RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 PTPN18Q99952 460 aa16.97■□□□□ 0.31
TUBB3-207ENST00000554927 PCDHAC2Q9Y5I4 1007 aa16.97■□□□□ 0.31
TUBB3-207ENST00000554927 MKI67P46013 3256 aaKnown RBP16.96■□□□□ 0.31
TUBB3-207ENST00000554927 RBM5P52756 815 aaKnown RBP eCLIP16.96■□□□□ 0.31
TUBB3-207ENST00000554927 CFAP100Q494V2 611 aa16.96■□□□□ 0.31
TUBB3-207ENST00000554927 CCDC30Q5VVM6 783 aa16.96■□□□□ 0.31
TUBB3-207ENST00000554927 ANKRD13AQ8IZ07 590 aa16.96■□□□□ 0.31
TUBB3-207ENST00000554927 ELP3Q9H9T3 547 aa16.96■□□□□ 0.31
TUBB3-207ENST00000554927 CD209Q9NNX6 404 aa16.96■□□□□ 0.31
TUBB3-207ENST00000554927 PTCH2Q9Y6C5 1203 aa16.96■□□□□ 0.31
TUBB3-207ENST00000554927 SPEF2Q9C093 1822 aa16.96■□□□□ 0.3
TUBB3-207ENST00000554927 RBBP6Q7Z6E9 1792 aaKnown RBP16.95■□□□□ 0.3
TUBB3-207ENST00000554927 PI4KAP2A4QPH2 592 aa16.95■□□□□ 0.3
TUBB3-207ENST00000554927 H0YGN5 161 aa16.95■□□□□ 0.3
TUBB3-207ENST00000554927 USP2O75604 605 aaPredicted RBP16.95■□□□□ 0.3
TUBB3-207ENST00000554927 IGKV5-2P06315 115 aa16.95■□□□□ 0.3
TUBB3-207ENST00000554927 ITGA6P23229 1130 aa16.95■□□□□ 0.3
TUBB3-207ENST00000554927 UBE3BQ7Z3V4 1068 aa16.95■□□□□ 0.3
TUBB3-207ENST00000554927 PI4KAP1Q8N8J0 262 aa16.95■□□□□ 0.3
TUBB3-207ENST00000554927 MTMR14Q8NCE2 650 aa16.95■□□□□ 0.3
TUBB3-207ENST00000554927 OPTNQ96CV9 577 aa16.95■□□□□ 0.3
TUBB3-207ENST00000554927 ZNF646O15015 1829 aaPredicted RBP16.94■□□□□ 0.3
TUBB3-207ENST00000554927 SPDYE2BA6NHP3 402 aa16.94■□□□□ 0.3
TUBB3-207ENST00000554927 APAF1O14727 1248 aa16.94■□□□□ 0.3
TUBB3-207ENST00000554927 SPDYE6P0CI01 402 aa16.94■□□□□ 0.3
TUBB3-207ENST00000554927 GNAI1P63096 354 aa16.94■□□□□ 0.3
TUBB3-207ENST00000554927 CAP1Q01518 475 aa16.94■□□□□ 0.3
TUBB3-207ENST00000554927 TAF1CQ15572 869 aaPredicted RBP16.94■□□□□ 0.3
TUBB3-207ENST00000554927 CWF19L2Q2TBE0 894 aaKnown RBP16.94■□□□□ 0.3
TUBB3-207ENST00000554927 KSR2Q6VAB6 950 aa16.94■□□□□ 0.3
TUBB3-207ENST00000554927 CERS5Q8N5B7 392 aa16.94■□□□□ 0.3
TUBB3-207ENST00000554927 CHMP4AQ9BY43 222 aa16.94■□□□□ 0.3
TUBB3-207ENST00000554927 ZFYVE28Q9HCC9 887 aa16.94■□□□□ 0.3
TUBB3-207ENST00000554927 IFT57Q9NWB7 429 aa16.94■□□□□ 0.3
TUBB3-207ENST00000554927 TESPA1A2RU30 521 aaPredicted RBP16.93■□□□□ 0.3
TUBB3-207ENST00000554927 ZNF853P0CG23 659 aa16.93■□□□□ 0.3
TUBB3-207ENST00000554927 CHRNDQ07001 517 aa16.93■□□□□ 0.3
TUBB3-207ENST00000554927 RASA3Q14644 834 aa16.93■□□□□ 0.3
TUBB3-207ENST00000554927 C8orf58Q8NAV2 365 aa16.93■□□□□ 0.3
TUBB3-207ENST00000554927 PRMT6Q96LA8 375 aaPredicted RBP16.93■□□□□ 0.3
TUBB3-207ENST00000554927 CHRDL2Q6WN34 429 aa16.92■□□□□ 0.3
TUBB3-207ENST00000554927 JAG2Q9Y219 1238 aa16.92■□□□□ 0.3
TUBB3-207ENST00000554927 CEP290O15078 2479 aa16.91■□□□□ 0.3
TUBB3-207ENST00000554927 TRIOBPQ9H2D6 2365 aa16.91■□□□□ 0.3
TUBB3-207ENST00000554927 CCL15-CCL14A0A0B4J2E2 113 aa16.91■□□□□ 0.3
TUBB3-207ENST00000554927 NEURL1BA8MQ27 555 aa16.91■□□□□ 0.3
TUBB3-207ENST00000554927 SNAP23O00161 211 aa16.91■□□□□ 0.3
TUBB3-207ENST00000554927 WDHD1O75717 1129 aaPredicted RBP16.91■□□□□ 0.3
TUBB3-207ENST00000554927 CCL15Q16663 113 aa16.91■□□□□ 0.3
TUBB3-207ENST00000554927 ZNF804AQ7Z570 1209 aa16.91■□□□□ 0.3
TUBB3-207ENST00000554927 SH3TC2Q8TF17 1288 aa16.91■□□□□ 0.3
TUBB3-207ENST00000554927 H7C1W4 665 aa16.9■□□□□ 0.3
TUBB3-207ENST00000554927 TAF5LO75529 589 aa16.9■□□□□ 0.3
TUBB3-207ENST00000554927 GTF2A2P52657 109 aa16.9■□□□□ 0.3
TUBB3-207ENST00000554927 TNFAIP1Q13829 316 aa16.9■□□□□ 0.3
TUBB3-207ENST00000554927 KIF22Q14807 665 aa16.9■□□□□ 0.3
TUBB3-207ENST00000554927 HELBQ8NG08 1087 aaPredicted RBP16.9■□□□□ 0.3
TUBB3-207ENST00000554927 CNKSR2Q8WXI2 1034 aa16.9■□□□□ 0.3
TUBB3-207ENST00000554927 BRI3BPQ8WY22 251 aa16.9■□□□□ 0.3
TUBB3-207ENST00000554927 DPF3Q92784 378 aa16.9■□□□□ 0.3
TUBB3-207ENST00000554927 OTUD5Q96G74 571 aa16.9■□□□□ 0.3
TUBB3-207ENST00000554927 STK31Q9BXU1 1019 aa16.9■□□□□ 0.3
TUBB3-207ENST00000554927 AOX1Q06278 1338 aa16.9■□□□□ 0.3
TUBB3-207ENST00000554927 CENPFP49454 3210 aa16.89■□□□□ 0.29
TUBB3-207ENST00000554927 MS4A4AQ96JQ5 239 aa16.89■□□□□ 0.29
TUBB3-207ENST00000554927 ANKRD18BA2A2Z9 1011 aa16.88■□□□□ 0.29
TUBB3-207ENST00000554927 ANP32CO43423 234 aa16.88■□□□□ 0.29
TUBB3-207ENST00000554927 ECM2O94769 699 aaPredicted RBP16.88■□□□□ 0.29
TUBB3-207ENST00000554927 FAM43AQ8N2R8 423 aa16.88■□□□□ 0.29
TUBB3-207ENST00000554927 CSADQ9Y600 493 aa16.88■□□□□ 0.29
TUBB3-207ENST00000554927 MYH3P11055 1940 aa16.88■□□□□ 0.29
TUBB3-207ENST00000554927 ZNF316A6NFI3 1004 aaPredicted RBP16.87■□□□□ 0.29
TUBB3-207ENST00000554927 IL1R1P14778 569 aa16.87■□□□□ 0.29
TUBB3-207ENST00000554927 FKBP1AP62942 108 aaKnown RBP16.87■□□□□ 0.29
TUBB3-207ENST00000554927 VGLL4Q14135 290 aa16.87■□□□□ 0.29
TUBB3-207ENST00000554927 TSPYL6Q8N831 410 aa16.87■□□□□ 0.29
TUBB3-207ENST00000554927 PLA2G12BQ9BX93 195 aa16.87■□□□□ 0.29
TUBB3-207ENST00000554927 ZNF70Q9UC06 446 aaPredicted RBP16.87■□□□□ 0.29
TUBB3-207ENST00000554927 CHMP3Q9Y3E7 222 aa16.87■□□□□ 0.29
TUBB3-207ENST00000554927 TCP10L2B9ZVM9 353 aa16.86■□□□□ 0.29
TUBB3-207ENST00000554927 PLIN1O60240 522 aa16.86■□□□□ 0.29
TUBB3-207ENST00000554927 MAP3K9P80192 1104 aa16.86■□□□□ 0.29
TUBB3-207ENST00000554927 GCKRQ14397 625 aa16.86■□□□□ 0.29
TUBB3-207ENST00000554927 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.86■□□□□ 0.29
TUBB3-207ENST00000554927 C15orf52Q6ZUT6 534 aaKnown RBP16.86■□□□□ 0.29
TUBB3-207ENST00000554927 ARHGAP39Q9C0H5 1083 aa16.86■□□□□ 0.29
TUBB3-207ENST00000554927 TDRD3Q9H7E2 651 aaKnown RBP16.86■□□□□ 0.29
TUBB3-207ENST00000554927 RBM27Q9P2N5 1060 aaKnown RBP16.86■□□□□ 0.29
TUBB3-207ENST00000554927 LAMB1P07942 1786 aa16.85■□□□□ 0.29
TUBB3-207ENST00000554927 DLL1O00548 723 aa16.85■□□□□ 0.29
TUBB3-207ENST00000554927 CSF1RP07333 972 aa16.85■□□□□ 0.29
TUBB3-207ENST00000554927 SPDYE2Q495Y8 402 aa16.85■□□□□ 0.29
TUBB3-207ENST00000554927 CDAN1Q8IWY9 1227 aa16.85■□□□□ 0.29
TUBB3-207ENST00000554927 SLC17A8Q8NDX2 589 aa16.85■□□□□ 0.29
TUBB3-207ENST00000554927 MYH16Q9H6N6 1097 aa16.85■□□□□ 0.29
TUBB3-207ENST00000554927 IRS2Q9Y4H2 1338 aa16.85■□□□□ 0.29
TUBB3-207ENST00000554927 TNNI2P48788 182 aa16.84■□□□□ 0.29
TUBB3-207ENST00000554927 LACTBP83111 547 aaPredicted RBP16.84■□□□□ 0.29
TUBB3-207ENST00000554927 IFIT5Q13325 482 aaKnown RBP16.84■□□□□ 0.29
TUBB3-207ENST00000554927 TMEM39BQ9GZU3 492 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms