RNA–Protein interactions for RNA: ENST00000555094.5

GABRB3-208, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,494 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-208ENST00000555094 PDE6AP16499 860 aa13.06□□□□□ -0.32
GABRB3-208ENST00000555094 ATP2B4P23634 1241 aa13.06□□□□□ -0.32
GABRB3-208ENST00000555094 ADD2P35612 726 aa13.06□□□□□ -0.32
GABRB3-208ENST00000555094 RABEP1Q15276 862 aa13.06□□□□□ -0.32
GABRB3-208ENST00000555094 STYK1Q6J9G0 422 aa13.06□□□□□ -0.32
GABRB3-208ENST00000555094 TXNRD3Q86VQ6 643 aa13.06□□□□□ -0.32
GABRB3-208ENST00000555094 TBC1D2Q9BYX2 928 aa13.06□□□□□ -0.32
GABRB3-208ENST00000555094 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.06□□□□□ -0.32
GABRB3-208ENST00000555094 IQSEC3Q9UPP2 1182 aaPredicted RBP13.06□□□□□ -0.32
GABRB3-208ENST00000555094 ATP6V0A2Q9Y487 856 aa13.06□□□□□ -0.32
GABRB3-208ENST00000555094 RBM8AQ9Y5S9 174 aaKnown RBP13.06□□□□□ -0.32
GABRB3-208ENST00000555094 CCDC88AQ3V6T2 1871 aa13.06□□□□□ -0.32
GABRB3-208ENST00000555094 TCRBV5S4A2TA0A5A2 114 aa13.05□□□□□ -0.32
GABRB3-208ENST00000555094 SEMA3EO15041 775 aa13.05□□□□□ -0.32
GABRB3-208ENST00000555094 UFL1O94874 794 aa13.05□□□□□ -0.32
GABRB3-208ENST00000555094 HIBADHP31937 336 aaKnown RBP13.05□□□□□ -0.32
GABRB3-208ENST00000555094 SP8Q8IXZ3 490 aa13.05□□□□□ -0.32
GABRB3-208ENST00000555094 APPBP2Q92624 585 aa13.05□□□□□ -0.32
GABRB3-208ENST00000555094 MAP4K1Q92918 833 aa13.05□□□□□ -0.32
GABRB3-208ENST00000555094 KCNB2Q92953 911 aa13.05□□□□□ -0.32
GABRB3-208ENST00000555094 OSBP2Q969R2 916 aa13.05□□□□□ -0.32
GABRB3-208ENST00000555094 SNX21Q969T3 373 aa13.05□□□□□ -0.32
GABRB3-208ENST00000555094 GPR101Q96P66 508 aaPredicted RBP13.05□□□□□ -0.32
GABRB3-208ENST00000555094 GGA1Q9UJY5 639 aa13.05□□□□□ -0.32
GABRB3-208ENST00000555094 WWC3Q9ULE0 1092 aa13.05□□□□□ -0.32
GABRB3-208ENST00000555094 DENND2AQ9ULE3 1009 aa13.05□□□□□ -0.32
GABRB3-208ENST00000555094 DCAF8L1A6NGE4 600 aa13.04□□□□□ -0.32
GABRB3-208ENST00000555094 IDH1O75874 414 aaKnown RBP13.04□□□□□ -0.32
GABRB3-208ENST00000555094 BECN1Q14457 450 aa13.04□□□□□ -0.32
GABRB3-208ENST00000555094 ZSCAN25Q6NSZ9 544 aa13.04□□□□□ -0.32
GABRB3-208ENST00000555094 VPS37DQ86XT2 251 aa13.04□□□□□ -0.32
GABRB3-208ENST00000555094 SNX14Q9Y5W7 946 aa13.04□□□□□ -0.32
GABRB3-208ENST00000555094 SNED1Q8TER0 1413 aa13.04□□□□□ -0.32
GABRB3-208ENST00000555094 H0YIN7 160 aa13.04□□□□□ -0.32
GABRB3-208ENST00000555094 CD2BP2O95400 341 aaKnown RBP13.04□□□□□ -0.32
GABRB3-208ENST00000555094 CHRNA5P30532 468 aa13.04□□□□□ -0.32
GABRB3-208ENST00000555094 ALDH1B1P30837 517 aa13.04□□□□□ -0.32
GABRB3-208ENST00000555094 SLC4A3P48751 1232 aa13.04□□□□□ -0.32
GABRB3-208ENST00000555094 NECTIN1Q15223 517 aa13.04□□□□□ -0.32
GABRB3-208ENST00000555094 UBE3CQ15386 1083 aa13.04□□□□□ -0.32
GABRB3-208ENST00000555094 SLC9C2Q5TAH2 1124 aa13.04□□□□□ -0.32
GABRB3-208ENST00000555094 PRPF40BQ6NWY9 871 aaKnown RBP13.04□□□□□ -0.32
GABRB3-208ENST00000555094 SAMD1Q6SPF0 538 aaPredicted RBP13.04□□□□□ -0.32
GABRB3-208ENST00000555094 RASEFQ8IZ41 740 aa13.04□□□□□ -0.32
GABRB3-208ENST00000555094 TBC1D16Q8TBP0 767 aa13.04□□□□□ -0.32
GABRB3-208ENST00000555094 POLLQ9UGP5 575 aa13.04□□□□□ -0.32
GABRB3-208ENST00000555094 NSFL1CQ9UNZ2 370 aaKnown RBP13.04□□□□□ -0.32
GABRB3-208ENST00000555094 ZNF532Q9HCE3 1301 aa13.03□□□□□ -0.32
GABRB3-208ENST00000555094 BRCA1P38398 1863 aaKnown RBP13.03□□□□□ -0.32
GABRB3-208ENST00000555094 SRCAPQ6ZRS2 3230 aa13.03□□□□□ -0.32
GABRB3-208ENST00000555094 MAP3K12Q12852 859 aa13.03□□□□□ -0.32
GABRB3-208ENST00000555094 WASHC4Q2M389 1173 aa13.03□□□□□ -0.32
GABRB3-208ENST00000555094 CREB3L3Q68CJ9 461 aa13.03□□□□□ -0.32
GABRB3-208ENST00000555094 OLFM4Q6UX06 510 aa13.03□□□□□ -0.32
GABRB3-208ENST00000555094 ZNF804AQ7Z570 1209 aa13.03□□□□□ -0.32
GABRB3-208ENST00000555094 ZNF622Q969S3 477 aaKnown RBP eCLIP13.03□□□□□ -0.32
GABRB3-208ENST00000555094 ZNF646O15015 1829 aaPredicted RBP13.03□□□□□ -0.32
GABRB3-208ENST00000555094 CHD4Q14839 1912 aa13.03□□□□□ -0.32
GABRB3-208ENST00000555094 SLC27A2O14975 620 aa13.02□□□□□ -0.33
GABRB3-208ENST00000555094 FOXP2O15409 715 aa13.02□□□□□ -0.33
GABRB3-208ENST00000555094 VPS53Q5VIR6 699 aa13.02□□□□□ -0.33
GABRB3-208ENST00000555094 HSCBQ8IWL3 235 aa13.02□□□□□ -0.33
GABRB3-208ENST00000555094 TDRD7Q8NHU6 1098 aaKnown RBP13.02□□□□□ -0.33
GABRB3-208ENST00000555094 DSCC1Q9BVC3 393 aa13.02□□□□□ -0.33
GABRB3-208ENST00000555094 PUS7LQ9H0K6 701 aaKnown RBP13.02□□□□□ -0.33
GABRB3-208ENST00000555094 U3KPZ7 1027 aaPredicted RBP13.02□□□□□ -0.33
GABRB3-208ENST00000555094 RPAP1Q9BWH6 1393 aaPredicted RBP13.02□□□□□ -0.33
GABRB3-208ENST00000555094 GPAA1O43292 621 aa13.01□□□□□ -0.33
GABRB3-208ENST00000555094 ZBTB7AO95365 584 aa13.01□□□□□ -0.33
GABRB3-208ENST00000555094 HSPD1P10809 573 aaKnown RBP13.01□□□□□ -0.33
GABRB3-208ENST00000555094 MAGEB6Q8N7X4 407 aa13.01□□□□□ -0.33
GABRB3-208ENST00000555094 CNKSR1Q969H4 720 aa13.01□□□□□ -0.33
GABRB3-208ENST00000555094 MTFR1LQ9H019 292 aa13.01□□□□□ -0.33
GABRB3-208ENST00000555094 SALL1Q9NSC2 1324 aa13□□□□□ -0.33
GABRB3-208ENST00000555094 CHAF1AQ13111 956 aaPredicted RBP13□□□□□ -0.33
GABRB3-208ENST00000555094 R3HDM1Q15032 1099 aaKnown RBP13□□□□□ -0.33
GABRB3-208ENST00000555094 LRP2BPQ9P2M1 347 aa13□□□□□ -0.33
GABRB3-208ENST00000555094 DAXXQ9UER7 740 aaPredicted RBP13□□□□□ -0.33
GABRB3-208ENST00000555094 TAF6LQ9Y6J9 622 aa13□□□□□ -0.33
GABRB3-208ENST00000555094 TIAM2Q8IVF5 1701 aa13□□□□□ -0.33
GABRB3-208ENST00000555094 C6orf229H3BNL8 230 aa12.99□□□□□ -0.33
GABRB3-208ENST00000555094 FRAT2O75474 233 aaPredicted RBP12.99□□□□□ -0.33
GABRB3-208ENST00000555094 IL1R1P14778 569 aa12.99□□□□□ -0.33
GABRB3-208ENST00000555094 DPP8Q6V1X1 898 aaPredicted RBP12.99□□□□□ -0.33
GABRB3-208ENST00000555094 MPNDQ8N594 471 aa12.99□□□□□ -0.33
GABRB3-208ENST00000555094 ZNF384Q8TF68 577 aa12.99□□□□□ -0.33
GABRB3-208ENST00000555094 UPF3BQ9BZI7 483 aaKnown RBP12.99□□□□□ -0.33
GABRB3-208ENST00000555094 CD209Q9NNX6 404 aa12.99□□□□□ -0.33
GABRB3-208ENST00000555094 ABCF2Q9UG63 623 aa12.99□□□□□ -0.33
GABRB3-208ENST00000555094 ST18O60284 1047 aa12.98□□□□□ -0.33
GABRB3-208ENST00000555094 MBD4O95243 580 aa12.98□□□□□ -0.33
GABRB3-208ENST00000555094 ADCK5Q3MIX3 580 aa12.98□□□□□ -0.33
GABRB3-208ENST00000555094 RNF20Q5VTR2 975 aa12.98□□□□□ -0.33
GABRB3-208ENST00000555094 ADGRA1Q86SQ6 560 aa12.98□□□□□ -0.33
GABRB3-208ENST00000555094 C7orf43Q8WVR3 580 aa12.98□□□□□ -0.33
GABRB3-208ENST00000555094 TM6SF1Q9BZW5 370 aa12.98□□□□□ -0.33
GABRB3-208ENST00000555094 RAI14Q9P0K7 980 aa12.98□□□□□ -0.33
GABRB3-208ENST00000555094 LAMB1P07942 1786 aa12.98□□□□□ -0.33
GABRB3-208ENST00000555094 K7ELQ4 463 aaPredicted RBP12.97□□□□□ -0.33
GABRB3-208ENST00000555094 CYP21A2P08686 494 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms