RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 XAGE2Q96GT9 111 aa14.88□□□□□ -0.03
RIPK3-204ENST00000554756 UTRNP46939 3433 aa14.87□□□□□ -0.03
RIPK3-204ENST00000554756 IQCA1LA6NCM1 817 aa14.87□□□□□ -0.03
RIPK3-204ENST00000554756 PHKA1P46020 1223 aa14.87□□□□□ -0.03
RIPK3-204ENST00000554756 TNNI3KQ59H18 835 aa14.87□□□□□ -0.03
RIPK3-204ENST00000554756 STRIP1Q5VSL9 837 aa14.87□□□□□ -0.03
RIPK3-204ENST00000554756 ERC1Q8IUD2 1116 aa14.87□□□□□ -0.03
RIPK3-204ENST00000554756 RHPN1Q8TCX5 695 aa14.87□□□□□ -0.03
RIPK3-204ENST00000554756 TAF1DQ9H5J8 278 aaPredicted RBP14.87□□□□□ -0.03
RIPK3-204ENST00000554756 IL1RAPL2Q9NP60 686 aa14.87□□□□□ -0.03
RIPK3-204ENST00000554756 GPRC5DQ9NZD1 345 aa14.87□□□□□ -0.03
RIPK3-204ENST00000554756 FPGT-TNNI3KV9GXZ4 949 aa14.87□□□□□ -0.03
RIPK3-204ENST00000554756 EPHX2P34913 555 aa14.86□□□□□ -0.03
RIPK3-204ENST00000554756 GORABQ5T7V8 394 aa14.86□□□□□ -0.03
RIPK3-204ENST00000554756 MICALL2Q8IY33 904 aa14.86□□□□□ -0.03
RIPK3-204ENST00000554756 C16orf71Q8IYS4 520 aaPredicted RBP14.86□□□□□ -0.03
RIPK3-204ENST00000554756 CNOT7Q9UIV1 285 aaKnown RBP14.86□□□□□ -0.03
RIPK3-204ENST00000554756 WDR90Q96KV7 1748 aa14.86□□□□□ -0.03
RIPK3-204ENST00000554756 ZNF609O15014 1411 aa14.86□□□□□ -0.03
RIPK3-204ENST00000554756 RAB11FIP3O75154 756 aa14.85□□□□□ -0.03
RIPK3-204ENST00000554756 RPS12P25398 132 aaKnown RBP14.85□□□□□ -0.03
RIPK3-204ENST00000554756 EAPPQ56P03 285 aaPredicted RBP14.85□□□□□ -0.03
RIPK3-204ENST00000554756 CCDC102BQ68D86 513 aa14.85□□□□□ -0.03
RIPK3-204ENST00000554756 CCDC8Q9H0W5 538 aaPredicted RBP14.85□□□□□ -0.03
RIPK3-204ENST00000554756 GPR108Q9NPR9 543 aa14.85□□□□□ -0.03
RIPK3-204ENST00000554756 SCN9AQ15858 1988 aa14.85□□□□□ -0.03
RIPK3-204ENST00000554756 DPF2Q92785 391 aa14.85□□□□□ -0.03
RIPK3-204ENST00000554756 EAF2Q96CJ1 260 aaPredicted RBP14.85□□□□□ -0.03
RIPK3-204ENST00000554756 KIF1BPQ96EK5 621 aa14.85□□□□□ -0.03
RIPK3-204ENST00000554756 DBNDD2Q9BQY9 259 aa14.85□□□□□ -0.03
RIPK3-204ENST00000554756 GNL3LQ9NVN8 582 aaKnown RBP14.85□□□□□ -0.03
RIPK3-204ENST00000554756 H7C1D1 291 aa14.84□□□□□ -0.03
RIPK3-204ENST00000554756 RBM26Q5T8P6 1007 aaKnown RBP14.84□□□□□ -0.03
RIPK3-204ENST00000554756 AACSQ86V21 672 aa14.84□□□□□ -0.03
RIPK3-204ENST00000554756 CERS5Q8N5B7 392 aa14.84□□□□□ -0.03
RIPK3-204ENST00000554756 AGBL3Q8NEM8 1001 aa14.84□□□□□ -0.03
RIPK3-204ENST00000554756 GMLQ99445 158 aa14.84□□□□□ -0.03
RIPK3-204ENST00000554756 DCTPP1Q9H773 170 aa14.84□□□□□ -0.03
RIPK3-204ENST00000554756 TLR7Q9NYK1 1049 aaKnown RBP14.84□□□□□ -0.03
RIPK3-204ENST00000554756 FAM205AQ6ZU69 1335 aa14.84□□□□□ -0.03
RIPK3-204ENST00000554756 F8W031 263 aaPredicted RBP14.83□□□□□ -0.03
RIPK3-204ENST00000554756 SMARCA5O60264 1052 aaPredicted RBP14.83□□□□□ -0.03
RIPK3-204ENST00000554756 POTEIP0CG38 1075 aa14.83□□□□□ -0.03
RIPK3-204ENST00000554756 POTEJP0CG39 1038 aa14.83□□□□□ -0.03
RIPK3-204ENST00000554756 SAMD7Q7Z3H4 446 aa14.83□□□□□ -0.03
RIPK3-204ENST00000554756 KIAA0825Q8IV33 1275 aa14.83□□□□□ -0.03
RIPK3-204ENST00000554756 GCC1Q96CN9 775 aa14.83□□□□□ -0.03
RIPK3-204ENST00000554756 USP17L8P0C7I0 530 aa14.83□□□□□ -0.04
RIPK3-204ENST00000554756 TBC1D10BQ4KMP7 808 aaPredicted RBP14.83□□□□□ -0.04
RIPK3-204ENST00000554756 MFSD14BQ5SR56 506 aa14.83□□□□□ -0.04
RIPK3-204ENST00000554756 CLASRPQ8N2M8 674 aaKnown RBP14.83□□□□□ -0.04
RIPK3-204ENST00000554756 UPF2Q9HAU5 1272 aaKnown RBP14.83□□□□□ -0.04
RIPK3-204ENST00000554756 ADARB2Q9NS39 739 aaKnown RBP14.83□□□□□ -0.04
RIPK3-204ENST00000554756 CLEC11AQ9Y240 323 aa14.83□□□□□ -0.04
RIPK3-204ENST00000554756 MYO3BQ8WXR4 1341 aa14.82□□□□□ -0.04
RIPK3-204ENST00000554756 TRPM4Q8TD43 1214 aa14.82□□□□□ -0.04
RIPK3-204ENST00000554756 LRRCC1Q9C099 1032 aa14.82□□□□□ -0.04
RIPK3-204ENST00000554756 DBNLQ9UJU6 430 aaKnown RBP14.82□□□□□ -0.04
RIPK3-204ENST00000554756 EGFRP00533 1210 aa14.81□□□□□ -0.04
RIPK3-204ENST00000554756 GRIK5Q16478 980 aa14.81□□□□□ -0.04
RIPK3-204ENST00000554756 TTC39AQ5SRH9 613 aa14.81□□□□□ -0.04
RIPK3-204ENST00000554756 DENND2AQ9ULE3 1009 aa14.81□□□□□ -0.04
RIPK3-204ENST00000554756 COL1A1P02452 1464 aaPredicted RBP14.81□□□□□ -0.04
RIPK3-204ENST00000554756 TOMM70O94826 608 aa14.8□□□□□ -0.04
RIPK3-204ENST00000554756 HIRAP54198 1017 aaPredicted RBP14.8□□□□□ -0.04
RIPK3-204ENST00000554756 FKBP1AP62942 108 aaKnown RBP14.8□□□□□ -0.04
RIPK3-204ENST00000554756 RASGRF1Q13972 1273 aa14.8□□□□□ -0.04
RIPK3-204ENST00000554756 CCDC158Q5M9N0 1113 aa14.8□□□□□ -0.04
RIPK3-204ENST00000554756 USP50Q70EL3 339 aaPredicted RBP14.8□□□□□ -0.04
RIPK3-204ENST00000554756 PNMA8AQ86V59 439 aaPredicted RBP14.8□□□□□ -0.04
RIPK3-204ENST00000554756 SEMA3EO15041 775 aa14.8□□□□□ -0.04
RIPK3-204ENST00000554756 IFIT2P09913 472 aaKnown RBP14.8□□□□□ -0.04
RIPK3-204ENST00000554756 UQCRFS1P1P0C7P4 283 aa14.8□□□□□ -0.04
RIPK3-204ENST00000554756 ZNF280AP59817 542 aaPredicted RBP14.8□□□□□ -0.04
RIPK3-204ENST00000554756 NUCB1Q02818 461 aa14.8□□□□□ -0.04
RIPK3-204ENST00000554756 SCARF1Q14162 830 aa14.8□□□□□ -0.04
RIPK3-204ENST00000554756 KIF4BQ2VIQ3 1234 aa14.8□□□□□ -0.04
RIPK3-204ENST00000554756 OGFOD1Q8N543 542 aa14.8□□□□□ -0.04
RIPK3-204ENST00000554756 DAXXQ9UER7 740 aaPredicted RBP14.8□□□□□ -0.04
RIPK3-204ENST00000554756 IFFO2Q5TF58 517 aa14.79□□□□□ -0.04
RIPK3-204ENST00000554756 PI16Q6UXB8 463 aa14.79□□□□□ -0.04
RIPK3-204ENST00000554756 LDHDQ86WU2 507 aa14.79□□□□□ -0.04
RIPK3-204ENST00000554756 WDR66Q8TBY9 1149 aa14.79□□□□□ -0.04
RIPK3-204ENST00000554756 TBC1D22AQ8WUA7 517 aa14.79□□□□□ -0.04
RIPK3-204ENST00000554756 MYOZ2Q9NPC6 264 aa14.79□□□□□ -0.04
RIPK3-204ENST00000554756 SNRKQ9NRH2 765 aa14.79□□□□□ -0.04
RIPK3-204ENST00000554756 HMG20BQ9P0W2 317 aa14.79□□□□□ -0.04
RIPK3-204ENST00000554756 HDAC9Q9UKV0 1011 aa14.79□□□□□ -0.04
RIPK3-204ENST00000554756 ARAP2Q8WZ64 1704 aa14.79□□□□□ -0.04
RIPK3-204ENST00000554756 ARID4AP29374 1257 aaPredicted RBP14.78□□□□□ -0.04
RIPK3-204ENST00000554756 SPATA5Q8NB90 893 aa14.78□□□□□ -0.04
RIPK3-204ENST00000554756 RBM46Q8TBY0 533 aaKnown RBP14.78□□□□□ -0.04
RIPK3-204ENST00000554756 TTF2Q9UNY4 1162 aaKnown RBP14.78□□□□□ -0.04
RIPK3-204ENST00000554756 SCN4AP35499 1836 aa14.78□□□□□ -0.04
RIPK3-204ENST00000554756 MCAMP43121 646 aa14.78□□□□□ -0.04
RIPK3-204ENST00000554756 MAP1SQ66K74 1059 aaPredicted RBP14.78□□□□□ -0.04
RIPK3-204ENST00000554756 CHADLQ6NUI6 762 aa14.78□□□□□ -0.04
RIPK3-204ENST00000554756 ASTN2O75129 1339 aaPredicted RBP14.77□□□□□ -0.04
RIPK3-204ENST00000554756 ZNF646O15015 1829 aaPredicted RBP14.77□□□□□ -0.05
RIPK3-204ENST00000554756 PSME4Q14997 1843 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms