q8NCE2 650 aa16.96■□□□□ 0.31
SNX6-203ENST00000555416 TTF2Q9UNY4 1162 aaKnown RBP16.96■□□□□ 0.31
SNX6-203ENST00000555416 A0A1B0GUL7 405 aa16.95■□□□□ 0.3
SNX6-203ENST00000555416 SPDYE2BA6NHP3 402 aa16.95■□□□□ 0.3
SNX6-203ENST00000555416 SPDYE6P0CI01 402 aa16.95■□□□□ 0.3
SNX6-203ENST00000555416 MMP14P50281 582 aa16.95■□□□□ 0.3
SNX6-203ENST00000555416 CYP4F22Q6NT55 531 aa16.95■□□□□ 0.3
SNX6-203ENST00000555416 CLRN2A0PK11 232 aa16.94■□□□□ 0.3
SNX6-203ENST00000555416 G3BP1Q13283 466 aaKnown RBP eCLIP16.94■□□□□ 0.3
SNX6-203ENST00000555416 CCDC102BQ68D86 513 aa16.94■□□□□ 0.3
SNX6-203ENST00000555416 XAGE2Q96GT9 111 aa16.94■□□□□ 0.3
SNX6-203ENST00000555416 ZBTB40Q9NUA8 1239 aa16.94■□□□□ 0.3
SNX6-203ENST00000555416 MS4A1P11836 297 aa16.93■□□□□ 0.3
SNX6-203ENST00000555416 CRKP46108 304 aa16.93■□□□□ 0.3
SNX6-203ENST00000555416 MOB2Q70IA6 237 aa16.93■□□□□ 0.3
SNX6-203ENST00000555416 SIRT2Q8IXJ6 389 aa16.93■□□□□ 0.3
SNX6-203ENST00000555416 GBA2Q9HCG7 927 aaPredicted RBP16.93■□□□□ 0.3
SNX6-203ENST00000555416 NOP58Q9Y2X3 529 aaKnown RBP16.93■□□□□ 0.3
SNX6-203ENST00000555416 MYH13Q9UKX3 1938 aa16.92■□□□□ 0.3
SNX6-203ENST00000555416 SURF6O75683 361 aaKnown RBP16.92■□□□□ 0.3
SNX6-203ENST00000555416 RBM5P52756 815 aaKnown RBP eCLIP16.92■□□□□ 0.3
SNX6-203ENST00000555416 GRM1Q13255 1194 aa16.92■□□□□ 0.3
SNX6-203ENST00000555416 RASGRF1Q13972 1273 aa16.92■□□□□ 0.3
SNX6-203ENST00000555416 TBC1D22AQ8WUA7 517 aa16.92■□□□□ 0.3
SNX6-203ENST00000555416 CAPNS2Q96L46 248 aa16.92■□□□□ 0.3
SNX6-203ENST00000555416 SERPINA10Q9UK55 444 aa16.92■□□□□ 0.3
SNX6-203ENST00000555416 DDX19BQ9UMR2 479 aa16.92■□□□□ 0.3
SNX6-203ENST00000555416 WDR33Q9C0J8 1336 aaKnown RBP16.92■□□□□ 0.3
SNX6-203ENST00000555416 AOC2O75106 756 aa16.91■□□□□ 0.3
SNX6-203ENST00000555416 PRDX5P30044 214 aa16.91■□□□□ 0.3
SNX6-203ENST00000555416 HUNKP57058 714 aa16.91■□□□□ 0.3
SNX6-203ENST00000555416 PAXIP1Q6ZW49 1069 aaPredicted RBP16.91■□□□□ 0.3
SNX6-203ENST00000555416 NEUROD6Q96NK8 337 aa16.91■□□□□ 0.3
SNX6-203ENST00000555416 TDRD3Q9H7E2 651 aaKnown RBP16.91■□□□□ 0.3
SNX6-203ENST00000555416 AKAP2Q9Y2D5 859 aa16.91■□□□□ 0.3
SNX6-203ENST00000555416 ECM29Q5VYK3 1845 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms