RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, human

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
XRCC3-208	ENST00000554811	SLC26A6	Q9BXS9	759 aa		13.78	□□□□□ -0.2
XRCC3-208	ENST00000554811	PUS7L	Q9H0K6	701 aa	Known RBP	13.78	□□□□□ -0.2
XRCC3-208	ENST00000554811	ZSWIM4	Q9H7M6	989 aa		13.78	□□□□□ -0.2
XRCC3-208	ENST00000554811	ABCF2	Q9UG63	623 aa		13.78	□□□□□ -0.2
XRCC3-208	ENST00000554811	GPAA1	O43292	621 aa		13.78	□□□□□ -0.2
XRCC3-208	ENST00000554811	SYT10	Q6XYQ8	523 aa		13.78	□□□□□ -0.2
XRCC3-208	ENST00000554811	AIDA	Q96BJ3	306 aa		13.78	□□□□□ -0.2
XRCC3-208	ENST00000554811	CLIC6	Q96NY7	704 aa		13.78	□□□□□ -0.2
XRCC3-208	ENST00000554811	TRMT112	Q9UI30	125 aa	Known RBP	13.78	□□□□□ -0.2
XRCC3-208	ENST00000554811	PIK3C2A	O00443	1686 aa		13.77	□□□□□ -0.2
XRCC3-208	ENST00000554811	MINDY4B	A8MYZ0	360 aa		13.77	□□□□□ -0.2
XRCC3-208	ENST00000554811	PFKFB2	O60825	505 aa		13.77	□□□□□ -0.2
XRCC3-208	ENST00000554811	CTDNEP1	O95476	244 aa		13.77	□□□□□ -0.2
XRCC3-208	ENST00000554811	CPLX3	Q8WVH0	158 aa		13.77	□□□□□ -0.2
XRCC3-208	ENST00000554811	DHX16	O60231	1041 aa	Known RBP	13.77	□□□□□ -0.21
XRCC3-208	ENST00000554811	METAP2	P50579	478 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
XRCC3-208	ENST00000554811	ELF2	Q15723	593 aa		13.77	□□□□□ -0.21
XRCC3-208	ENST00000554811	XPO4	Q9C0E2	1151 aa	Known RBP	13.77	□□□□□ -0.21
XRCC3-208	ENST00000554811	ZNF215	Q9UL58	517 aa	Predicted RBP	13.77	□□□□□ -0.21
XRCC3-208	ENST00000554811	MED23	Q9ULK4	1368 aa		13.77	□□□□□ -0.21
XRCC3-208	ENST00000554811	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.77	□□□□□ -0.21
XRCC3-208	ENST00000554811	DNAJC10	Q8IXB1	793 aa		13.77	□□□□□ -0.21
XRCC3-208	ENST00000554811	MIGA1	Q8NAN2	632 aa		13.77	□□□□□ -0.21
XRCC3-208	ENST00000554811	TRERF1	Q96PN7	1200 aa		13.77	□□□□□ -0.21
XRCC3-208	ENST00000554811	TMOD3	Q9NYL9	352 aa		13.77	□□□□□ -0.21
XRCC3-208	ENST00000554811	CTNNA3	Q9UI47	895 aa		13.77	□□□□□ -0.21
XRCC3-208	ENST00000554811	SETD1A	O15047	1707 aa	Known RBP	13.77	□□□□□ -0.21
XRCC3-208	ENST00000554811	UBE2Q2L	H0YL09	131 aa		13.76	□□□□□ -0.21
XRCC3-208	ENST00000554811	NCOA7	Q8NI08	942 aa		13.76	□□□□□ -0.21
XRCC3-208	ENST00000554811	ELP1	O95163	1332 aa		13.76	□□□□□ -0.21
XRCC3-208	ENST00000554811	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.76	□□□□□ -0.21
XRCC3-208	ENST00000554811	LRRC8A	Q8IWT6	810 aa		13.76	□□□□□ -0.21
XRCC3-208	ENST00000554811	PXDNL	A1KZ92	1463 aa		13.76	□□□□□ -0.21
XRCC3-208	ENST00000554811	URI1	O94763	535 aa	Predicted RBP	13.76	□□□□□ -0.21
XRCC3-208	ENST00000554811	RFX5	P48382	616 aa	Predicted RBP	13.76	□□□□□ -0.21
XRCC3-208	ENST00000554811	TDO2	P48775	406 aa		13.76	□□□□□ -0.21
XRCC3-208	ENST00000554811	SNW1	Q13573	536 aa	Known RBP	13.76	□□□□□ -0.21
XRCC3-208	ENST00000554811	ZNF827	Q17R98	1081 aa		13.76	□□□□□ -0.21
XRCC3-208	ENST00000554811	IFIT3	O14879	490 aa	Known RBP	13.75	□□□□□ -0.21
XRCC3-208	ENST00000554811	SYK	P43405	635 aa		13.75	□□□□□ -0.21
XRCC3-208	ENST00000554811	MNS1	Q8NEH6	495 aa		13.75	□□□□□ -0.21
XRCC3-208	ENST00000554811	C19orf44	Q9H6X5	657 aa		13.75	□□□□□ -0.21
XRCC3-208	ENST00000554811	GOLGA8A	A7E2F4	631 aa		13.75	□□□□□ -0.21
XRCC3-208	ENST00000554811	ATP1A3	P13637	1013 aa		13.75	□□□□□ -0.21
XRCC3-208	ENST00000554811	CTDSPL2	Q05D32	466 aa		13.75	□□□□□ -0.21
XRCC3-208	ENST00000554811	TMEM67	Q5HYA8	995 aa		13.75	□□□□□ -0.21
XRCC3-208	ENST00000554811	TDRD7	Q8NHU6	1098 aa	Known RBP	13.75	□□□□□ -0.21
XRCC3-208	ENST00000554811	KIF18A	Q8NI77	898 aa		13.75	□□□□□ -0.21
XRCC3-208	ENST00000554811	DNAI1	Q9UI46	699 aa		13.75	□□□□□ -0.21
XRCC3-208	ENST00000554811	NPHP4	O75161	1426 aa	Predicted RBP	13.75	□□□□□ -0.21
XRCC3-208	ENST00000554811	UBR1	Q8IWV7	1749 aa		13.75	□□□□□ -0.21
XRCC3-208	ENST00000554811	CARMIL3	Q8ND23	1372 aa		13.75	□□□□□ -0.21
XRCC3-208	ENST00000554811	ZNF202	O95125	648 aa		13.75	□□□□□ -0.21
XRCC3-208	ENST00000554811	PNOC	Q13519	176 aa		13.75	□□□□□ -0.21
XRCC3-208	ENST00000554811	OLFM4	Q6UX06	510 aa		13.75	□□□□□ -0.21
XRCC3-208	ENST00000554811	ATG9A	Q7Z3C6	839 aa		13.74	□□□□□ -0.21
XRCC3-208	ENST00000554811	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
XRCC3-208	ENST00000554811	KCNJ14	Q9UNX9	436 aa		13.74	□□□□□ -0.21
XRCC3-208	ENST00000554811	CTAGE5	O15320	804 aa		13.74	□□□□□ -0.21
XRCC3-208	ENST00000554811	ZMYM1	Q5SVZ6	1142 aa		13.74	□□□□□ -0.21
XRCC3-208	ENST00000554811	TRMT44	Q8IYL2	757 aa	Known RBP	13.74	□□□□□ -0.21
XRCC3-208	ENST00000554811	CNNM3	Q8NE01	707 aa		13.74	□□□□□ -0.21
XRCC3-208	ENST00000554811	NAPB	Q9H115	298 aa		13.74	□□□□□ -0.21
XRCC3-208	ENST00000554811	HELLS	Q9NRZ9	838 aa		13.74	□□□□□ -0.21
XRCC3-208	ENST00000554811	SPTLC3	Q9NUV7	552 aa		13.74	□□□□□ -0.21
XRCC3-208	ENST00000554811	ASAP1	Q9ULH1	1129 aa		13.74	□□□□□ -0.21
XRCC3-208	ENST00000554811	SMTNL1	A8MU46	457 aa		13.74	□□□□□ -0.21
XRCC3-208	ENST00000554811	COBL	O75128	1261 aa		13.74	□□□□□ -0.21
XRCC3-208	ENST00000554811	TULP1	O00294	542 aa	Predicted RBP	13.73	□□□□□ -0.21
XRCC3-208	ENST00000554811	RASSF8	Q8NHQ8	419 aa		13.73	□□□□□ -0.21
XRCC3-208	ENST00000554811	ANKAR	Q7Z5J8	1434 aa		13.73	□□□□□ -0.21
XRCC3-208	ENST00000554811	IARS	P41252	1262 aa	Known RBP	13.73	□□□□□ -0.21
XRCC3-208	ENST00000554811	FOXO4	P98177	505 aa		13.73	□□□□□ -0.21
XRCC3-208	ENST00000554811	NCBP1	Q09161	790 aa	Known RBP	13.73	□□□□□ -0.21
XRCC3-208	ENST00000554811	SENP2	Q9HC62	589 aa		13.73	□□□□□ -0.21
XRCC3-208	ENST00000554811	JAG2	Q9Y219	1238 aa		13.73	□□□□□ -0.21
XRCC3-208	ENST00000554811	PFKFB1	P16118	471 aa		13.72	□□□□□ -0.21
XRCC3-208	ENST00000554811	ITGA6	P23229	1130 aa		13.72	□□□□□ -0.21
XRCC3-208	ENST00000554811	STX17	P56962	302 aa		13.72	□□□□□ -0.21
XRCC3-208	ENST00000554811	UBASH3A	P57075	661 aa		13.72	□□□□□ -0.21
XRCC3-208	ENST00000554811	MYSM1	Q5VVJ2	828 aa		13.72	□□□□□ -0.21
XRCC3-208	ENST00000554811	BICDL1	Q6ZP65	573 aa		13.72	□□□□□ -0.21
XRCC3-208	ENST00000554811	MPHOSPH8	Q99549	860 aa		13.72	□□□□□ -0.21
XRCC3-208	ENST00000554811	AKAP2	Q9Y2D5	859 aa		13.72	□□□□□ -0.21
XRCC3-208	ENST00000554811	POLR3G	O15318	223 aa	Predicted RBP	13.72	□□□□□ -0.21
XRCC3-208	ENST00000554811	GTF2E1	P29083	439 aa	Predicted RBP	13.72	□□□□□ -0.21
XRCC3-208	ENST00000554811	AKAP17A	Q02040	695 aa	Known RBP	13.72	□□□□□ -0.21
XRCC3-208	ENST00000554811	SAFB	Q15424	915 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
XRCC3-208	ENST00000554811	NAA16	Q6N069	864 aa	Predicted RBP	13.72	□□□□□ -0.21
XRCC3-208	ENST00000554811	UTP14A	Q9BVJ6	771 aa	Known RBP	13.72	□□□□□ -0.21
XRCC3-208	ENST00000554811	GREM2	Q9H772	168 aa		13.72	□□□□□ -0.21
XRCC3-208	ENST00000554811	RCOR1	Q9UKL0	485 aa		13.72	□□□□□ -0.21
XRCC3-208	ENST00000554811	KIF28P	B7ZC32	967 aa		13.72	□□□□□ -0.21
XRCC3-208	ENST00000554811	ANO1	Q5XXA6	986 aa		13.72	□□□□□ -0.21
XRCC3-208	ENST00000554811	PLA2G4D	Q86XP0	818 aa		13.72	□□□□□ -0.21
XRCC3-208	ENST00000554811	STAM	Q92783	540 aa		13.72	□□□□□ -0.21
XRCC3-208	ENST00000554811	LRP2BP	Q9P2M1	347 aa		13.72	□□□□□ -0.21
XRCC3-208	ENST00000554811	FAM208A	Q9UK61	1670 aa	Known RBP	13.72	□□□□□ -0.21
XRCC3-208	ENST00000554811	AFM	P43652	599 aa		13.71	□□□□□ -0.21
XRCC3-208	ENST00000554811	GRAMD1C	Q8IYS0	662 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms