RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 CCDC174Q6PII3 467 aa15.81■□□□□ 0.12
VTI1B-204ENST00000554659 MICALL1Q8N3F8 863 aa15.81■□□□□ 0.12
VTI1B-204ENST00000554659 NBPF11Q86T75 865 aa15.81■□□□□ 0.12
VTI1B-204ENST00000554659 HELLSQ9NRZ9 838 aa15.81■□□□□ 0.12
VTI1B-204ENST00000554659 ZNF569Q5MCW4 686 aa15.8■□□□□ 0.12
VTI1B-204ENST00000554659 FERMT2Q96AC1 680 aa15.8■□□□□ 0.12
VTI1B-204ENST00000554659 RPS6KB1P23443 525 aa15.8■□□□□ 0.12
VTI1B-204ENST00000554659 KARSQ15046 597 aaKnown RBP15.8■□□□□ 0.12
VTI1B-204ENST00000554659 USP37Q86T82 979 aa15.8■□□□□ 0.12
VTI1B-204ENST00000554659 MMRN2Q9H8L6 949 aa15.8■□□□□ 0.12
VTI1B-204ENST00000554659 UBXN1Q04323 297 aa15.8■□□□□ 0.12
VTI1B-204ENST00000554659 NAA16Q6N069 864 aaPredicted RBP15.8■□□□□ 0.12
VTI1B-204ENST00000554659 LZTFL1Q9NQ48 299 aa15.8■□□□□ 0.12
VTI1B-204ENST00000554659 RRAGDQ9NQL2 400 aaPredicted RBP15.8■□□□□ 0.12
VTI1B-204ENST00000554659 SLC39A6Q13433 755 aa15.8■□□□□ 0.12
VTI1B-204ENST00000554659 KRT24Q2M2I5 525 aa15.8■□□□□ 0.12
VTI1B-204ENST00000554659 TERF1P54274 439 aa15.79■□□□□ 0.12
VTI1B-204ENST00000554659 TFCP2Q12800 502 aa15.79■□□□□ 0.12
VTI1B-204ENST00000554659 MSL1Q68DK7 614 aa15.79■□□□□ 0.12
VTI1B-204ENST00000554659 CEP57Q86XR8 500 aa15.79■□□□□ 0.12
VTI1B-204ENST00000554659 BAG1Q99933 345 aaPredicted RBP15.79■□□□□ 0.12
VTI1B-204ENST00000554659 C6orf50Q9HD87 102 aa15.79■□□□□ 0.12
VTI1B-204ENST00000554659 VPS18Q9P253 973 aa15.79■□□□□ 0.12
VTI1B-204ENST00000554659 GUCA1BQ9UMX6 200 aa15.79■□□□□ 0.12
VTI1B-204ENST00000554659 FERP16591 822 aa15.79■□□□□ 0.12
VTI1B-204ENST00000554659 NAPAP54920 295 aa15.79■□□□□ 0.12
VTI1B-204ENST00000554659 SMAP1Q8IYB5 467 aaPredicted RBP15.79■□□□□ 0.12
VTI1B-204ENST00000554659 PAIP2Q9BPZ3 127 aaKnown RBP15.79■□□□□ 0.12
VTI1B-204ENST00000554659 LLPHQ9BRT6 129 aaKnown RBP15.79■□□□□ 0.12
VTI1B-204ENST00000554659 ZNF608Q9ULD9 1512 aaPredicted RBP15.79■□□□□ 0.12
VTI1B-204ENST00000554659 EBAG9O00559 213 aa15.79■□□□□ 0.12
VTI1B-204ENST00000554659 ACTN2P35609 894 aa15.79■□□□□ 0.12
VTI1B-204ENST00000554659 CHMP4BP1P59074 171 aa15.79■□□□□ 0.12
VTI1B-204ENST00000554659 CWF19L2Q2TBE0 894 aaKnown RBP15.79■□□□□ 0.12
VTI1B-204ENST00000554659 CCDC129Q6ZRS4 1044 aa15.79■□□□□ 0.12
VTI1B-204ENST00000554659 ZCRB1Q8TBF4 217 aaKnown RBP15.79■□□□□ 0.12
VTI1B-204ENST00000554659 UTP14AQ9BVJ6 771 aaKnown RBP15.79■□□□□ 0.12
VTI1B-204ENST00000554659 CLSTN2Q9H4D0 955 aa15.79■□□□□ 0.12
VTI1B-204ENST00000554659 LUC7L2Q9Y383 392 aaKnown RBP15.79■□□□□ 0.12
VTI1B-204ENST00000554659 MXRA7P84157 204 aa15.78■□□□□ 0.12
VTI1B-204ENST00000554659 IQUBQ8NA54 791 aa15.78■□□□□ 0.12
VTI1B-204ENST00000554659 UHRF1BP1LA0JNW5 1464 aa15.78■□□□□ 0.12
VTI1B-204ENST00000554659 RIMS2Q9UQ26 1411 aa15.78■□□□□ 0.12
VTI1B-204ENST00000554659 KRT13P13646 458 aa15.78■□□□□ 0.12
VTI1B-204ENST00000554659 CHST3Q7LGC8 479 aa15.78■□□□□ 0.12
VTI1B-204ENST00000554659 HDXQ7Z353 690 aa15.78■□□□□ 0.12
VTI1B-204ENST00000554659 CCDC77Q9BR77 488 aa15.78■□□□□ 0.12
VTI1B-204ENST00000554659 MAGEB6P1A0A0J9YX57 407 aa15.78■□□□□ 0.12
VTI1B-204ENST00000554659 CCDC160A6NGH7 325 aa15.78■□□□□ 0.12
VTI1B-204ENST00000554659 TRMT1LQ7Z2T5 733 aaKnown RBP15.78■□□□□ 0.12
VTI1B-204ENST00000554659 ARFGAP2Q8N6H7 521 aa15.78■□□□□ 0.12
VTI1B-204ENST00000554659 PUF60Q9UHX1 559 aaKnown RBP15.78■□□□□ 0.12
VTI1B-204ENST00000554659 AKR1B15C9JRZ8 316 aaPredicted RBP15.78■□□□□ 0.12
VTI1B-204ENST00000554659 ZRANB1Q9UGI0 708 aa15.78■□□□□ 0.12
VTI1B-204ENST00000554659 CEBPAP49715 358 aaPredicted RBP15.77■□□□□ 0.12
VTI1B-204ENST00000554659 STX17P56962 302 aa15.77■□□□□ 0.12
VTI1B-204ENST00000554659 BABAM1Q9NWV8 329 aa15.77■□□□□ 0.12
VTI1B-204ENST00000554659 SAMM50Q9Y512 469 aa15.77■□□□□ 0.12
VTI1B-204ENST00000554659 ANKS4BQ8N8V4 417 aa15.77■□□□□ 0.12
VTI1B-204ENST00000554659 NEK11Q8NG66 645 aa15.77■□□□□ 0.12
VTI1B-204ENST00000554659 TSGA10Q9BZW7 698 aa15.77■□□□□ 0.12
VTI1B-204ENST00000554659 BLMP54132 1417 aaPredicted RBP15.77■□□□□ 0.12
VTI1B-204ENST00000554659 KIF4AO95239 1232 aa15.77■□□□□ 0.12
VTI1B-204ENST00000554659 VAV2P52735 878 aa15.77■□□□□ 0.12
VTI1B-204ENST00000554659 TUBB2AQ13885 445 aa15.77■□□□□ 0.12
VTI1B-204ENST00000554659 SLC4A8Q2Y0W8 1093 aa15.77■□□□□ 0.12
VTI1B-204ENST00000554659 PSMD1Q99460 953 aa15.77■□□□□ 0.12
VTI1B-204ENST00000554659 TUBB2BQ9BVA1 445 aa15.77■□□□□ 0.12
VTI1B-204ENST00000554659 IGSF3O75054 1194 aa15.77■□□□□ 0.11
VTI1B-204ENST00000554659 A0A1B0GVL5 298 aa15.76■□□□□ 0.11
VTI1B-204ENST00000554659 KRT79Q5XKE5 535 aa15.76■□□□□ 0.11
VTI1B-204ENST00000554659 SNX14Q9Y5W7 946 aa15.76■□□□□ 0.11
VTI1B-204ENST00000554659 CTTNBP2Q8WZ74 1663 aa15.76■□□□□ 0.11
VTI1B-204ENST00000554659 CAPZA3Q96KX2 299 aa15.76■□□□□ 0.11
VTI1B-204ENST00000554659 FERMT1Q9BQL6 677 aa15.76■□□□□ 0.11
VTI1B-204ENST00000554659 EVCP57679 992 aa15.76■□□□□ 0.11
VTI1B-204ENST00000554659 ZBTB9Q96C00 473 aa15.76■□□□□ 0.11
VTI1B-204ENST00000554659 TTC14Q96N46 770 aa15.76■□□□□ 0.11
VTI1B-204ENST00000554659 TSNARE1Q96NA8 513 aa15.76■□□□□ 0.11
VTI1B-204ENST00000554659 BICC1Q9H694 974 aaKnown RBP15.76■□□□□ 0.11
VTI1B-204ENST00000554659 RHOXF2BP0C7M4 288 aa15.76■□□□□ 0.11
VTI1B-204ENST00000554659 RHOXF2Q9BQY4 288 aa15.76■□□□□ 0.11
VTI1B-204ENST00000554659 PHF23Q9BUL5 403 aaPredicted RBP15.76■□□□□ 0.11
VTI1B-204ENST00000554659 IQCGQ9H095 443 aaKnown RBP15.76■□□□□ 0.11
VTI1B-204ENST00000554659 ZNF518AQ6AHZ1 1483 aa15.76■□□□□ 0.11
VTI1B-204ENST00000554659 SLC27A2O14975 620 aa15.76■□□□□ 0.11
VTI1B-204ENST00000554659 CHRNA2Q15822 529 aa15.76■□□□□ 0.11
VTI1B-204ENST00000554659 CCDC121Q6ZUS5 278 aa15.76■□□□□ 0.11
VTI1B-204ENST00000554659 RBM28Q9NW13 759 aaKnown RBP15.76■□□□□ 0.11
VTI1B-204ENST00000554659 PPP1R2P41236 205 aa15.75■□□□□ 0.11
VTI1B-204ENST00000554659 TRIM14Q14142 442 aa15.75■□□□□ 0.11
VTI1B-204ENST00000554659 CPA1P15085 419 aa15.75■□□□□ 0.11
VTI1B-204ENST00000554659 RILPL1Q5EBL4 403 aa15.75■□□□□ 0.11
VTI1B-204ENST00000554659 DAAM2Q86T65 1068 aa15.75■□□□□ 0.11
VTI1B-204ENST00000554659 OTUD6BQ8N6M0 293 aa15.75■□□□□ 0.11
VTI1B-204ENST00000554659 MYRIPQ8NFW9 859 aa15.75■□□□□ 0.11
VTI1B-204ENST00000554659 OTUD7AQ8TE49 926 aaPredicted RBP15.75■□□□□ 0.11
VTI1B-204ENST00000554659 EYA1Q99502 592 aa15.75■□□□□ 0.11
VTI1B-204ENST00000554659 ZNF75DP51815 510 aa15.75■□□□□ 0.11
VTI1B-204ENST00000554659 PPP2R3AQ06190 1150 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms