RNA–Protein interactions for RNA: ENST00000555382.5

PRKCH-215, Transcript of protein kinase C eta, human

TSL 3

Gene PRKCH, Length 691 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-215	ENST00000555382	FBXO46	Q6PJ61	603 aa	Predicted RBP	12	□□□□□ -0.49
PRKCH-215	ENST00000555382	RPAP2	Q8IXW5	612 aa	Predicted RBP	12	□□□□□ -0.49
PRKCH-215	ENST00000555382	GCC1	Q96CN9	775 aa		12	□□□□□ -0.49
PRKCH-215	ENST00000555382	R3HDML	Q9H3Y0	253 aa		12	□□□□□ -0.49
PRKCH-215	ENST00000555382	PODXL2	Q9NZ53	605 aa		12	□□□□□ -0.49
PRKCH-215	ENST00000555382		A0A0C4DFX4	3053 aa		12	□□□□□ -0.49
PRKCH-215	ENST00000555382	GPR25	O00155	361 aa		11.99	□□□□□ -0.49
PRKCH-215	ENST00000555382	RIMBP2	O15034	1052 aa		11.99	□□□□□ -0.49
PRKCH-215	ENST00000555382	TTLL11	Q8NHH1	800 aa		11.99	□□□□□ -0.49
PRKCH-215	ENST00000555382	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.99	□□□□□ -0.49
PRKCH-215	ENST00000555382	COL6A3	P12111	3177 aa		11.99	□□□□□ -0.49
PRKCH-215	ENST00000555382	LAMA3	Q16787	3333 aa		11.99	□□□□□ -0.49
PRKCH-215	ENST00000555382	TRIOBP	Q9H2D6	2365 aa		11.98	□□□□□ -0.49
PRKCH-215	ENST00000555382	FXR1	P51114	621 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
PRKCH-215	ENST00000555382	CTSW	P56202	376 aa		11.98	□□□□□ -0.49
PRKCH-215	ENST00000555382	SCARF1	Q14162	830 aa		11.98	□□□□□ -0.49
PRKCH-215	ENST00000555382	CCDC152	Q4G0S7	254 aa		11.98	□□□□□ -0.49
PRKCH-215	ENST00000555382	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.98	□□□□□ -0.49
PRKCH-215	ENST00000555382	AGBL3	Q8NEM8	1001 aa		11.98	□□□□□ -0.49
PRKCH-215	ENST00000555382	SUCLG2	Q96I99	432 aa		11.98	□□□□□ -0.49
PRKCH-215	ENST00000555382	CRBN	Q96SW2	442 aa		11.98	□□□□□ -0.49
PRKCH-215	ENST00000555382	FBXO3	Q9UK99	471 aa		11.98	□□□□□ -0.49
PRKCH-215	ENST00000555382	POTEF	A5A3E0	1075 aa		11.97	□□□□□ -0.49
PRKCH-215	ENST00000555382	NEFL	P07196	543 aa		11.97	□□□□□ -0.49
PRKCH-215	ENST00000555382	ATP8B2	P98198	1209 aa		11.97	□□□□□ -0.49
PRKCH-215	ENST00000555382	ANKRD44	Q8N8A2	993 aa		11.97	□□□□□ -0.49
PRKCH-215	ENST00000555382	LRRFIP2	Q9Y608	721 aa	Known RBP	11.97	□□□□□ -0.49
PRKCH-215	ENST00000555382	UBE2Q2L	H0YL09	131 aa		11.96	□□□□□ -0.49
PRKCH-215	ENST00000555382	C6orf229	H3BNL8	230 aa		11.96	□□□□□ -0.49
PRKCH-215	ENST00000555382	POLA2	Q14181	598 aa		11.96	□□□□□ -0.49
PRKCH-215	ENST00000555382	EPHA10	Q5JZY3	1008 aa		11.96	□□□□□ -0.49
PRKCH-215	ENST00000555382	SSH3	Q8TE77	659 aa		11.96	□□□□□ -0.49
PRKCH-215	ENST00000555382	EYA3	Q99504	573 aa		11.96	□□□□□ -0.49
PRKCH-215	ENST00000555382	BICC1	Q9H694	974 aa	Known RBP	11.96	□□□□□ -0.49
PRKCH-215	ENST00000555382	MYOZ2	Q9NPC6	264 aa		11.96	□□□□□ -0.49
PRKCH-215	ENST00000555382	HDAC9	Q9UKV0	1011 aa		11.96	□□□□□ -0.49
PRKCH-215	ENST00000555382	SCAF8	Q9UPN6	1271 aa	Known RBP	11.96	□□□□□ -0.49
PRKCH-215	ENST00000555382	HMMR	O75330	724 aa		11.95	□□□□□ -0.5
PRKCH-215	ENST00000555382	RPS8	P62241	208 aa	Known RBP	11.95	□□□□□ -0.5
PRKCH-215	ENST00000555382	CEP85	Q6P2H3	762 aa		11.95	□□□□□ -0.5
PRKCH-215	ENST00000555382	LMBR1L	Q6UX01	489 aa		11.95	□□□□□ -0.5
PRKCH-215	ENST00000555382	COPRS	Q9NQ92	184 aa		11.95	□□□□□ -0.5
PRKCH-215	ENST00000555382	SSC5D	A1L4H1	1573 aa		11.95	□□□□□ -0.5
PRKCH-215	ENST00000555382	CAP1	Q01518	475 aa		11.94	□□□□□ -0.5
PRKCH-215	ENST00000555382	IFIT5	Q13325	482 aa	Known RBP	11.94	□□□□□ -0.5
PRKCH-215	ENST00000555382	HDAC1	Q13547	482 aa	Predicted RBP	11.94	□□□□□ -0.5
PRKCH-215	ENST00000555382	NBPF9	Q3BBW0	867 aa		11.94	□□□□□ -0.5
PRKCH-215	ENST00000555382	LDLRAD1	Q5T700	205 aa		11.94	□□□□□ -0.5
PRKCH-215	ENST00000555382	PRAMEF18	Q5VWM3	479 aa		11.94	□□□□□ -0.5
PRKCH-215	ENST00000555382	EXOC6	Q8TAG9	804 aa		11.94	□□□□□ -0.5
PRKCH-215	ENST00000555382	CDC5L	Q99459	802 aa	Known RBP	11.94	□□□□□ -0.5
PRKCH-215	ENST00000555382	SEC31B	Q9NQW1	1179 aa		11.94	□□□□□ -0.5
PRKCH-215	ENST00000555382	ANKRD18B	A2A2Z9	1011 aa		11.93	□□□□□ -0.5
PRKCH-215	ENST00000555382	FKTN	O75072	461 aa		11.93	□□□□□ -0.5
PRKCH-215	ENST00000555382	UFL1	O94874	794 aa		11.93	□□□□□ -0.5
PRKCH-215	ENST00000555382	USP17L8	P0C7I0	530 aa		11.93	□□□□□ -0.5
PRKCH-215	ENST00000555382	RFX5	P48382	616 aa	Predicted RBP	11.93	□□□□□ -0.5
PRKCH-215	ENST00000555382	CCDC57	Q2TAC2	916 aa		11.93	□□□□□ -0.5
PRKCH-215	ENST00000555382	RTL5	Q5HYW3	569 aa	Predicted RBP	11.93	□□□□□ -0.5
PRKCH-215	ENST00000555382	OTOP1	Q7RTM1	612 aa		11.93	□□□□□ -0.5
PRKCH-215	ENST00000555382	JARID2	Q92833	1246 aa	Predicted RBP	11.93	□□□□□ -0.5
PRKCH-215	ENST00000555382	GREM2	Q9H772	168 aa		11.93	□□□□□ -0.5
PRKCH-215	ENST00000555382	NOP58	Q9Y2X3	529 aa	Known RBP	11.93	□□□□□ -0.5
PRKCH-215	ENST00000555382	CUL9	Q8IWT3	2517 aa		11.92	□□□□□ -0.5
PRKCH-215	ENST00000555382	WTIP	A6NIX2	430 aa	Predicted RBP	11.92	□□□□□ -0.5
PRKCH-215	ENST00000555382	SRGAP3	O43295	1099 aa		11.92	□□□□□ -0.5
PRKCH-215	ENST00000555382	CIAO1	O76071	339 aa		11.92	□□□□□ -0.5
PRKCH-215	ENST00000555382	ITGA6	P23229	1130 aa		11.92	□□□□□ -0.5
PRKCH-215	ENST00000555382	PTPN12	Q05209	780 aa	Known RBP	11.92	□□□□□ -0.5
PRKCH-215	ENST00000555382	SIRT2	Q8IXJ6	389 aa		11.92	□□□□□ -0.5
PRKCH-215	ENST00000555382	ARMC5	Q96C12	935 aa		11.92	□□□□□ -0.5
PRKCH-215	ENST00000555382	ZBED3	Q96IU2	234 aa	Predicted RBP	11.92	□□□□□ -0.5
PRKCH-215	ENST00000555382	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.92	□□□□□ -0.5
PRKCH-215	ENST00000555382	BSDC1	Q9NW68	430 aa	Predicted RBP	11.92	□□□□□ -0.5
PRKCH-215	ENST00000555382	PCDHB15	Q9Y5E8	787 aa		11.92	□□□□□ -0.5
PRKCH-215	ENST00000555382	PNMA6E	A0A0J9YXQ4	647 aa		11.91	□□□□□ -0.5
PRKCH-215	ENST00000555382	WNT10B	O00744	389 aa		11.91	□□□□□ -0.5
PRKCH-215	ENST00000555382	SREBF2	Q12772	1141 aa		11.91	□□□□□ -0.5
PRKCH-215	ENST00000555382	HSP90AB4P	Q58FF6	505 aa		11.91	□□□□□ -0.5
PRKCH-215	ENST00000555382	DACT2	Q5SW24	774 aa		11.91	□□□□□ -0.5
PRKCH-215	ENST00000555382	SPRYD7	Q5W111	196 aa		11.91	□□□□□ -0.5
PRKCH-215	ENST00000555382	ANKRD18A	Q8IVF6	992 aa		11.91	□□□□□ -0.5
PRKCH-215	ENST00000555382	GGA1	Q9UJY5	639 aa		11.91	□□□□□ -0.5
PRKCH-215	ENST00000555382	COL1A1	P02452	1464 aa	Predicted RBP	11.9	□□□□□ -0.5
PRKCH-215	ENST00000555382		A0A1B0GUL6	1792 aa		11.9	□□□□□ -0.5
PRKCH-215	ENST00000555382	USP17L3	A6NCW0	530 aa		11.9	□□□□□ -0.5
PRKCH-215	ENST00000555382	USP17L4	A6NCW7	530 aa		11.9	□□□□□ -0.5
PRKCH-215	ENST00000555382	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
PRKCH-215	ENST00000555382	USP17L1	Q7RTZ2	530 aa		11.9	□□□□□ -0.5
PRKCH-215	ENST00000555382	MXD3	Q9BW11	206 aa		11.9	□□□□□ -0.5
PRKCH-215	ENST00000555382	RWDD1	Q9H446	243 aa	Predicted RBP	11.9	□□□□□ -0.5
PRKCH-215	ENST00000555382	DCTPP1	Q9H773	170 aa		11.9	□□□□□ -0.5
PRKCH-215	ENST00000555382	OTOF	Q9HC10	1997 aa		11.9	□□□□□ -0.5
PRKCH-215	ENST00000555382	ECM29	Q5VYK3	1845 aa		11.9	□□□□□ -0.5
PRKCH-215	ENST00000555382	SPEF2	Q9C093	1822 aa		11.9	□□□□□ -0.5
PRKCH-215	ENST00000555382	MED23	Q9ULK4	1368 aa		11.9	□□□□□ -0.5
PRKCH-215	ENST00000555382	XDH	P47989	1333 aa		11.89	□□□□□ -0.51
PRKCH-215	ENST00000555382	IGHMBP2	P38935	993 aa	Known RBP	11.89	□□□□□ -0.51
PRKCH-215	ENST00000555382	MKRN3	Q13064	507 aa	Known RBP	11.89	□□□□□ -0.51
PRKCH-215	ENST00000555382	MAP3K11	Q16584	847 aa		11.89	□□□□□ -0.51

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