RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 SFSWAPQ12872 951 aaKnown RBP7.31□□□□□ -1.24
ATXN3-228ENST00000554592 OCLNQ16625 522 aa7.31□□□□□ -1.24
ATXN3-228ENST00000554592 SLCO4C1Q6ZQN7 724 aa7.31□□□□□ -1.24
ATXN3-228ENST00000554592 KRT28Q7Z3Y7 464 aa7.31□□□□□ -1.24
ATXN3-228ENST00000554592 XRN1Q8IZH2 1706 aaKnown RBP7.31□□□□□ -1.24
ATXN3-228ENST00000554592 GOLGA6L1Q8N7Z2 621 aa7.31□□□□□ -1.24
ATXN3-228ENST00000554592 GALNT6Q8NCL4 622 aa7.31□□□□□ -1.24
ATXN3-228ENST00000554592 MDFIQ99750 246 aa7.31□□□□□ -1.24
ATXN3-228ENST00000554592 ENAMQ9NRM1 1142 aa7.31□□□□□ -1.24
ATXN3-228ENST00000554592 DMGDHQ9UI17 866 aaKnown RBP7.31□□□□□ -1.24
ATXN3-228ENST00000554592 TYRO3Q06418 890 aa7.3□□□□□ -1.24
ATXN3-228ENST00000554592 R3HDM1Q15032 1099 aaKnown RBP7.3□□□□□ -1.24
ATXN3-228ENST00000554592 RTN1Q16799 776 aa7.3□□□□□ -1.24
ATXN3-228ENST00000554592 SWI5Q1ZZU3 235 aa7.3□□□□□ -1.24
ATXN3-228ENST00000554592 TMEM164Q5U3C3 297 aa7.3□□□□□ -1.24
ATXN3-228ENST00000554592 AEBP1Q8IUX7 1158 aa7.3□□□□□ -1.24
ATXN3-228ENST00000554592 EDARADDQ8WWZ3 215 aa7.3□□□□□ -1.24
ATXN3-228ENST00000554592 AVENQ9NQS1 362 aaPredicted RBP7.3□□□□□ -1.24
ATXN3-228ENST00000554592 ANKIB1Q9P2G1 1089 aa7.3□□□□□ -1.24
ATXN3-228ENST00000554592 SLIT2O94813 1529 aa7.3□□□□□ -1.24
ATXN3-228ENST00000554592 EPXP11678 715 aa7.29□□□□□ -1.24
ATXN3-228ENST00000554592 YY1P25490 414 aa7.29□□□□□ -1.24
ATXN3-228ENST00000554592 ITGAEP38570 1179 aa7.29□□□□□ -1.24
ATXN3-228ENST00000554592 FKBP5Q13451 457 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-228ENST00000554592 SUZ12Q15022 739 aaKnown RBP7.29□□□□□ -1.24
ATXN3-228ENST00000554592 ZNF468Q5VIY5 522 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-228ENST00000554592 WAPLQ7Z5K2 1190 aa7.29□□□□□ -1.24
ATXN3-228ENST00000554592 FCHSD1Q86WN1 690 aa7.29□□□□□ -1.24
ATXN3-228ENST00000554592 SLC30A3Q99726 388 aa7.29□□□□□ -1.24
ATXN3-228ENST00000554592 NEUROD4Q9HD90 331 aa7.29□□□□□ -1.24
ATXN3-228ENST00000554592 DNMT3AQ9Y6K1 912 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-228ENST00000554592 LAMC1P11047 1609 aa7.29□□□□□ -1.24
ATXN3-228ENST00000554592 CNTNAP5Q8WYK1 1306 aa7.28□□□□□ -1.24
ATXN3-228ENST00000554592 PRAG1Q86YV5 1406 aa7.28□□□□□ -1.24
ATXN3-228ENST00000554592 NRXN3Q9Y4C0 1643 aa7.28□□□□□ -1.24
ATXN3-228ENST00000554592 ZBTB7CA1YPR0 619 aa7.28□□□□□ -1.24
ATXN3-228ENST00000554592 FAM83GA6ND36 823 aa7.28□□□□□ -1.24
ATXN3-228ENST00000554592 NEURL1BA8MQ27 555 aa7.28□□□□□ -1.24
ATXN3-228ENST00000554592 IER5Q5VY09 327 aa7.28□□□□□ -1.24
ATXN3-228ENST00000554592 BTLAQ7Z6A9 289 aa7.28□□□□□ -1.24
ATXN3-228ENST00000554592 PRIMPOLQ96LW4 560 aa7.28□□□□□ -1.24
ATXN3-228ENST00000554592 BRD7Q9NPI1 651 aa7.28□□□□□ -1.24
ATXN3-228ENST00000554592 PODXL2Q9NZ53 605 aa7.28□□□□□ -1.24
ATXN3-228ENST00000554592 STK26Q9P289 416 aa7.28□□□□□ -1.24
ATXN3-228ENST00000554592 MYO5BQ9ULV0 1848 aa7.28□□□□□ -1.24
ATXN3-228ENST00000554592 PXDNQ92626 1479 aa7.28□□□□□ -1.24
ATXN3-228ENST00000554592 E9PCH4 1651 aa7.28□□□□□ -1.24
ATXN3-228ENST00000554592 GRNP28799 593 aaKnown RBP7.27□□□□□ -1.25
ATXN3-228ENST00000554592 MARSP56192 900 aaKnown RBP7.27□□□□□ -1.25
ATXN3-228ENST00000554592 SNRPNP63162 240 aaKnown RBP7.27□□□□□ -1.25
ATXN3-228ENST00000554592 RASSF7Q02833 373 aa7.27□□□□□ -1.25
ATXN3-228ENST00000554592 TMEM151AQ8N4L1 468 aa7.27□□□□□ -1.25
ATXN3-228ENST00000554592 NEDD1Q8NHV4 660 aa7.27□□□□□ -1.25
ATXN3-228ENST00000554592 SCARF2Q96GP6 870 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-228ENST00000554592 MYO19Q96H55 970 aa7.27□□□□□ -1.25
ATXN3-228ENST00000554592 BTBD6Q96KE9 485 aa7.27□□□□□ -1.25
ATXN3-228ENST00000554592 LRFN2Q9ULH4 789 aa7.27□□□□□ -1.25
ATXN3-228ENST00000554592 COL22A1Q8NFW1 1626 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-228ENST00000554592 GDF11O95390 407 aa7.26□□□□□ -1.25
ATXN3-228ENST00000554592 BRD1O95696 1058 aa7.26□□□□□ -1.25
ATXN3-228ENST00000554592 ADH6P28332 368 aa7.26□□□□□ -1.25
ATXN3-228ENST00000554592 PCBP4P57723 403 aaKnown RBP7.26□□□□□ -1.25
ATXN3-228ENST00000554592 CEP63Q96MT8 703 aa7.26□□□□□ -1.25
ATXN3-228ENST00000554592 KLK14Q9P0G3 267 aa7.26□□□□□ -1.25
ATXN3-228ENST00000554592 IQGAP3Q86VI3 1631 aa7.26□□□□□ -1.25
ATXN3-228ENST00000554592 ABCC11Q96J66 1382 aa7.25□□□□□ -1.25
ATXN3-228ENST00000554592 TGFBR3LH3BV60 316 aa7.25□□□□□ -1.25
ATXN3-228ENST00000554592 RNF225M0QZC1 329 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-228ENST00000554592 PRMT3O60678 531 aa7.25□□□□□ -1.25
ATXN3-228ENST00000554592 IRS1P35568 1242 aa7.25□□□□□ -1.25
ATXN3-228ENST00000554592 EZH2Q15910 746 aaKnown RBP7.25□□□□□ -1.25
ATXN3-228ENST00000554592 HIF1AQ16665 826 aa7.25□□□□□ -1.25
ATXN3-228ENST00000554592 LINC00114Q6XXX2 140 aa7.25□□□□□ -1.25
ATXN3-228ENST00000554592 SYT9Q86SS6 491 aa7.25□□□□□ -1.25
ATXN3-228ENST00000554592 CLP1Q92989 425 aaKnown RBP7.25□□□□□ -1.25
ATXN3-228ENST00000554592 CAMKK2Q96RR4 588 aa7.25□□□□□ -1.25
ATXN3-228ENST00000554592 BTG4Q9NY30 223 aa7.25□□□□□ -1.25
ATXN3-228ENST00000554592 KCNH4Q9UQ05 1017 aa7.25□□□□□ -1.25
ATXN3-228ENST00000554592 NEXMIFQ5QGS0 1516 aa7.25□□□□□ -1.25
ATXN3-228ENST00000554592 CCDC144AA2RUR9 1427 aa7.25□□□□□ -1.25
ATXN3-228ENST00000554592 NAIPQ13075 1403 aa7.25□□□□□ -1.25
ATXN3-228ENST00000554592 GLI3P10071 1580 aa7.25□□□□□ -1.25
ATXN3-228ENST00000554592 SBNO1A3KN83 1393 aa7.24□□□□□ -1.25
ATXN3-228ENST00000554592 LRP5O75197 1615 aa7.24□□□□□ -1.25
ATXN3-228ENST00000554592 SPEM2Q0P670 501 aa7.24□□□□□ -1.25
ATXN3-228ENST00000554592 DGKZQ13574 1117 aa7.24□□□□□ -1.25
ATXN3-228ENST00000554592 NBPF8Q3BBV2 869 aa7.24□□□□□ -1.25
ATXN3-228ENST00000554592 TMEM132EQ6IEE7 984 aa7.24□□□□□ -1.25
ATXN3-228ENST00000554592 FAM196AQ6ZSG2 479 aa7.24□□□□□ -1.25
ATXN3-228ENST00000554592 CAPN12Q6ZSI9 719 aa7.24□□□□□ -1.25
ATXN3-228ENST00000554592 CXXC1Q9P0U4 656 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-228ENST00000554592 PRR12Q9ULL5 1215 aa7.24□□□□□ -1.25
ATXN3-228ENST00000554592 ADGRF5Q8IZF2 1346 aa7.24□□□□□ -1.25
ATXN3-228ENST00000554592 NALCNQ8IZF0 1738 aa7.24□□□□□ -1.25
ATXN3-228ENST00000554592 ARHGEF10O15013 1369 aa7.23□□□□□ -1.25
ATXN3-228ENST00000554592 EP400Q96L91 3159 aa7.23□□□□□ -1.25
ATXN3-228ENST00000554592 SIN3BO75182 1162 aa7.23□□□□□ -1.25
ATXN3-228ENST00000554592 APBA3O96018 575 aa7.23□□□□□ -1.25
ATXN3-228ENST00000554592 INPP5BP32019 993 aa7.23□□□□□ -1.25
ATXN3-228ENST00000554592 C11orf91Q3C1V1 193 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms